| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 2325828 = | 53 (0.900) | 5 (0.090) | 3/98 | NT | 10.4% | coding (258/501 nt) | cpxP | periplasmic protein combats stress |
| ? | Exported | 2325853 = | 35 (0.620) | coding (233/501 nt) | cpxP | periplasmic protein combats stress | |||||
TTTTCTGCCTGTGCGCGCACAGCGTTTTCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGCCTGTTGCATAAGATCTCGCATCTGCTGACG > Exported/2325784‑2325920 | ttttCTGCCTGTGCGCGCACAGCGTTTTCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAg > 1:1945696/1‑71 (MQ=255) tCTGCCTGTGCGCGCACAGCGTTTTCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTc > 1:3026780/1‑71 (MQ=255) ccTGTGCGCGCACAGCGTTTTCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCt < 1:1128447/70‑1 (MQ=255) ccTGTGCGCGCACAGCGTTTTCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCt < 1:2716220/70‑1 (MQ=255) tgtgCGCGCACAGCGTTTTCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTaa < 1:3244405/70‑1 (MQ=255) tgCGCGCACAGCGTTTTCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACa < 1:1827265/70‑1 (MQ=255) cgcgcACAGCGTTTTCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACAtt > 1:1371126/1‑70 (MQ=255) cgcgcACAGCGTTTTCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACATTa < 1:2245418/71‑1 (MQ=255) gcgcACAGCGTTTTCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACATTaa < 1:1082301/71‑1 (MQ=255) gcgcACAGCGTTTTCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACATTaa < 1:594290/71‑1 (MQ=255) gcgcACAGCGTTTTCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACATTa < 1:626586/70‑1 (MQ=255) gcACAGCGTTTTCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACATTAAc < 1:744600/70‑1 (MQ=255) cacaGCGTTTTCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACATTAACag < 1:906677/71‑1 (MQ=255) cacaGCGTTTTCATCAAAATTTTCTCCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACATTAACa > 1:112324/1‑70 (MQ=255) caGCGTTTTCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACATTAACagga < 1:2180064/71‑1 (MQ=255) gTTTTCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACATTAACAGGAGGCt > 1:2901437/1‑71 (MQ=255) ttttCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACATTAACAGGAGGCt < 1:3602809/70‑1 (MQ=255) tttCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACATTAACAGGAGGCTGt > 1:665961/1‑71 (MQ=255) tcatcaAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGtt < 1:3109061/46‑1 (MQ=255) tcatcaAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACAtt > 1:862461/1‑56 (MQ=255) catcaAAATTTTCTGCGGTTACAAGGCGATGCATTGTCTCCAGTTCGCt > 1:2153465/1‑49 (MQ=255) catcaAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGtt < 1:2500520/45‑1 (MQ=255) aaaaTTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACATTAACAGGAGGCTGt < 1:438595/64‑1 (MQ=255) cTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGCCTg < 1:3723179/70‑1 (MQ=255) cGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAAAATTAACAGGAGGCTGTTCGTGCCGGGCCTGTTGc < 1:3461421/71‑1 (MQ=255) GGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGCCTGTTGCa > 1:1640946‑M1/1‑71 (MQ=255) gagacaatgcatcgccttgtcaccAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCggg < 1:2428500‑M2/37‑1 (MQ=255) gagacaatgcatcgccttgtcaccAGTTCGCTAACATTAACACGAGGCTGTTCGTGCCGGGCCTGTTGCa > 1:628213‑M2/25‑70 (MQ=255) tGACAAGGCGATGCATTGTCTCCAGTTCGCAAACATTa > 1:2022594/1‑38 (MQ=255) gacaatgcatcgccttgtcaccAGTTCGCTAACATTAACagg > 1:1242766‑M2/23‑42 (MQ=255) gacaatgcatcgccttgtcaccAGTTCGCTAACATTAACAGGAGGCTg > 1:2070307‑M2/23‑48 (MQ=255) gacaatgcatcgccttgtcaccAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGcc > 1:3053692‑M2/23‑61 (MQ=255) aCAAGGCGATGCATTGTCTCCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGCCTGTTGCATaa < 1:2971352/70‑1 (MQ=255) aGGCGATGCATTGTCTCCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGCCTGTTGCATaa > 1:1863958/1‑67 (MQ=255) aGGCGATGCATTGTCTCCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGCCTGTTGCATAAGAtc < 1:1583429/71‑1 (MQ=255) ggCGATGCATTGTCTCCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGCCTGTTGCATAAGAtct > 1:1393384/1‑71 (MQ=255) cGATGCATTGTCTCCAGTTCGCTAACATTAACATGAGGCTGTTCGTGCCGGGCCTGTTGCATAAGATCTCg < 1:1693658/71‑1 (MQ=255) cGATGCATTGTCTCCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGCCTGTTGCATAAGATCTCg < 1:2189931/71‑1 (MQ=255) gATGCATTGTCTCCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGCCTGTTGCATAAGATCTCg < 1:3318722/70‑1 (MQ=255) aTGCATTGTCTCCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGCCTGTTGCATAAGATCTCGc < 1:162110/70‑1 (MQ=255) aTGCATTGTCTCCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGCCTGTTGCATAAGATCTCGCa < 1:1938241/71‑1 (MQ=255) cATTGTCTCCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGCCTGTTGCAt < 1:850199/57‑1 (MQ=255) ttGTCTCCAGTTCGCTAACATTAACAGGAGGCTGt < 1:2217171/35‑1 (MQ=255) ttGTCTCCAGTTCGCTAACATTAACAGGAGGCTGt < 1:186597/35‑1 (MQ=255) ttGTCTCCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGCCTGTTGCATAAGATCTCGCATctg < 1:180864/70‑1 (MQ=255) tGTCTCCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGCCTGTTGCATAAGATCTCGCATctgct > 1:3290505/1‑71 (MQ=255) gTCTCCAGTTCGCTAACATTAACAGGAGGCTGTTCGt > 1:2184177/1‑37 (MQ=255) gTCTCCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGCCTGTTGCATAAGATCTCGCATctgct < 1:1301184/70‑1 (MQ=255) gTCTCCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGCCTGTTGCATAAGATCTCGCATctgct > 1:692710/1‑70 (MQ=255) ctcCAGTTCGCTAACATTAACAGGAGGCTGTTCGTTCCg > 1:1089221/1‑39 (MQ=255) ctcCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGcc > 1:985115/1‑38 (MQ=255) ctcCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCg > 1:443621/1‑39 (MQ=255) ctcCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCg > 1:3246520/1‑39 (MQ=255) ctcCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCg > 1:1823883/1‑39 (MQ=255) cAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGCCTGTTGCATAAGATCTCGCATCTGCTGACg < 1:1657574‑M2/68‑1 (MQ=255) | TTTTCTGCCTGTGCGCGCACAGCGTTTTCATCAAAATTTTCTGCGGTGACAAGGCGATGCATTGTCTCCAGTTCGCTAACATTAACAGGAGGCTGTTCGTGCCGGGCCTGTTGCATAAGATCTCGCATCTGCTGACG > Exported/2325784‑2325920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |