| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 2266492 | 44 (0.750) | 8 (0.150) | 3/92 | NT | 14.0% | intergenic (‑49/+66) | tufB/thrT | protein chain elongation factor EF‑Tu/tRNA‑Thr |
| ? | Exported | = 2266511 | 59 (1.110) | intergenic (‑68/+47) | tufB/thrT | protein chain elongation factor EF‑Tu/tRNA‑Thr | |||||
Only 100 of 120 total aligned reads displayed.
TCAAACTTTTCTTTAGACATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTG > Exported/2266424‑2266562 | tCAAACTTTTCTTTAGACATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAAC > 1:3458288‑M1/1‑69 (MQ=255) cAAACTTTTCTTTAGACATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCa > 1:3146855/1‑70 (MQ=255) cAAACTTTTCTTTAGACATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAg > 1:2064760/1‑71 (MQ=255) cAAACTTTTCTTTAGACATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAg > 1:2116124/1‑71 (MQ=255) aaaCTTTTCTTTAGACATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAgg > 1:3601987/1‑71 (MQ=255) cTTTTCTTTAGACATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCaa < 1:421987/71‑1 (MQ=255) tttCTTTAGACATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAgg > 1:3451578/1‑66 (MQ=255) tttCTTTAGACATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAgg > 1:2699684/1‑66 (MQ=255) ttatttagaCATCGATTGTCCCTATAAGAAACGGATAAATCGTTGATATAACCACATCAAC > 1:960002‑M1/4‑61 (MQ=255) ttCTTTAGACATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACAt > 1:1713980/1‑71 (MQ=255) ttCTTTAGACATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACAt > 1:1808255/1‑71 (MQ=255) cTTTAGACATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATg < 1:1902653/70‑1 (MQ=255) tAGACATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGc > 1:1284773/1‑61 (MQ=255) aGACATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGa > 1:1858548/1‑71 (MQ=255) cATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACtt < 1:760258/71‑1 (MQ=255) aTCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACaagtcgggcatgttgcctgg > 1:1749899‑M1/1‑51 (MQ=255) aTCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACaagtcgggcatgttgcctgg > 1:1278878‑M1/1‑51 (MQ=255) aTCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACtt < 1:271212/70‑1 (MQ=255) aTCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTg > 1:1073021‑M2/1‑70 (MQ=255) cGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgtt < 1:2624860‑M2/71‑4 (MQ=255) cGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgtt < 1:178808‑M2/71‑4 (MQ=255) gATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgttg > 1:2245179‑M2/1‑67 (MQ=255) aTTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGccc > 1:2813507/1‑61 (MQ=255) aTTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGccc > 1:1236232/1‑61 (MQ=255) aTTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgttga > 1:1274284‑M2/1‑66 (MQ=255) aTTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgttga > 1:1879598‑M2/1‑66 (MQ=255) ttGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGaa < 1:3610507/71‑1 (MQ=255) tCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACaagtcgggcatgttgcctggttgatgt < 1:1481633‑M1/70‑28 (MQ=255) tCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACaagtcgggcatgttgcctggttgatgt < 1:3214995‑M1/70‑28 (MQ=255) tCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCa < 1:1057266/45‑1 (MQ=255) cccTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGc > 1:940040/1‑70 (MQ=255) ccTCTAAGACACTGATAAATCGGTGATATCACCACATCAACaagtcgggcatgttgcctggttgatgtgg < 1:3681289‑M1/70‑30 (MQ=255) ccTCTAAGACACGGATAAATCGGTGATATCACCACATCAACaagtcgggcatgttgcctggttgatgtgg < 1:963764‑M1/70‑30 (MQ=255) ccTCTAAGACACGGATAAATCGGTGATATCACCACATCAACaagtcgggcatgttgcctggttgatgtgg < 1:1574051‑M1/70‑30 (MQ=255) tctAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgtt > 1:828433‑M2/1‑58 (MQ=255) tctAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgtt > 1:549654‑M2/1‑58 (MQ=255) tctAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgtt > 1:3501909‑M2/1‑58 (MQ=255) tAAGACACGGATAAATCGGTGATATCACCACATCAACCTGGCAACATGCCCGACTTGTTGAATGCAATaaa > 1:1386954/1‑71 (MQ=255) aaGACACGGATAAATCGGTGATATCACCACATCAACCa > 1:866623/1‑38 (MQ=255) aaGACACGGATAAATCGGTGATATCACCACATCAACCa > 1:1086958/1‑38 (MQ=255) aaGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATaaa > 1:3437244/1‑70 (MQ=255) gACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAg < 1:549283/71‑1 (MQ=255) gACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAg < 1:116202/71‑1 (MQ=255) acacGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgttg > 1:3014148‑M2/1‑52 (MQ=255) acacGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgttg > 1:2656496‑M2/1‑52 (MQ=255) acacGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACa < 1:2274756/69‑1 (MQ=255) gATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAg < 1:1680512/65‑1 (MQ=255) gATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAg < 1:1727430/65‑1 (MQ=255) aTAAATCGGTGATATCACCACATCAACCAGGCAACa > 1:938758/1‑36 (MQ=255) aTAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGaa > 1:3614334/1‑70 (MQ=255) tAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGaaaa < 1:2040060/71‑1 (MQ=255) aaaTCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGcaacaa < 1:1598684/58‑1 (MQ=255) aaaTCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATaa < 1:2343355/58‑1 (MQ=255) aaaTCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATaa < 1:1195267/58‑1 (MQ=255) aaaTCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATaa < 1:1288445/58‑1 (MQ=255) aTCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAATGaaaaaa < 1:2973943/70‑1 (MQ=255) ggTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAgg > 1:3047377/1‑71 (MQ=255) tatCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGTAATAAACAGAAGGAAAAAACAGggag > 1:217643/1‑69 (MQ=255) tatCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGTAATAAACAGAAGGAAAAAACAGggag > 1:2763077/1‑69 (MQ=255) atCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGggag > 1:3318177/1‑68 (MQ=255) tCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGgaggag < 1:1907481/70‑1 (MQ=255) tCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGgaga < 1:3360100/71‑1 (MQ=255) ccacATCAACCAGGCAACATGCCCGACTTgttgatgtggtgatatcaccgatttatccgtgtcttagagg < 1:963764‑M2/70‑42 (MQ=255) ccacATCAACCAGGCAACATGCCCGACTTgttgatgtggtgatatcaccgatttatccgtgtcttagagg < 1:1574051‑M2/70‑42 (MQ=255) ccacATCAACCAGGCAACATGCCCGACTTgttgatgtggtgatatcaccgatttatcagtgtcttagagg < 1:3681289‑M2/70‑42 (MQ=255) ccacATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGaa > 1:3190651/1‑69 (MQ=255) cacaTCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGaa > 1:1516322/1‑68 (MQ=255) acaTCAACCAGGCAACATGCCCGACTTgttgatgtggtgatatcaccgatttatccgtgtcttagaggga < 1:3214995‑M2/70‑44 (MQ=255) acaTCAACCAGGCAACATGCCCGACTTgttgatgtggtgatatcaccgatttatccgtgtcttagaggga < 1:1481633‑M2/70‑44 (MQ=255) caTCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACa < 1:1968206/56‑1 (MQ=255) caTCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACa < 1:389255/56‑1 (MQ=255) caTCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACa < 1:1213609/56‑1 (MQ=255) tCAACCAGGCATCATGCCCGACTTGTTGAATGCAATAAACAGaa < 1:3078603/44‑1 (MQ=255) tCAACCAGGCAACATGCCCGACTTGTTGAATGCAATaaa < 1:1761571/39‑1 (MQ=255) tCAACCAGGCAACATGCCCGACTTGTTGAATGCAATaaa < 1:1003611/39‑1 (MQ=255) tCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGaa < 1:785157/44‑1 (MQ=255) tCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGaa < 1:559918/44‑1 (MQ=255) tCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGaa < 1:1603657/44‑1 (MQ=255) tCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGaa < 1:1672724/44‑1 (MQ=255) tCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGaa < 1:3010247/44‑1 (MQ=255) caacaagtcgggcatgttgcctggttgatgtggtgatatcaccgatttatccgtgtcttagagggacaatc > 1:2245179‑M1/1‑4 (MQ=255) caacaagtcgggcatgttgcctggttgatgtggtgatatcaccgatttatccgtgt > 1:2656496‑M1/1‑4 (MQ=255) caacaagtcgggcatgttgcctggttgatgtggtgatatcaccgatttatccgtgt > 1:3014148‑M1/1‑4 (MQ=255) cAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGaaaa > 1:2013153/1‑65 (MQ=255) cAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAgtg > 1:1403774/1‑71 (MQ=255) cAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAgtg > 1:2024745/1‑71 (MQ=255) aacaagtcgggcatgttgcctggttgatgtggtgatatcaccgatttatccgtgtcttagagggacaatcg < 1:524050‑M1/71‑69 (MQ=255) aacaagtcgggcatgttgcctggttgatgtggtgatatcaccgatttatccgtgtcttagagggacaatcg < 1:178808‑M1/71‑69 (MQ=255) aacaagtcgggcatgttgcctggttgatgtggtgatatcaccgatttatccgtgtcttaga > 1:828433‑M1/1‑3 (MQ=255) aacaagtcgggcatgttgcctggttgatgtggtgatatcaccgatttatccgtgtcttaga > 1:549654‑M1/1‑3 (MQ=255) aacaagtcgggcatgttgcctggttgatgtggtgatatcaccgatttatccgtgtcttaga > 1:3501909‑M1/1‑3 (MQ=255) aaCCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGaa > 1:3073641/1‑42 (MQ=255) aaCCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAgtgg > 1:654056/1‑71 (MQ=255) aaCCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAgtgg > 1:2114019/1‑71 (MQ=255) aaCCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAgtgg > 1:3293043/1‑71 (MQ=255) ccAGGCAACATGCCCGACTTgttgatgtggtgatatcaccgatttatccgtgtcttagagggacaatcgat > 1:1278878‑M2/1‑20 (MQ=255) ccAGGCAACATGCCCGACTTgttgatgtggtgatatcaccgatttatccgtgtcttagagggacaatcgat > 1:1565293‑M2/1‑20 (MQ=255) ccAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAggg > 1:1213183/1‑53 (MQ=255) ccAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACATGGAGGAGAAAAGAAgtggtg > 1:2850218/1‑71 (MQ=255) caagtcgggcatgttgcctggttgatgtggtgatatcaccgatttatccgtgtcttagagggacaatcgat > 1:1073021‑M1/1‑1 (MQ=255) | TCAAACTTTTCTTTAGACATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTG > Exported/2266424‑2266562 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |