| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 2281412 = | 33 (0.560) | 9 (0.170) | 4/94 | NT | 21.6% | intergenic (‑92/‑185) | fabR/sthA | DNA‑binding transcriptional repressor/pyridine nucleotide transhydrogenase, soluble |
| ? | Exported | 2281464 = | 35 (0.640) | intergenic (‑144/‑133) | fabR/sthA | DNA‑binding transcriptional repressor/pyridine nucleotide transhydrogenase, soluble | |||||
ATGAACGGTAACGCAATAAAACATATTTACTGCAATTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGA > Exported/2281344‑2281481 | atgaaCGGTAACGCAATAAAACATATTTACTGCAATTCTTTGGCCGGTTCTTTTACGTACAGCGGAAAcc < 1:2866330/70‑1 (MQ=255) tgaaCGGTAACGCAATAAAACATATTTACTGCAATTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTg < 1:59032/71‑1 (MQ=255) tgatccccgtcatttatctggctatatcctgagcggcctttgctttgtctgtttcttacttttgcCCtgt > 1:2244626‑M1/66‑69 (MQ=255) aCGGTAACGCAATAAAACATATTTACTGCAATTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCg < 1:1599055/71‑1 (MQ=255) cGGTAACGCAATAAAACATATTTACTGCAATTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGc < 1:142669/71‑1 (MQ=255) tAACGCAATAAAACATATTTACTGCAATTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTa < 1:3539708/71‑1 (MQ=255) tAACGCAATAAAACATATTTACTGCAATTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTa < 1:3355829/71‑1 (MQ=255) aCGCAATAAAACATATTTACTGCAATTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTaa < 1:2220974/70‑1 (MQ=255) gCAATAAAACATATTTACTGCAATTCTTTGGCCGGTTCTTTTACGTAAAGCGGAAACCTGCCGCTTAAACg < 1:266465/71‑1 (MQ=255) aCATATTTACTGCAATTCTTTTGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTAt > 1:1019098/1‑71 (MQ=255) aCATATTTACTGCAATTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTaa < 1:972197/60‑1 (MQ=255) aCATATTTACTGCAATTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTaa < 1:1753367/60‑1 (MQ=255) tatTTACTGCAATTCTTTGGCCGGTTCTTTTACGTACAGCGGAACCCTGc > 1:3664162/1‑50 (MQ=255) atTTACTGCAATTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGagag > 1:3636061/1‑64 (MQ=255) atTTACTGCAATTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGagag > 1:2538055/1‑64 (MQ=255) tttACTGCAATTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTAtcgtc < 1:1942850/70‑1 (MQ=255) tttACTGCAATTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTAtcgtc > 1:3395945/1‑70 (MQ=255) tttACTGCAATTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTAtcgtc < 1:2563861/70‑1 (MQ=255) cTGCAATTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTATCGTCGATaa < 1:670219/71‑1 (MQ=255) aaTTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAAt > 1:2849043/1‑71 (MQ=255) aTTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTAAACGga > 1:3491428/1‑51 (MQ=255) aTTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATc > 1:1710547/1‑71 (MQ=255) aTTCTTTGGCCGGTTCTGTTACGTACAGCGGAAACCTGCCGCTTAAACGga > 1:1751611/1‑51 (MQ=255) aTTCTTTGGCCGGTTCTCTTACGTACAGCGGAAACCTGCCGCTTAAACGga > 1:1755924/1‑51 (MQ=255) ttCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTAtcg < 1:1631692/58‑1 (MQ=255) gcggcctttgctttgtctgtttcttacttttgcCCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATc < 1:2685292‑M1/37‑1 (MQ=255) gcggcctttgctttgtctgtttcttacttttgcCCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATc < 1:2340282‑M1/37‑1 (MQ=255) tttGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAAt < 1:3661030/66‑1 (MQ=255) tttGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAAt < 1:1250553/66‑1 (MQ=255) gcctttgatttgtctgtttcttacttttgcCCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCaa < 1:2712713‑M1/40‑1 (MQ=255) gCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATaaa < 1:715895/70‑1 (MQ=255) gCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATaaa < 1:3510086/70‑1 (MQ=255) ctttgtctgtttcttacttttgcCCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACg > 1:2550332‑M1/24‑70 (MQ=255) ctttgtctgtttcttacttttgcCCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACg > 1:42459‑M1/24‑70 (MQ=255) ctttgtctgtttcttacttttgcCCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACg > 1:2249588‑M1/24‑70 (MQ=255) gTTCTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTc < 1:2897378/71‑1 (MQ=255) cTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGagag > 1:2664217/1‑39 (MQ=255) cTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGagag > 1:1094513/1‑39 (MQ=255) cTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGagag > 1:2529684/1‑39 (MQ=255) ttACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGc < 1:2062697/70‑1 (MQ=255) tttcttacttttgcCCTGCCGCTTAAACGGAGAGt > 1:3636353‑M1/15‑35 (MQ=255) tttcttacttttgcCCTGCCGCTTAAACGGAGAGt > 1:269323‑M1/15‑35 (MQ=255) tttcttacttttgcCCTGCCGCTTAAACGGAGAGt > 1:18499‑M1/15‑35 (MQ=255) aGCGGAAACCTGCCGCTTAAACGGAGAGTATCGTCGATaa < 1:2187675/40‑1 (MQ=255) cGGAAACCTGCCGCTTAAACGGAGAGTATCGTCGATaaaa > 1:147875/1‑40 (MQ=255) cGGAAACCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGa > 1:637944/1‑70 (MQ=255) ggAAACCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAgg > 1:458676/1‑57 (MQ=255) aaaCCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGt < 1:2219094/51‑1 (MQ=255) aaaCCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACa < 1:2934843/71‑1 (MQ=255) aaCCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGaaa > 1:688826/1‑68 (MQ=255) aaCCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGaaa > 1:1684063/1‑68 (MQ=255) aCCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGa < 1:3129867/71‑1 (MQ=255) CCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGa < 1:1015438‑M1/70‑1 (MQ=255) | ATGAACGGTAACGCAATAAAACATATTTACTGCAATTCTTTGGCCGGTTCTTTTACGTACAGCGGAAACCTGCCGCTTAAACGGAGAGTATCGTCGATAAAAATCCAATAAAACGTCAGGGCAAAAGTAAGAAACAGA > Exported/2281344‑2281481 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |