| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 285049 | 44 (0.750) | 8 (0.150) | 3/92 | NT | 16.9% | intergenic (+149/‑97) | tig/clpP | peptidyl‑prolyl cis/trans isomerase/proteolytic subunit of ClpA‑ClpP and ClpX‑ClpP ATP‑dependent serine proteases |
| ? | Exported | = 285060 | 39 (0.730) | intergenic (+160/‑86) | tig/clpP | peptidyl‑prolyl cis/trans isomerase/proteolytic subunit of ClpA‑ClpP and ClpX‑ClpP ATP‑dependent serine proteases | |||||
CGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAGGTTACAATCGGTACAGCAGGTTTTTTCAATTT > Exported/284992‑285129 | cGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACcc > 1:1650911‑M2/1‑69 (MQ=255) aaaGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACccat < 1:2149091‑M2/70‑5 (MQ=255) aaGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATaa > 1:3735263/1‑71 (MQ=255) tttCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAg < 1:3125427/69‑1 (MQ=255) tttCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAg < 1:2737743/69‑1 (MQ=255) tCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAgg < 1:1822930/68‑1 (MQ=255) ggTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACt < 1:239130/70‑1 (MQ=255) gtgtTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACt < 1:3254885/69‑1 (MQ=255) gtgtTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAg < 1:548150/71‑1 (MQ=255) aGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCt < 1:1452640/68‑1 (MQ=255) aGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCt < 1:1542144/68‑1 (MQ=255) aGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTg > 1:2614831/1‑69 (MQ=255) aGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGa > 1:3435866/1‑70 (MQ=255) aacaacAAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACcc > 1:1568694‑M2/1‑43 (MQ=255) acaacaAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAaca > 1:1798416/1‑50 (MQ=255) acaacaAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAaca > 1:3569181/1‑50 (MQ=255) acaacaAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAaca > 1:2187966/1‑50 (MQ=255) acaacaAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCg > 1:274209/1‑71 (MQ=255) acaacaAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCg > 1:1177100/1‑71 (MQ=255) aacaaAAGATTGTTATGCTTGAAATATGGTGATGCCGTA‑CCATAACACAGGGACTAGCTGATAATCCGTc > 1:995564/1‑70 (MQ=255) aacaaAAGATTGTTATGCTTGAAATATGGTGATGACGTAcaca > 1:1275781/1‑43 (MQ=38) acaaAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGc < 1:203505/58‑1 (MQ=255) acaaAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTc > 1:2358602/1‑70 (MQ=255) caaAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCa > 1:1342872/1‑71 (MQ=255) caaAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCa > 1:1482460/1‑71 (MQ=255) aaaGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTcc > 1:2283135/1‑68 (MQ=255) aaaGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATa < 1:828180/71‑1 (MQ=255) aaGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAacac > 1:552945/1‑44 (MQ=255) aGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAg < 1:958736/71‑1 (MQ=255) aGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAg > 1:1170274/1‑71 (MQ=255) gATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAgg < 1:2124606/71‑1 (MQ=255) gATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAgg < 1:1368516/71‑1 (MQ=255) tGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAGGTTa > 1:2166106/1‑71 (MQ=255) aTGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAgg < 1:2732314/64‑1 (MQ=255) gCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAGGTTACAATc < 1:3696192/70‑1 (MQ=255) cTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAGGTTACAATCg < 1:3288848/70‑1 (MQ=255) ttGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAGGTTACAATCg < 1:930079/69‑1 (MQ=255) tGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAGGTTACAATCGGt < 1:3518746/70‑1 (MQ=255) aaaTATGGTGATGCCGTACccatatttcaagcataacaatctttcggtgttagcgtaacaacaaaagaggc < 1:1787785‑M2/71‑53 (MQ=255) aaaTATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAGGTTACAATCGGTAc < 1:757110/70‑1 (MQ=255) atatGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAGGTTACAATCGGTAcag > 1:3674042/1‑70 (MQ=255) tatGGTGATGCCGTACCCATAACACAGGGACTAGCTGa > 1:1249112/1‑38 (MQ=255) tatGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATa < 1:2946797/51‑1 (MQ=255) tatGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATa < 1:119488/51‑1 (MQ=255) tatGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATa < 1:2686210/51‑1 (MQ=255) tatGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATa < 1:2039466/51‑1 (MQ=255) ggTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAGGTTACAATCGGTACAGCAGGt > 1:1230149/1‑71 (MQ=255) gTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAGGTTACAATCGGTACAGCAGGt < 1:3583427/70‑1 (MQ=255) gATGCCGTACccatatttcaagcataacaatctttt > 1:2237612‑M2/1‑10 (MQ=255) gATGCCGTACccatatttcaagcataacaatctttt > 1:3095243‑M2/1‑10 (MQ=255) gATGCCGTACccatatttcaagcataacaatctttt > 1:2409912‑M2/1‑10 (MQ=255) gATGCCGTACccatatttcaagcataacaatctttt > 1:74491‑M2/1‑10 (MQ=255) tGCCGTACccatatttcaagcataacaatcttttgt < 1:2068065‑M2/36‑29 (MQ=255) tGCCGTACccatatttcaagcataacaatcttttgt < 1:434469‑M2/36‑29 (MQ=255) tGCCGTACccatatttcaagcataacaatcttttg < 1:3030396‑M2/35‑28 (MQ=255) gCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAGGTTACAATCGGTACAGCAGGtttttt > 1:2948963/1‑70 (MQ=255) cGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAGGTTACAATCGGTACAGCAGGTTTTTTCaa > 1:139354/1‑71 (MQ=255) cGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAGGTTACAATCGGTACAGCAGGTTTTTTCaa > 1:2311222/1‑71 (MQ=255) gTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAGGTTACAATCGGTACAGCAGGTTTTTTCAAt > 1:2445592/1‑71 (MQ=255) tACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAGGTTACAATCGGTACAGCAGGTTTTTTCAAtt < 1:3626658/71‑1 (MQ=255) aCCCATAACACAGGGACTAGCTGATAATCCGTCCATAAGGTTACAATCGGTACAGCAGGTTTTTTCAAttt > 1:859576/1‑71 (MQ=255) aCCCATAACACAGGGACTAGCTGATAATCCGTCCATAAGGTTACAATCGGTACAGCAGGTTTTTTCAAttt > 1:3241162/1‑71 (MQ=255) | CGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGCCGTACCCATAACACAGGGACTAGCTGATAATCCGTCCATAAGGTTACAATCGGTACAGCAGGTTTTTTCAATTT > Exported/284992‑285129 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |