New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Exported	1736409 =	35 (0.590)	3 (0.050)	3/96	NT	8.6%	coding (341/681 nt)	rnc	RNase III
	?	Exported	1736433 =	31 (0.560)					coding (317/681 nt)	rnc	RNase III

AGGATTAATTTCTCGACGGTTTGAATATCACTGTCGAGGAATACGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACCGCTTTTAAGTTCACCTGGCCCTAAACGTAAG  >  Exported/1736340‑1736471                                                                      |                                                               aGGATTAATTTCTCGACGGTTTGAATATCACTGTCGAGGAATACGCCACCAATTAATGCTTCGACGGTGTc                                                               <  1:2770331/71‑1 (MQ=255)      tAATTTCTCGACGGTTTGAATATCACTGTCGAGGAATACGCCACCAATTAATGCTTCGACGGTGTCGGc                                                            >  1:1910205/1‑69 (MQ=255)      tAATTTCTCGACGGTTTGAATATCACTGTCGAGGAATACGCCACCAATTAATGCTTCGACGGTGTCGGc                                                            >  1:1973222/1‑69 (MQ=255)         tttCTCGACGGTTTGAATATCACTGTCGAGGAATACGCCACCAATTAATGCTTCGACGGTGTCGGCGAGaa                                                       >  1:1664456/1‑71 (MQ=255)            ctcGACGGTTTGAATATCACTGTCGAGGAATACGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAAtt                                                     <  1:1284327/70‑1 (MQ=255)            ctcGACGGTTTGAATATCACTGTCGAGGAATACGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAAtt                                                     <  1:1286435/70‑1 (MQ=255)                      tGAATATCACTGTCGAGGAATACGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCacgac                                           <  1:831171/70‑1 (MQ=255)                      tGAATATCACTGTCGAGGAATACGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCacgac                                           <  1:243197/70‑1 (MQ=255)                      tGAATATCACTGTCGAGGAATACGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCacgac                                           <  1:2856322/70‑1 (MQ=255)                       ggcgagtgcttacgtttagggccaggtgaacttaaaagcggtggattTCGGCGAGAATTGACTCAcgacga                                         >  1:1608419‑M1/48‑71 (MQ=255)                       gAATATCACTGTCGAGGAATACGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCacgacg                                          >  1:1552157/1‑70 (MQ=255)                           atCACTGTCGAGGAATACGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATc                                     >  1:808584/1‑71 (MQ=255)                            tCACTGTCGAGGAATACGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATcc                                    <  1:1810062/71‑1 (MQ=255)                               cTGTCGAGGAATACGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCAcc                                 >  1:3485548/1‑71 (MQ=255)                                  tCGAGGAATACGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACCGCt                              <  1:3026344/71‑1 (MQ=255)                                   cgtttagggccaggtgaacttaaaagcggtggattTCGGCGAGAATTGACt                                                 >  1:1031931‑M1/36‑51 (MQ=255)                                    gAGGAATACGCCACCAATTAATGCTTCGACGGTGTCGGCgag                                                         <  1:3686574/42‑1 (MQ=255)                                     tttagggccaggtgaacttaaaagcggtggattTCGGCGAGAATTGACTCa                                               <  1:339068‑M1/18‑1 (MQ=255)                                     aGGAATACGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACCGCttt                            >  1:2670287/1‑70 (MQ=255)                                         aTACGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACCGCTTTTAAGt                       >  1:580872/1‑71 (MQ=255)                                          tACGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCa                                               >  1:1055085/1‑46 (MQ=255)                                          tACGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCAc                                  >  1:2559445/1‑59 (MQ=255)                                          tACGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCAc                                  >  1:3673265/1‑59 (MQ=255)                                           aCGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGa                                                   >  1:138782/1‑41 (MQ=255)                                           aCGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGa                                                   >  1:2083998/1‑41 (MQ=255)                                            cGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACCGCTTTTAAGTTCa                    <  1:2705487/71‑1 (MQ=255)                                             gCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACAGCTTTTAAGTTCAc                   <  1:284383/71‑1 (MQ=255)                                               caccaATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACCGCTTTTAAGTTCACCt                 <  1:655334/71‑1 (MQ=255)                                               caccaATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACCGCTTTTAAGTTCACCt                 >  1:3365374/1‑71 (MQ=255)                                                accaATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACCGCTTTTAAGTTCACCTg                <  1:2194738/71‑1 (MQ=255)                                                  caATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACCGCTTTTAAGTTCACCTgg               <  1:3636044/70‑1 (MQ=255)                                                  caATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACCGCTTTTAAGTTCACCTGGc              >  1:1317243/1‑71 (MQ=255)                                                  caATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACCGCTTTTAAGTTCACCTGGc              >  1:1823244/1‑71 (MQ=255)                                                    aTTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACCGCTTTTAAGTTCACCTGGccc            >  1:263460/1‑71 (MQ=255)                                                       aaTGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATcc                                    >  1:1471977/1‑44 (MQ=255)                                                           cTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACCGCTTTTAAGTTCACCTGGcc             >  1:689695/1‑63 (MQ=255)                                                           cTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACCGCTTTTAAGTTCACCTGGCCCTAAACGt     <  1:3167909/71‑1 (MQ=255)                                                           cTTCGACGGTGTCGGCGAGAATTGACTCAAGACGAAATCCACCGCTTTTAAGTTCACCTGGcc             >  1:2954186/1‑63 (MQ=255)                                                              cGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACCGCTTTTAAGt                       >  1:2200197/1‑50 (MQ=255)                                                              cGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACCGCTTTTAAGTTCACCTGGCCCTAAACGTa    <  1:630039/69‑1 (MQ=255)                                                              cGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACCGCTTTTAAGTTCACCTGGCCCTAAACGTAAg  >  1:833385/1‑71 (MQ=255)                                                                      TCGGCGAGAATTGACTCACGACGAAATCCACCGCTTTTAAGt                       >  1:1894138‑M1/1‑42 (MQ=255)                                                                      |                                                               AGGATTAATTTCTCGACGGTTTGAATATCACTGTCGAGGAATACGCCACCAATTAATGCTTCGACGGTGTCGGCGAGAATTGACTCACGACGAAATCCACCGCTTTTAAGTTCACCTGGCCCTAAACGTAAG  >  Exported/1736340‑1736471

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.