| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1660446 | 62 (1.050) | 8 (0.150) | 4/90 | NT | 12.8% | coding (1179/2244 nt) | yfgF | predicted inner membrane protein |
| ? | Exported | = 1660457 | 54 (1.040) | coding (1168/2244 nt) | yfgF | predicted inner membrane protein | |||||
Only 100 of 116 total aligned reads displayed.
GCTCCTGGTGCGATTCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTATTGAATCCGCAGCATGATGCCATAG > Exported/1660376‑1660515 | gcTCCTGGTGCGATTCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCC > 1:548027‑M1/1‑71 (MQ=255) cTGGTGCGATTCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGt < 1:2198230/70‑1 (MQ=255) ggTGCGATTCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCg < 1:275712/66‑1 (MQ=255) cGATTCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCa < 1:929948/71‑1 (MQ=255) gATTCTGTATTCAGTCGCAGCGCGAGATCTTTACCCGAAAGCTGATAATCATCTTCACCCGGTTCCAGCaa < 1:863649/71‑1 (MQ=255) gATTCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCaa < 1:2389955/71‑1 (MQ=255) gATTCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCaa < 1:3066579/71‑1 (MQ=255) tCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAg > 1:209411‑M2/1‑68 (MQ=255) tCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAg > 1:1096036‑M2/1‑68 (MQ=255) cTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAgggt < 1:407794‑M2/71‑5 (MQ=255) tATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAgggtga < 1:1924182‑M2/70‑7 (MQ=255) tATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAgggtga < 1:1381293‑M2/70‑7 (MQ=255) tATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAgggtg > 1:1234003‑M2/1‑64 (MQ=255) tATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAgggt > 1:376301‑M2/1‑64 (MQ=255) tATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAgggt > 1:21261‑M2/1‑64 (MQ=255) tATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGAc < 1:2641894/71‑1 (MQ=255) aTTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAgggtga < 1:3289263‑M2/69‑7 (MQ=255) ttCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCttgctggaaccgggtgaag < 1:270664‑M1/70‑20 (MQ=255) ttCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCttgctggaaccgggtgaag < 1:1192975‑M1/70‑20 (MQ=255) ttCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCaa > 1:599419/1‑62 (MQ=255) tCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAgggtg > 1:2856746‑M2/1‑61 (MQ=255) cAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCttgctggaaccgggtgaagat < 1:1635793‑M1/70‑22 (MQ=255) cAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGc < 1:1601114/70‑1 (MQ=255) cAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGc > 1:1302535/1‑70 (MQ=255) aGTCGAAGCGAGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGAc > 1:3434071/1‑66 (MQ=255) gTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAg > 1:3248676/1‑71 (MQ=255) gTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAg > 1:1848323/1‑71 (MQ=255) tCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGt > 1:3059388/1‑71 (MQ=255) tCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCC < 1:3107381‑M1/46‑1 (MQ=255) tCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCC < 1:1059704‑M1/46‑1 (MQ=255) cGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCa < 1:1908989/68‑1 (MQ=255) cGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGt > 1:3692870/1‑70 (MQ=255) gCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAg < 1:3226296/52‑1 (MQ=255) gCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAg < 1:977241/52‑1 (MQ=255) gCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTga < 1:1983923/71‑1 (MQ=255) gCAGCGCGAGATCGTTACCCGAAAGATGATAAACATCTTCACCCTGTTCCAGCAAGGGTGACAGCCAGt > 1:2803934/1‑69 (MQ=255) gcgcGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTgaga > 1:1058502/1‑70 (MQ=255) gcgcGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTgaga > 1:112126/1‑70 (MQ=255) gcgcGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTgaga > 1:48832/1‑70 (MQ=255) gcgcGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTgaga > 1:3376145/1‑70 (MQ=255) cgcgAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCa > 1:3137002/1‑47 (MQ=255) gagaTCGTTACCCGAAAGCTGATAAACATCTTCACCCGGtt > 1:1010594/1‑41 (MQ=255) agaTCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGttt < 1:1842582/71‑1 (MQ=255) agaTCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGttt < 1:2255883/71‑1 (MQ=255) agaTCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGttt < 1:2349039/71‑1 (MQ=255) gaTCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGtttt < 1:3100725/71‑1 (MQ=255) aTCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGttttt < 1:925309/71‑1 (MQ=255) tCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGttttt < 1:3303608/70‑1 (MQ=255) gTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGc < 1:2596795/70‑1 (MQ=255) ttACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGc < 1:3380122/39‑1 (MQ=255) tACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTg > 1:3538423/1‑71 (MQ=255) aCCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCaa > 1:877368/1‑39 (MQ=255) aCCAGAAAGCTGATAAACATCTTCACCCGGTTCCAGCaa > 1:863116/1‑39 (MQ=255) cccGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTa > 1:1451652/1‑71 (MQ=255) cccGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTa > 1:3055188/1‑71 (MQ=255) cccGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTa > 1:1150628/1‑71 (MQ=255) cccGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTa < 1:2658775/71‑1 (MQ=255) ccGAAAGCTGATAAACATCTTCACCCttgctggaaccgggt < 1:1541135‑M1/41‑16 (MQ=255) cGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTAtt < 1:2721989/71‑1 (MQ=255) cGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTAtt > 1:2255259/1‑71 (MQ=255) cGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTAtt < 1:2614416/71‑1 (MQ=255) gAAAGCTGATAAACATCTTCACCCttgctggaaccgggtg > 1:3176271‑M1/1‑24 (MQ=255) gAAAGCTGATAAACATCTTCACCCttgctggaaccgggt > 1:3300961‑M1/1‑24 (MQ=255) gAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTAtt < 1:2845849/70‑1 (MQ=255) gAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTAtt > 1:3383517/1‑70 (MQ=255) gAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTATTg < 1:2584387/71‑1 (MQ=255) aaGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTATTGaa > 1:323848/1‑71 (MQ=255) aGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTATTGAAt < 1:3200101/71‑1 (MQ=255) aTAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTATTGAATCCg > 1:3121700/1‑69 (MQ=255) tAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTATTGAATCCgcag > 1:2421090/1‑71 (MQ=255) aaCATCTTCACCCGGTTCCAGCAAGGGTGACAGCCa < 1:1782197/36‑1 (MQ=255) aCATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTATTGAATCCGCAGCat > 1:2838394/1‑71 (MQ=255) aTCTTCACCCGGTTCCAGCAAgggtgaagatgtttatcagctttcgggtaacgatctcgcgctgcgactg < 1:1635793‑M2/70‑50 (MQ=255) aTCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTATTGAATCCGCAGCatga > 1:47576/1‑71 (MQ=255) cTTCACCCGGTTCCAGCAAgggtgaagatgtttatcagctttcgggtaacgatctcgcgctgcgactgaa < 1:270664‑M2/70‑52 (MQ=255) cTTCACCCGGTTCCAGCAAgggtgaagatgtttatcagctttcgggtaacgatctcgcgctgcgactgaa < 1:1192975‑M2/70‑52 (MQ=255) cTTCACCCGGTTCCAGCAAgggtgaagatgtttatcagctttcgggtaacgatctcgcgctgcgactgaa < 1:1352040‑M2/70‑52 (MQ=255) ctCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTATTGAATCCGCAGCATGATGc < 1:1500840/70‑1 (MQ=255) tCACCCttgctggaaccgggtgaagatgtttatcagctttcgggtaacgatctcgcgctgcgactgaata < 1:1924182‑M1/70‑65 (MQ=255) tCACCCttgctggaaccgggtgaagatgtttatcagctttcgggtaacgatctcgcgctgcgactgaata < 1:1381293‑M1/70‑65 (MQ=255) tCACCCttgctggaaccgggtgaagatgtttatcagctttcgggtaacgatctcgcgctgcgactgaat < 1:3289263‑M1/69‑64 (MQ=255) tCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGtttt < 1:1057226/42‑1 (MQ=255) tCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGtttt < 1:238707/42‑1 (MQ=255) cACCCttgctggaaccgggtgaagatgtttatcagctttcgggtaacgatctcgcgctgcgactgaata > 1:1234003‑M1/1‑5 (MQ=255) cACCCttgctggaaccgggtgaagatgtttatcagctttcgggtaacgatctcgcgctgcgactga > 1:2856746‑M1/1‑5 (MQ=255) cACCCGGTTCCAGCAAgggtgaagatgtttatcagctttc > 1:3100278‑M2/1‑16 (MQ=255) cACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTATTGAATCCGCAGCatgat < 1:2170955/67‑1 (MQ=255) cACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTATTGAATCCGCAGCATGATGc < 1:531849/69‑1 (MQ=255) cACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTATTGAATCCGCAGCATGATGc < 1:2648745/69‑1 (MQ=255) aCCCttgctggaaccgggtgaagatgtttatcagctttcgggtaacgatctcgcgctgcgactgaatacag < 1:407794‑M1/71‑68 (MQ=255) aCCCttgctggaaccgggtgaagatgtttatcagctttcgggtaacgatctcgcgctgcgactgaata > 1:376301‑M1/1‑4 (MQ=255) aCCCttgctggaaccgggtgaagatgtttatcagctttcgggtaacgatctcgcgctgcgactgaata > 1:21261‑M1/1‑4 (MQ=255) aCCCGGTTCCAGCAAgggtgaagatgtttatcagctttcgg < 1:1541135‑M2/41‑27 (MQ=255) aCCCGGTTCCAGCAAgggtgaagatgtttatcagctttc > 1:3300961‑M2/1‑15 (MQ=255) aCCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTATTGAATCCGCAGCATGATGCCa > 1:3079079/1‑70 (MQ=255) cccGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTATTGAATCCGCAGCATGATGCCa > 1:1525634/1‑69 (MQ=255) ccGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTATTGAATCCGCAGCATGATGCCATAg > 1:651433/1‑71 (MQ=255) ccGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTATTGAATCCGCAGCATGATGCCATAg > 1:1464042/1‑71 (MQ=255) cttgctggaaccgggtgaagatgtttatcagctttcgggtaacgatctcgcgctgcgactgaatacaga > 1:1096036‑M1/1‑1 (MQ=255) cttgctggaaccgggtgaagatgtttatcagctttcgggtaacgatctcgcgctgcgactgaatacaga > 1:209411‑M1/1‑1 (MQ=255) | GCTCCTGGTGCGATTCTGTATTCAGTCGCAGCGCGAGATCGTTACCCGAAAGCTGATAAACATCTTCACCCGGTTCCAGCAAGGGTGACAGCCAGTGAGAAAGTTTTTGCTTGTATTGAATCCGCAGCATGATGCCATAG > Exported/1660376‑1660515 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |