| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 2406152 = | 45 (0.760) | 8 (0.160) | 4/88 | NT | 16.0% | coding (1309/2547 nt) | cyaA | adenylate cyclase |
| ? | Exported | 2406177 = | 45 (0.880) | coding (1284/2547 nt) | cyaA | adenylate cyclase | |||||
TCAGATTCGGTTCCGAGAGATCGGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTGGCGGAGACGCTA > Exported/2406113‑2406243 | tCAGATTCGGTTCCGAGAGATCGGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCa < 1:1719021/71‑1 (MQ=255) gATTCGGTTCCGAGAGATCGGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAAc > 1:1923183/1‑71 (MQ=255) gATTCGGTTCCGAGAGATCGGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAAc < 1:796081/71‑1 (MQ=255) ggTTCCGAGAGATCGGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCgg < 1:1843230/70‑1 (MQ=255) ggTTCCGAGAGATCGGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCgg < 1:3483211/70‑1 (MQ=255) gcgtaagctgtatgccgcgtttgaagcaTTACCAGCGTCACTTTACCTGGTAAt < 1:1043555‑M1/26‑1 (MQ=255) cGAGAGATCGGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATa > 1:1438372/1‑69 (MQ=255) agagaTCGGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGc > 1:1012843/1‑71 (MQ=255) gagaTCGGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCt > 1:3472969/1‑71 (MQ=255) gagaTCGGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCt > 1:3085226/1‑71 (MQ=255) gagaTCGGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCt < 1:1507847/71‑1 (MQ=255) agaTCGGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCt > 1:3141838/1‑70 (MQ=255) gaTCTGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGc < 1:2034021/49‑1 (MQ=255) gaTCGGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGc < 1:1317636/49‑1 (MQ=255) gaTCGGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGc < 1:342431/49‑1 (MQ=255) aTCGGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTAc < 1:2984884/71‑1 (MQ=255) aTCGGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTAc < 1:489444/71‑1 (MQ=255) cGGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTAcgc > 1:2855619/1‑71 (MQ=255) ggTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGt > 1:1220254/1‑71 (MQ=255) tGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGt > 1:1529197/1‑69 (MQ=255) tGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGt > 1:332817/1‑69 (MQ=255) aaaTCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAAc < 1:941930/47‑1 (MQ=255) aaaTCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTAc > 1:2361052/1‑63 (MQ=255) aaaTCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAg < 1:3376015/70‑1 (MQ=255) aTCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCa > 1:812368/1‑70 (MQ=255) aTCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTAAAACGCGGCATACAGCTTACGCGTCAGCAc > 1:1476213/1‑71 (MQ=255) tGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGcc > 1:1719522/1‑71 (MQ=255) tGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGcc > 1:3715177/1‑71 (MQ=255) tGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGcc > 1:452209/1‑71 (MQ=255) tGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGc > 1:2515758/1‑70 (MQ=255) gCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGcc > 1:461001/1‑70 (MQ=255) cGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTc < 1:3245899/36‑1 (MQ=255) cGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTc < 1:3187693/36‑1 (MQ=255) cGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGa > 1:2072486/1‑71 (MQ=255) cGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGa > 1:429940/1‑71 (MQ=255) ggTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGata > 1:1205743/1‑71 (MQ=255) gTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATa > 1:3324246/1‑45 (MQ=255) gTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATa > 1:2524465/1‑45 (MQ=255) attaccaggtaaagtgacgctggtaaTGCTTCAAACGCGGCATACAGCTTAcgc < 1:1043555‑M2/28‑1 (MQ=255) TTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATcc < 1:1017830‑M1/71‑1 (MQ=255) TACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCt < 1:2081831‑M1/71‑1 (MQ=255) TACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCt < 1:2249769‑M1/71‑1 (MQ=255) CCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTg > 1:636343‑M1/1‑70 (MQ=255) caggtaaagtgacgctggtaaTGCTTCAAACTCGGCATACa < 1:2683955‑M2/20‑1 (MQ=255) caggtaaagtgacgctggtaaTGCTTCAAACGCGGCATACa < 1:1861959‑M2/20‑1 (MQ=255) caggtaaagtgacgctggtaaTGCTTCAAACGCGGCATACa < 1:1660701‑M2/20‑1 (MQ=255) caggtaaagtgacgctggtaaTGCTTCAAACGCGGCATACa < 1:260419‑M2/20‑1 (MQ=255) aggtaaagtgacgctggtaaTGCTTCAAACGCGGCATACAGCTTAc > 1:1473600‑M2/21‑46 (MQ=255) ggtaaagtgacgctggtaaTGCTTCAAACGCGGCATACAGc > 1:627290‑M2/20‑41 (MQ=255) ggtaaagtgacgctggtaaTGCTTCAAACGCGGCATACAGc > 1:783877‑M2/20‑41 (MQ=255) cGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGAc < 1:1060493/71‑1 (MQ=255) gTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGCACt > 1:1260692/1‑71 (MQ=255) tCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTg > 1:74787/1‑71 (MQ=255) tCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGAACGCCGATATCCTGCGGACTg > 1:1717758/1‑71 (MQ=255) cACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTgg > 1:2335880/1‑71 (MQ=255) cACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTgg > 1:286216/1‑71 (MQ=255) cACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTgg > 1:2131858/1‑71 (MQ=255) cACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTgg > 1:527637/1‑71 (MQ=255) aCTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTGGc < 1:1758724/71‑1 (MQ=255) aCTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTGGc > 1:676342/1‑71 (MQ=255) cTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTGGCg < 1:2194826/71‑1 (MQ=255) tttACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCa < 1:116600/47‑1 (MQ=255) tttACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCa < 1:112424/47‑1 (MQ=255) ttACCTGGTAATGCTTCAAACGCGGCATACAGCTTAcgc > 1:949904/1‑39 (MQ=255) ttACCTGGTAATGCTTCAAACGCGGCATACAGCTTAcgc > 1:1244980/1‑39 (MQ=255) ttACCTGGTAATGCTTCAAACGCGGCATACAGCTTAcgc > 1:1452531/1‑39 (MQ=255) ccTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCa < 1:1822648/43‑1 (MQ=255) gtaaTGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTg < 1:3178823‑M2/55‑1 (MQ=255) gtaaTGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTGGCGGAGACGCt < 1:2820890‑M2/66‑1 (MQ=255) gtaaTGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTGGCGGAGACGCTa < 1:1538273‑M2/67‑1 (MQ=255) gtaaTGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTGGCGGAGACGCTa < 1:3287615‑M2/67‑1 (MQ=255) gtaaTGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTGGCGGAGACGCTa < 1:2609900‑M2/67‑1 (MQ=255) | TCAGATTCGGTTCCGAGAGATCGGGTGAAATCTGCGGGTTTACCAGCGTCACTTTACCTGGTAATGCTTCAAACGCGGCATACAGCTTACGCGTCAGCACGCCGATATCCTGCGGACTGGCGGAGACGCTA > Exported/2406113‑2406243 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |