| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 2001013 | 45 (0.760) | 8 (0.160) | 4/88 | NT | 16.0% | coding (270/1860 nt) | gss | fused glutathionylspermidine amidase and glutathionylspermidine synthetase |
| ? | Exported | = 2001023 | 45 (0.880) | coding (260/1860 nt) | gss | fused glutathionylspermidine amidase and glutathionylspermidine synthetase | |||||
GCGGCGAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACCACACCGTAATTCAGAAAGAGAAAACGGC > Exported/2000955‑2001092 | gcggcgAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAgc < 1:2020756‑M2/71‑3 (MQ=255)gcggcgAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAgc < 1:2300480‑M2/71‑3 (MQ=255)gcggcgAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAgc < 1:617620‑M2/71‑3 (MQ=255) ggcgAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAgc < 1:2569373‑M2/69‑3 (MQ=255) cgAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAgcgaga > 1:3118932‑M2/1‑65 (MQ=255) cgAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTAGCAGGAAGCGCAgcgaga > 1:3448567‑M2/1‑65 (MQ=255) aGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAgcgagaa < 1:897478‑M2/70‑8 (MQ=255) gCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGaaaa > 1:1352394/1‑71 (MQ=255) ccGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAAt < 1:1192527/71‑1 (MQ=255) aGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTcc > 1:1423424/1‑70 (MQ=255) ggAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCa < 1:3291348/71‑1 (MQ=255) gAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCa > 1:55213/1‑70 (MQ=255) aaaTGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACg < 1:2496634/71‑1 (MQ=255) aaaTGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACg < 1:1876515/71‑1 (MQ=255) aaaTGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACg > 1:1656106/1‑71 (MQ=255) aaaTGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACg > 1:1031389/1‑71 (MQ=255) aaaTGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACg > 1:649997/1‑71 (MQ=255) aTGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCTCAGCTAGAAAATCTCCCACGcc < 1:1631006/71‑1 (MQ=255) aTGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAAtct > 1:2448999/1‑63 (MQ=255) aTGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGcc < 1:600425/71‑1 (MQ=255) aTGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGc > 1:3281388/1‑70 (MQ=255) tGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCa < 1:3123029/71‑1 (MQ=255) ccTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAgcgaga > 1:643665‑M2/1‑48 (MQ=255) cTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATAc > 1:1824561/1‑71 (MQ=255) tGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTccc < 1:3081993/61‑1 (MQ=255) tGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTccc < 1:3086132/61‑1 (MQ=255) tGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTccc < 1:2165832/61‑1 (MQ=255) tGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGcc < 1:1277991/66‑1 (MQ=255) gCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATAcc > 1:2871036/1‑70 (MQ=255) cAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAgcga > 1:581787‑M2/1‑44 (MQ=255) cAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAgcga > 1:1490247‑M2/1‑44 (MQ=255) aaTGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCAc < 1:1350364/71‑1 (MQ=255) aTGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACg > 1:1294136/1‑71 (MQ=255) ggATGTTGTCATTAACCACTTCTCGCAGGAAGCGCa < 1:2967030/36‑1 (MQ=255) ggATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTa < 1:230187/71‑1 (MQ=255) aTGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTa > 1:1561662/1‑69 (MQ=255) tgtCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGAc > 1:501466/1‑70 (MQ=255) gtCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAAtctca > 1:1520067/1‑42 (MQ=255) tCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTcc < 1:2938197/42‑1 (MQ=255) tCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTcc < 1:2554723/42‑1 (MQ=255) cATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTcc < 1:347063/41‑1 (MQ=255) cATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACcaca > 1:2973673/1‑71 (MQ=255) aTTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACcaca < 1:864740/70‑1 (MQ=255) ccACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACCACACCGTaa > 1:1017449/1‑71 (MQ=255) cACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACCACACCGTAAt > 1:2586396/1‑71 (MQ=255) cTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACCACACCGTAAtt > 1:2634720/1‑70 (MQ=255) cTTCTCGCAGGAAGAGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACCACACCGTAAtt > 1:2017685/1‑70 (MQ=255) ttCTCGCAGGAAGCGCAgcgagaagtggttaatgacaacatcctgccattgcaggcatttcctaacggctc < 1:507104‑M2/71‑55 (MQ=255) ttCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCa > 1:96090/1‑38 (MQ=255) ttCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCAc > 1:2389575/1‑45 (MQ=255) ctcGCAGGAAGCGCAgcgagaagtggttaatgacaacatcc > 1:773432‑M2/1‑15 (MQ=255) ctcGCAGGAAGCGCAgcgagaagtggttaatgacaacatcc > 1:222481‑M2/1‑15 (MQ=255) ctcGCAGGAAGCGCAGCGAGAAAATCTCCCACGcc > 1:1175199/1‑35 (MQ=255) ctcGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACCACACCGTAATTCa < 1:2424191/69‑1 (MQ=255) ctcGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACCACACCGTAATTCAg > 1:1013974/1‑70 (MQ=255) ctcGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACCACACCGTAATTCAg > 1:1784347/1‑70 (MQ=255) ctcGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACCACACCGTAATTCAg > 1:219578/1‑70 (MQ=255) tcGCAGGAAGCGCAgcgagaagtggttaatgacaacatcctgccattgcaggcatttcctaacggctcgc < 1:293797‑M2/70‑57 (MQ=255) cGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACCACACCGTAATTCAGa > 1:2121076/1‑69 (MQ=255) cGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACCACACCGTAATTCAGa > 1:139210/1‑69 (MQ=255) cGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACCACACCGTAATTCAGa > 1:3069303/1‑69 (MQ=255) gCAGGAAGCGCAgcgagaagtggttaatgacaacatcctgccattgcagg > 1:1521244‑M2/1‑12 (MQ=255) gCAGGAAGCGCAgcgagaagtggttaatgacaacatcctgccattgcagg > 1:2373035‑M2/1‑12 (MQ=255) gCAGGAAGCGCAgcgagaagtggttaatgacaacatcctgccattgcagg > 1:1206399‑M2/1‑12 (MQ=255) gCAGGAAGCGCAgcgagaagtggttaatgacaacatcctgccattgcagg > 1:2483014‑M2/1‑12 (MQ=255) gCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACCACACCGTAATTCAGAAag < 1:1860806/71‑1 (MQ=255) aGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACCACACCGTAATTCAGaaa > 1:1863095/1‑68 (MQ=255) gcAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACCACACCGTAATTCAGAAAGAGaaaa < 1:1368416/68‑1 (MQ=255) cAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACCACACCGTAATTCAGaaa < 1:1231390/60‑1 (MQ=255) cAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACCACACCGTAATTCAGAAAGAGAAAACGGc < 1:2285263/71‑1 (MQ=255) | GCGGCGAGCCGTTAGGAAATGCCTGCAATGGCAGGATGTTGTCATTAACCACTTCTCGCAGGAAGCGCAGCGAGAAAATCTCCCACGCCATACCCACGTCAGTAAAGACCACACCGTAATTCAGAAAGAGAAAACGGC > Exported/2000955‑2001092 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |