| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 1586261 = | 44 (0.750) | 4 (0.080) | 3/92 | NT | 11.0% | coding (795/972 nt) | cysK | cysteine synthase A, O‑acetylserine sulfhydrolase A subunit |
| ? | Exported | 1586289 = | 25 (0.470) | coding (823/972 nt) | cysK | cysteine synthase A, O‑acetylserine sulfhydrolase A subunit | |||||
AATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGG > Exported/1586220‑1586355 | aaTGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTgg < 1:1640391/71‑1 (MQ=255)aaTGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTgg < 1:3378501/71‑1 (MQ=255) aTGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTg > 1:945975/1‑69 (MQ=255) aTGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTg > 1:716215/1‑69 (MQ=255) agaagCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGagcag > 1:511080/1‑71 (MQ=255) gaagCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGagcagc > 1:2648049/1‑71 (MQ=255) cGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGtt < 1:2834225/71‑1 (MQ=255) ttCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTgg > 1:2717783/1‑57 (MQ=255) tCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCcgc > 1:2943939/1‑71 (MQ=255) gcgTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGa < 1:1284350/71‑1 (MQ=255) gtcTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGcaa > 1:316708/1‑68 (MQ=255) gtcTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGaaa > 1:3233757/1‑68 (MQ=255) gtcTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGaaa > 1:2666406/1‑68 (MQ=255) gtcTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTa > 1:1935620/1‑71 (MQ=255) tcTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTAc < 1:1505140/71‑1 (MQ=255) tGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGt > 1:2214125/1‑49 (MQ=255) tGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGt > 1:119801/1‑49 (MQ=255) tGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTAc > 1:3629136/1‑69 (MQ=255) gATGTAATAAGAAGGTATTCTTGCAGGTATCTCTTCTgg < 1:2703146/39‑1 (MQ=38) gATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTAc > 1:967710/1‑68 (MQ=255) aTGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCt < 1:1793869/45‑1 (MQ=255) aTGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACa < 1:1397660/68‑1 (MQ=255) tGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTg < 1:2487044/36‑1 (MQ=255) aagaagaagGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGAt < 1:2251060/71‑1 (MQ=255) aagaagaagGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGAt < 1:3119367/71‑1 (MQ=255) gaagaagGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGt > 1:661805/1‑52 (MQ=255) gaagaagGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGt > 1:2087645/1‑52 (MQ=255) gaagaagGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGa < 1:2179409/71‑1 (MQ=255) AGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCcg > 1:909959‑M1/1‑44 (MQ=255) AGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCcg > 1:2847981‑M1/1‑44 (MQ=255) gaagagatacctgcaagaataccttctGGAGCAGCTGTTGCCGCGGCGTTGAAACt < 1:2917876‑M2/29‑1 (MQ=255) gaagagatacctgcaagaataccttctGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATg > 1:3036220‑M2/28‑67 (MQ=255) agagatacctgcaagaataccttctGGAGCAGCTGTTGCCgcgg > 1:1756386‑M2/26‑44 (MQ=255) agagatacctgcaagaataccttctGGAGCAGCTGTTGCCgcgg > 1:1924735‑M2/26‑44 (MQ=255) tATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGaaa < 1:3245004/65‑1 (MQ=255) gCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACcaac < 1:207357/69‑1 (MQ=255) gCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACcaac > 1:376893/1‑69 (MQ=255) ggTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGa > 1:2210210/1‑70 (MQ=255) tcttctGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCttt < 1:3215425/54‑1 (MQ=255) tcttctGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCttt < 1:3211135/54‑1 (MQ=255) tcttctGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCttt < 1:2787037/54‑1 (MQ=255) ttctGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTAc > 1:1977309‑M2/5‑54 (MQ=255) ttctGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATAtt < 1:2215205‑M2/63‑1 (MQ=255) ttctGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTgg > 1:3080644‑M2/5‑71 (MQ=255) ttctGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTgg > 1:2728656‑M2/5‑71 (MQ=255) | AATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGG > Exported/1586220‑1586355 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |