BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Exported	= 2478618	76 (1.290)	4 (0.080)	3/88	NT	5.6%	coding (591/774 nt)	pstB	phosphate transporter subunit
*	?	Exported	= 2478641	70 (1.380)	4 (0.080)	3/88	NT	5.6%	coding (614/774 nt)	pstB	phosphate transporter subunit

Only 100 of 104 total aligned reads displayed.

CGGCGCTCGACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACCACACGGCGTTTATGTACCTGGGC  >  Exported/2478572‑2478711

cGGCGCTCGACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCgt                                                                        <  1:1823544/70‑1 (MQ=255)

   cgcTCGACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTggt                                                                     <  1:397918‑M2/70‑4 (MQ=255)

   cgcTCGACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTggt                                                                     <  1:3387951‑M2/70‑4 (MQ=255)

    gcTCGACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTggtga                                                                   >  1:857496‑M2/1‑66 (MQ=255)

    gcTCGACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTggtga                                                                   <  1:288806‑M2/71‑6 (MQ=255)

    gcTCGACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTggtga                                                                   <  1:1286460‑M2/71‑6 (MQ=255)

     cTCGACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTggtgat                                                                  >  1:638725‑M2/1‑65 (MQ=255)

      tCGACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTggtgatc                                                                 <  1:1303714‑M2/71‑8 (MQ=255)

      tCGACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTggtgatc                                                                 <  1:3681901‑M2/71‑8 (MQ=255)

       cGACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCg                                                                >  1:2906813/1‑71 (MQ=255)

       cGACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCg                                                                >  1:2936023/1‑71 (MQ=255)

        gACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTggtgatc                                                                 >  1:65970‑M2/1‑62 (MQ=255)

        gACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTggtgatc                                                                 >  1:2253223‑M2/1‑62 (MQ=255)

        gACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGt                                                               <  1:272548/71‑1 (MQ=255)

        gACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGt                                                               <  1:3242654/71‑1 (MQ=255)

             tATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCAcc                                                           >  1:1281059/1‑70 (MQ=255)

             tATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCAcc                                                           >  1:2721251/1‑70 (MQ=255)

             tATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCAcc                                                           >  1:2025291/1‑70 (MQ=255)

                ctctACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCcac                                                        >  1:1982458/1‑70 (MQ=255)

                  ctACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCca                                                         >  1:1837060/1‑67 (MQ=255)

                  ctACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCca                                                         >  1:3156114/1‑67 (MQ=255)

                  ctACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCca                                                         >  1:1781545/1‑67 (MQ=255)

                     ccGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCacaaca                                                    <  1:23658/69‑1 (MQ=255)

                     ccGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCacaaca                                                    <  1:324846/69‑1 (MQ=255)

                      cGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCacaacgcg                                                  >  1:92884/1‑67 (MQ=255)

                      cGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATgc                                                 <  1:1824909/71‑1 (MQ=255)

                      cGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATgc                                                 <  1:1993550/71‑1 (MQ=255)

                       gggCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCacaacgcg                                                  >  1:2107076/1‑66 (MQ=255)

                       gggCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCacaacgcg                                                  >  1:335513/1‑66 (MQ=255)

                       gggCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATgca                                                <  1:1583127/71‑1 (MQ=255)

                             aTTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCgt                                                                        <  1:1197569/41‑1 (MQ=255)

                             aTTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCgt                                                                        <  1:3436135/41‑1 (MQ=255)

                             aTTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCgt                                                                        <  1:3310321/41‑1 (MQ=255)

                              ttGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCt                                         >  1:83090/1‑71 (MQ=255)

                              ttGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCt                                         >  1:1821378/1‑71 (MQ=255)

                              ttGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCt                                         >  1:1793789/1‑71 (MQ=255)

                               tGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTgg                                                                      <  1:3071203‑M2/41‑3 (MQ=255)

                               tGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTgg                                                                      <  1:2204895‑M2/41‑3 (MQ=255)

                               tGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTg                                                                       >  1:178820‑M2/1‑39 (MQ=255)

                               tGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTg                                        >  1:1188218/1‑71 (MQ=255)

                                gAAGAGGTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTgc                                       >  1:478528/1‑71 (MQ=255)

                                gAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTgc                                       >  1:874054/1‑71 (MQ=255)

                                gAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTgc                                       >  1:1052435/1‑71 (MQ=255)

                                gAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTg                                        <  1:1522424/70‑1 (MQ=255)

                                gAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTg                                        <  1:757978/70‑1 (MQ=255)

                                  agagCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTgcgc                                     >  1:3157740/1‑71 (MQ=255)

                                   gagCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGt                                                               <  1:2213602/44‑1 (MQ=255)

                                   gagCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGt                                                               <  1:2463454/44‑1 (MQ=255)

                                   gagCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGcgcg                                    >  1:78695/1‑71 (MQ=255)

                                   gagCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGcgcg                                    <  1:1563879/71‑1 (MQ=255)

                                    agCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCgt                                   <  1:352/71‑1 (MQ=255)

                                     gCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCgtt                                  >  1:3551315/1‑71 (MQ=255)

                                     gCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCgtt                                  >  1:1473230/1‑71 (MQ=255)

                                     gCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGAGCgtt                                  <  1:61583/71‑1 (MQ=255)

                                      cTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCgttg                                 <  1:1537297/71‑1 (MQ=255)

                                         aTCACCGAACTGAAGCAGGATTACACCGTggtgatcagctcttcaa                                                       >  1:3337843‑M2/1‑29 (MQ=255)

                                         aTCACCGAACTGAAGCAGGATTACACCGTggtgatcagctcttcaa                                                       >  1:2273638‑M2/1‑29 (MQ=255)

                                         aTCACCGAACTGAAGCAGGATTACACCGTGGTGATCGt                                                               <  1:2236861/38‑1 (MQ=255)

                                         aTCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACGCGCAGCCTGCTGCAtgttgtg                               <  1:1002776/70‑2 (MQ=21)

                                         aTCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTgcg                                      >  1:3549138/1‑63 (MQ=255)

                                         aTCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCgttgt                                <  1:1709888/69‑1 (MQ=255)

                                         aTCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCgtt                                  <  1:2464268/67‑1 (MQ=255)

                                         aTCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCgtt                                  <  1:2063285/67‑1 (MQ=255)

                                         aTCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCgtt                                  <  1:543053/67‑1 (MQ=255)

                                         aTCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCgtt                                  <  1:2705084/67‑1 (MQ=255)

                                         aTCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCgtt                                  <  1:2096843/67‑1 (MQ=255)

                                          tCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTcc                             <  1:1402704/71‑1 (MQ=255)

                                           cACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATg                                                  >  1:3210447/1‑49 (MQ=255)

                                           cACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTcc                             >  1:2754569/1‑70 (MQ=255)

                                            aCCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGa                           >  1:1526275/1‑71 (MQ=255)

                                            aCCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGa                           >  1:2159615/1‑71 (MQ=255)

                                             ccGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGAc                          <  1:108199/71‑1 (MQ=255)

                                              cGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGAc                          >  1:1290548/1‑70 (MQ=255)

                                               gAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACca                        <  1:1296353/71‑1 (MQ=255)

                                               gAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACca                        <  1:2648952/71‑1 (MQ=255)

                                                aaCTGAAGCAGGATTACACCGTggtgatcagctcttcaatacgcccggtagagatagtgtc                                 >  1:3571928‑M2/1‑22 (MQ=255)

                                                 aCTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACcaca                      >  1:1310126/1‑71 (MQ=255)

                                                 aCTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACcaca                      >  1:2090664/1‑71 (MQ=255)

                                                  cTGAAGCAGGATTACACCGTggtgatcagctcttcaatacgcccggtagagatagggtcga                               <  1:2402061‑M2/61‑42 (MQ=255)

                                                  cTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACCacac                     >  1:3188051/1‑71 (MQ=255)

                                                    gAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGa                           >  1:1010634/1‑63 (MQ=255)

                                                    gAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGa                           >  1:809991/1‑63 (MQ=255)

                                                    gAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGa                           >  1:2431694/1‑63 (MQ=255)

                                                    gAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACCACACgg                   >  1:3609950/1‑71 (MQ=255)

                                                    gAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACCACACgg                   >  1:1953481/1‑71 (MQ=255)

                                                    gAAGCAGGATTACACCGTGGTGATCGTCAACCACAACATGCAGCAGGCTGCGCGTTGTTCCGa                           >  1:350150/1‑63 (MQ=255)

                                                     aaGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACCACACGGc                  >  1:2841821/1‑71 (MQ=255)

                                                         aGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACCACACGGCGttt              <  1:1585584/71‑1 (MQ=255)

                                                          ggATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACCACACGGCGTTTa             >  1:917619/1‑71 (MQ=255)

                                                           gATTACACCGTGGTGATCGTCACCCACAACATgcag                                               <  1:3070863/36‑1 (MQ=255)

                                                             ttACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACCACACGGCGTTTATg           >  1:1722853/1‑70 (MQ=255)

                                                                cacCGTGGTGATCGTCACCCACAACATGCAGCAgg                                           >  1:2896000/1‑35 (MQ=255)

                                                                cacCGTGGTGATCGTCACCCACAACATGCAGCAgg                                           >  1:924610/1‑35 (MQ=255)

                                                                cacCGTGGTGATCGTCACCCACAACATGCAGCAgg                                           >  1:1324187/1‑35 (MQ=255)

                                                                cacCGTGGTGATCGTCACCCACAACATGCAGCAgg                                           >  1:968972/1‑35 (MQ=255)

                                                                 acCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACCACACGGCGTTTATGTACCt      <  1:2797718/71‑1 (MQ=255)

                                                                 acCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACCACACGGCGTTTATGTACCt      <  1:3654007/71‑1 (MQ=255)

                                                                   cGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACCACACGGCGTTTATGTACCTgg    <  1:3502261/71‑1 (MQ=255)

                                                                     tggtgATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACCACACGGCGTTTATGTACCTGGGc  >  1:2674074/1‑71 (MQ=255)

                                                                     tggtgATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACCACACGGCGTTTATGTACCTGGGc  <  1:1545287/71‑1 (MQ=255)

CGGCGCTCGACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACCACACGGCGTTTATGTACCTGGGC  >  Exported/2478572‑2478711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.