| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 2318657 = | 62 (1.050) | 5 (0.090) | 4/94 | NT | 8.7% | coding (282/300 nt) | yiiS | conserved hypothetical protein |
| ? | Exported | 2318677 = | 48 (0.880) | coding (262/300 nt) | yiiS | conserved hypothetical protein | |||||
AGCCATGTTTAACTCCTTCTAAAGCAACTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTCCAGATCCTTAATCTTATAG > Exported/2318607‑2318747 | aGCCATGTTTAACTCCTTCTAAAGCAACTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAatcat < 1:95644/71‑1 (MQ=255) tGTTTAACTCCTTCTAAAGCAACTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCgg < 1:3557372/71‑1 (MQ=255) tttAACTCCTTCTAAAGCAACTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGcc > 1:2232204/1‑71 (MQ=255) tttAACTCCTTCTAAAGCAACTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGcc > 1:1473073/1‑71 (MQ=255) aCTCCTTCTAAAGCAACTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTgg > 1:130593/1‑70 (MQ=255) tCCTTCTAAAGCAACTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCAt > 1:1171895/1‑71 (MQ=255) ccTTCTAAAGCAACTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCAtctc > 1:2035587/1‑60 (MQ=255) ccTTCTAAAGCAACTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCAt > 1:2839557/1‑70 (MQ=255) cTTCTAAAGCAACTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAatcat > 1:642121/1‑56 (MQ=255) cTTCTAAAGCAACTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAatcat > 1:2021985/1‑56 (MQ=255) cTTCTAAAGCAACTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATg < 1:2439219/70‑1 (MQ=255) gatgcggccttcactttctcatgccaggccgagaTGATAACTCAAAAATAatcat < 1:2137875‑M1/21‑1 (MQ=255) gatgcggccttcactttctcatgccaggccgagaTGATAACTCAAAAATAatcat < 1:1341136‑M1/21‑1 (MQ=255) cTAAAGCAACTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATgaga > 1:3631725/1‑70 (MQ=255) aGCAACTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTg < 1:3444465/71‑1 (MQ=255) aaCTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAg > 1:848657/1‑71 (MQ=255) aaCTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAg > 1:950873/1‑71 (MQ=255) aaCTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAg > 1:3267061/1‑71 (MQ=255) aCTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAgg > 1:469775/1‑71 (MQ=255) cTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGc < 1:2424691/71‑1 (MQ=255) cATCAAGCTAACGAATGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCg > 1:3137288/1‑70 (MQ=255) cATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGcc < 1:2761798/69‑1 (MQ=255) cATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCg > 1:2305410/1‑70 (MQ=255) aTCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCa < 1:754349/71‑1 (MQ=255) aTCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCa < 1:2275471/71‑1 (MQ=255) tCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCg < 1:3597156/68‑1 (MQ=255) tCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCg < 1:969253/68‑1 (MQ=255) tCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCAt > 1:1287677/1‑71 (MQ=255) cAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCAt > 1:3266741/1‑70 (MQ=255) cAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCAt > 1:3221300/1‑70 (MQ=255) aaGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGaa > 1:2071025/1‑61 (MQ=255) aaGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGaa > 1:2885603/1‑61 (MQ=255) aaGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGaa > 1:26192/1‑61 (MQ=255) aaGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCa < 1:2527022/71‑1 (MQ=255) aacgaacgCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCt > 1:1994834/1‑70 (MQ=255) aacgaacgCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCt > 1:3459191/1‑70 (MQ=255) acgaacgCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCAt < 1:829000/44‑1 (MQ=255) acgaacgCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAg > 1:1698448/1‑51 (MQ=255) acgaacgCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCa < 1:2026685/71‑1 (MQ=255) acgaacgCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCa < 1:1037670/71‑1 (MQ=255) aacgCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACt > 1:312251/1‑71 (MQ=255) acgCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAg > 1:1121469/1‑63 (MQ=255) acgCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAg > 1:1535859/1‑63 (MQ=255) acgCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGAATCAAg > 1:1399606/1‑63 (MQ=255) gCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGcc < 1:3345916/53‑1 (MQ=255) cAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATg < 1:611336/38‑1 (MQ=255) cAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTg < 1:1253211/46‑1 (MQ=255) cAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTg < 1:1522518/46‑1 (MQ=255) gTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTg > 1:121579/1‑67 (MQ=255) gTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTg > 1:3587516/1‑67 (MQ=255) atgattatttttgagttatcaTCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATc < 1:1341136‑M2/34‑1 (MQ=255) atgattatttttgagttatcaTCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATc < 1:2137875‑M2/34‑1 (MQ=255) TGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTg > 1:2023689‑M1/1‑43 (MQ=255) TGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAgg > 1:1765933‑M1/1‑47 (MQ=255) TGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCt < 1:46800‑M1/71‑1 (MQ=255) gattatttttgagttatcaTCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCaa > 1:1464452‑M2/20‑55 (MQ=255) GATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTc < 1:2640899‑M1/71‑1 (MQ=255) ATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTcc > 1:457984‑M1/1‑71 (MQ=255) ATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTc < 1:1439636‑M1/70‑1 (MQ=255) ATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTc < 1:3029573‑M1/70‑1 (MQ=255) ATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTc < 1:1937938‑M1/70‑1 (MQ=255) TAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTc < 1:2234879‑M1/69‑1 (MQ=255) tatttttgagttatcaTCTCGGCCTGGCATGAGaa < 1:1734272‑M2/19‑1 (MQ=255) tatttttgagttatcaTCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAAc < 1:356955‑M2/43‑1 (MQ=255) cTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTCCAGAt < 1:3470019/71‑1 (MQ=255) cTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTCCAGAt < 1:2495024/71‑1 (MQ=255) aaaaaTAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCaa > 1:2184365/1‑53 (MQ=255) aaaaaTAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCaa > 1:3120326/1‑53 (MQ=255) aaaTAATCATCTCGGCCTGGCATGAGAAAGTGAAg > 1:3412754/1‑35 (MQ=255) aaaTAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTCCAGATCCtt > 1:1566068/1‑70 (MQ=255) taatCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTCCAg < 1:2225689/61‑1 (MQ=255) atcaTCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTCCAGAt > 1:1732762‑M2/5‑61 (MQ=255) atcaTCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTCCAGAt > 1:2597973‑M2/5‑61 (MQ=255) atcaTCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTCCAGATCCTTAATCtt < 1:491670‑M2/67‑1 (MQ=255) atcaTCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTCCAGATCCTTAATCt < 1:450116‑M2/66‑1 (MQ=255) atcaTCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTCCAGATCCTTAATCt < 1:2344718‑M2/66‑1 (MQ=255) atcaTCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTCCAGATCCTTAATCt < 1:3567738‑M2/66‑1 (MQ=255) aTCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTCCAGATCCTTAATCTtata < 1:507003‑M2/70‑1 (MQ=255) tctcGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTCCAGATCCTTAATCTTATAg > 1:2500589/1‑71 (MQ=255) | AGCCATGTTTAACTCCTTCTAAAGCAACTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGCATCAAGCTCAACTTGCCCCTCCAGATCCTTAATCTTATAG > Exported/2318607‑2318747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |