| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 2814840 = | 43 (0.730) | 4 (0.080) | 3/92 | NT | 10.3% | coding (496/1587 nt) | yjcC | predicted signal transduction protein |
| ? | Exported | 2814859 = | 31 (0.580) | coding (515/1587 nt) | yjcC | predicted signal transduction protein | |||||
TATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCA > Exported/2814771‑2814909 | ttgctgccgaggcctctttgcttaacgagaaaaaggttttcgtcaccgtatcatacacaccccattgcaa < 1:3282286‑M1/1‑1 (MQ=255)ttgctgccgaggcctctttgcttaacgagaaaaaggttttcgtcaccgtatcatacacaccccattgcaAt > 1:255201‑M1/70‑71 (MQ=255) taAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGagtgaagtga < 1:3476588/68‑1 (MQ=255) taAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGagtgaagtga < 1:3455840/68‑1 (MQ=255) taAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGagtgaagtga < 1:2509422/68‑1 (MQ=255) gctgccgaggcctctttgcttaacgagaaaaaggttttcgtcaccgtatcatacacaccccattgcaATg > 1:231197‑M1/68‑70 (MQ=255) aaaTGACCTATATGCAGCGGGGAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCt > 1:1603753/1‑71 (MQ=255) aaaTGACCTATATGCAGCGGGGAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCt < 1:3197395/71‑1 (MQ=255) aaTGACCTATATGCAGCGGGGAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCt < 1:1210816/70‑1 (MQ=255) aTGACCTATATGCAGCGGGGAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCtga > 1:1969086/1‑71 (MQ=255) aTGACCTATATGCAGCGGGGAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCtga < 1:1919742/71‑1 (MQ=255) aCCTATATGCAGCGGGGAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCtgatga < 1:205066/71‑1 (MQ=255) ccTATATGCAGCGGGGAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGAc < 1:3072153/71‑1 (MQ=255) ccTATATGCAGCGGGGAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGAc < 1:927973/71‑1 (MQ=255) atGCAGCGGGGAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGa > 1:812761/1‑70 (MQ=255) aGCGGGGAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTc < 1:1577515/55‑1 (MQ=255) aGCGGGGAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGACATTg < 1:3051508/71‑1 (MQ=255) aacgagaaaaaggttttcgtcaccgtatcatacacaccccattgcaATGTc > 1:2854091‑M1/47‑51 (MQ=255) ggAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGACa < 1:2121399/63‑1 (MQ=255) ggAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATg > 1:1275296/1‑71 (MQ=255) ggAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATg > 1:1109090/1‑71 (MQ=255) gagaaaaaggttttcgtcaccgtatcatacacaccccattgcaATGTCTGATGACCCGACa > 1:1704364‑M1/44‑61 (MQ=255) gagaaaaaggttttcgtcaccgtatcatacacaccccattgcaATGTCTGATGACCCGACa > 1:2330321‑M1/44‑61 (MQ=255) aaTTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGACAt < 1:1513301/61‑1 (MQ=255) gaaaaaggttttcgtcaccgtatcatacacaccccattgcaATGTCTGATGACCCGACAtt < 1:1260045‑M1/20‑1 (MQ=255) ttATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGgtg < 1:504326/71‑1 (MQ=255) ttATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGgtg < 1:3035408/71‑1 (MQ=255) tATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGgtg < 1:3024010/70‑1 (MQ=255) aaaggttttcgtcaccgtatcatacacaccccattgcaATGTCTGATGACCCGACAt > 1:3307190‑M1/39‑57 (MQ=255) tgtgGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGgtgtg > 1:143925/1‑70 (MQ=255) tgGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGAc > 1:692779/1‑47 (MQ=255) gCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTATGa < 1:794732/71‑1 (MQ=255) ttcgtcaccgtatcatacacaccccattgcaATGt < 1:2180631‑M1/4‑1 (MQ=255) ttcgtcaccgtatcatacacaccccattgcaATGt < 1:3257616‑M1/4‑1 (MQ=255) ttcgtcaccgtatcatacacaccccattgcaATGt < 1:2865481‑M1/4‑1 (MQ=255) ttcgtcaccgtatcatacacaccccattgcaATGt < 1:3017374‑M1/4‑1 (MQ=255) ttcgtcaccgtatcatacacaccccattgcaATGTc < 1:2573580‑M1/5‑1 (MQ=255) ttcgtcaccgtatcatacacaccccattgcaATGTc < 1:2880333‑M1/5‑1 (MQ=255) ggTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCtgat < 1:22458/40‑1 (MQ=255) ggTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCtgat < 1:2445583/40‑1 (MQ=255) ggTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCtgat < 1:2213308/40‑1 (MQ=255) gTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGa < 1:2235359/46‑1 (MQ=255) gTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGa < 1:2240683/46‑1 (MQ=255) aTCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGt > 1:2805653/1‑71 (MQ=255) tCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGt < 1:1902893/70‑1 (MQ=255) aCCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGTGAc > 1:3729553/1‑70 (MQ=255) ccTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGTGACGa > 1:1731964/1‑70 (MQ=255) tcttctGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGt < 1:1015894/61‑1 (MQ=255) tctGGAGTGAAGTGATGTCCGATGACCCGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCttt > 1:996055/1‑71 (MQ=255) ctGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCt < 1:2710047/68‑1 (MQ=255) tGGAGTTAAGTGATGTCTGATGACCCGACATTGCAATGGTGTGTGTAt < 1:2808055/48‑1 (MQ=255) tGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTAt < 1:30513/48‑1 (MQ=255) tGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTAt < 1:3469654/48‑1 (MQ=255) tGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTAt < 1:562940/48‑1 (MQ=255) tGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCttttt > 1:1646380/1‑71 (MQ=255) ggAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCttt > 1:3309508/1‑68 (MQ=255) ggAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCttt > 1:927565/1‑68 (MQ=255) gAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTtct < 1:1043385/71‑1 (MQ=255) agtgaagtgaTGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTtctc > 1:116584/1‑71 (MQ=255) gtgaagtgaTGTCTGATGACCCGACATTGCAATgg < 1:1449982/35‑1 (MQ=255) gtgaagtgaTGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCg > 1:3566556/1‑71 (MQ=255) gtgaTGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTTAAg > 1:3590075/1‑71 (MQ=255) ATGTCTGATGACCCGACATTGCAATGTGGTGTGTa > 1:1662230‑M1/1‑35 (MQ=255) ATGTCTGATGACCCGACATTGCAATGGGGTGTGTa > 1:1786486‑M1/1‑35 (MQ=255) ATGTCTGATGACCCGACATTGCAATGGGGTGTGTa > 1:556251‑M1/1‑35 (MQ=255) ATGTCTGATGACCCGACATTGCAATGGGGTGTGTa > 1:3216317‑M1/1‑35 (MQ=255) ATGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCa > 1:232844‑M1/1‑70 (MQ=255) | TATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCA > Exported/2814771‑2814909 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |