| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | Exported | 801,414 | A→G | 53.1% | S186S (AGT→AGC) | dhaL ← | dihydroxyacetone kinase, C‑terminal domain |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Exported | 801,414 | 0 | A | G | 53.1% | 7.6 / 65.0 | 49 | S186S (AGT→AGC) | dhaL | dihydroxyacetone kinase, C‑terminal domain |
| Reads supporting (aligned to +/- strand): ref base A (11/12); new base G (12/14); total (23/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGCGGCTAACGCCAACATTTGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATACTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCTTGCATCGTAATCGTACTTTGTGCAGCG > Exported/801348‑801480 | tGCGGCTAACGCCAACATTTGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATACt < 1:640557/69‑1 (MQ=255) cGGCTAACGCCAACATTTGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATACTGCGt < 1:3227647/71‑1 (MQ=255) cGGCTAACGCCAACATTTGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATACTGCGt < 1:1038425/71‑1 (MQ=255) cGGCTAACGCCAACATTTGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATACTGCGt < 1:1426204/71‑1 (MQ=255) cTAACGCCAACATTTGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATACTGCGTTCa > 1:502354/1‑71 (MQ=255) cGCCAACATTTGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATGCTGCGTTCACCga < 1:3312800/71‑1 (MQ=255) cGCCAACATTTGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATGCTGCGTTCACCga < 1:1541288/71‑1 (MQ=255) cGCCAACATTTGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATGCTGCGTTCACCga < 1:308969/71‑1 (MQ=255) gCCAACATTTGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATACTGCGTTCAcc > 1:1413652/1‑68 (MQ=255) cAACATTTGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATGCTGCGTTCACCgaga > 1:2173700/1‑70 (MQ=255) aCATTTGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGCCCAATGCTGCGTTCACCGAGATaa > 1:2285922/1‑71 (MQ=255) aCATTTGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATACTGCGt > 1:130966/1‑59 (MQ=255) aCATTTGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATACTGCGTTCACCGAGATaa < 1:1197867/71‑1 (MQ=255) cATTTGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATGCTGCGtt < 1:2730717/59‑1 (MQ=255) tttGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATACTGCGTTCACCGAGATAACTg > 1:282632/1‑71 (MQ=255) ttGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATa > 1:3119515/1‑49 (MQ=255) ttGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATACTGCGTTCACCGAGATAACTg > 1:2542898/1‑70 (MQ=255) catAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATGCTGCGTTCACCGAGATAACTGGCGCGGc > 1:2657089/1‑71 (MQ=255) catAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATGCTGCGTTCACCGAGATAACTGGCGCGGc > 1:1877207/1‑71 (MQ=255) aaaCATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATACTGCGTTCACCGAGATAACTGGCGCGGCCtt > 1:2590730/1‑71 (MQ=255) aaCATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATGCTGCGTTCACCGAGATAACTGGCGCGGCCttt < 1:2054963/71‑1 (MQ=255) aaCATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATGCTGCGTTCACCGAGATAACTGGCGCGGCCttt < 1:1372414/71‑1 (MQ=255) aaCATCACCGAGGTCGCACCGGGATCCTGGTAACCAATGCTGCGTTCACCGAGATAACTGGCGCGGCCttt < 1:1387929/71‑1 (MQ=255) cACCGAGGTCGCGCCGGGATCCTGGTGACCAATACTGc < 1:3665787/38‑1 (MQ=255) cACCGAGGTCGCGCCGGGATCCTGGTGACCAATACTGc < 1:110968/38‑1 (MQ=255) aCCGAGGTCGCGCCGGGATCCTGGTGACCAATGCTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGc < 1:1403273/71‑1 (MQ=255) ccGAGGTCGCGCCGGGATCCTGGTGACCAATGCTGCGTTCACCgag < 1:1144559/46‑1 (MQ=255) ccGAGGTCGCGCCGGGATCCTGGTGACCAATGCTGCGTTCACCgag < 1:3598511/46‑1 (MQ=255) ccGAGGTCGCGCCGGGATCCTGGTGACCAATGCTGCGTTCACCgag < 1:3329800/46‑1 (MQ=255) cGAGGTCGCGCCGGGATCCTGGTGACCAATACTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCtt < 1:37911/71‑1 (MQ=255) gTCGCGCCGGGATCCTGGTGACCAATGCTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCTTGCat > 1:2793871/1‑71 (MQ=255) gcgcCGGGATCCTGGTGACCAATGCTGCGTTCACCGAGATAAc > 1:262879/1‑43 (MQ=255) gcgcCGGGATCCTGGTGACCAATGCTGCGTTCACCGAGATAAc > 1:2375547/1‑43 (MQ=255) cGGGATCCTGGTGACCAATACTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCTTGCatcgtaatc > 1:2097357/1‑71 (MQ=255) ggATCCTGGTGACCAATGCTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCTTGCatcgtaatcg > 1:278947/1‑70 (MQ=255) tCCTGGTGACCAATGCTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCTTGCATCGTAATCGTACt < 1:485381/71‑1 (MQ=255) cTGGTGACCAATGCTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCTTGCATCGTAATCGTACttt < 1:536259/71‑1 (MQ=255) tGGTGACCAATGCTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCTTGCATCGTAATCGTACTTtg > 1:2701589/1‑71 (MQ=255) ggTGACCAATACTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCTTGCatcg > 1:897953/1‑57 (MQ=255) ggTGACCAATACTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCTTGCatc > 1:1994328/1‑56 (MQ=255) ggTGACCAATACTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCTTGCATCGTAATCGTACt < 1:3546951/67‑1 (MQ=255) gACCAATACTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCTTGCATCGTAATCGTACTTtgtg > 1:3163649/1‑69 (MQ=255) gACCAATACTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCTTGCATCGTAATCGTACTTtgtg > 1:3032907/1‑69 (MQ=255) ccAATGCTGCGTTCACCGAGATAACTGGCGCGGCCttt < 1:680294/38‑1 (MQ=255) cAATGCTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCTTg > 1:2807847/1‑46 (MQ=255) cAATGCTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCTTg > 1:384798/1‑46 (MQ=255) cAATGCTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCTTGCATCGTAATCGTACTTTGTGCAGCg > 1:3605620/1‑71 (MQ=255) cAATACTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCTTGCATCGTAATCGTACTTTGTGCAGCg < 1:3060173/71‑1 (MQ=255) cAATACTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCTTGCATCGTAATCGTACTTTGTGCAGCg < 1:2371419/71‑1 (MQ=255) aaTACTGCGTTCACCGAGATAACTGGCGCGGCCtt < 1:438752/35‑1 (MQ=255) | TGCGGCTAACGCCAACATTTGCATCATAAACATCACCGAGGTCGCGCCGGGATCCTGGTGACCAATACTGCGTTCACCGAGATAACTGGCGCGGCCTTTGCGGGCTTGCATCGTAATCGTACTTTGTGCAGCG > Exported/801348‑801480 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |