| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 228452 | NA (NA) | 5 (0.100) | 4/94 | NT | NA | noncoding (2694/2904 nt) | rrlH | 23S ribosomal RNA |
| ? | AP009048 | = 228472 | NA (NA) | noncoding (2714/2904 nt) | rrlH | 23S ribosomal RNA | |||||
GTGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/228379‑228452‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGC < AP009048/228472‑228403 GTGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC < 1:3714106/71‑1GTGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC < 1:2790174/71‑1GTGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC < 1:2873616/71‑1GTGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC < 1:3987177/71‑1GTGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC > 1:329763/1‑71GTGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC < 1:3358660/71‑1GTGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC < 1:4692667/71‑1GTGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC < 1:1825208/71‑1GTGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC > 1:608720/1‑71GTGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATAACTGGTGTTC < 1:3566716/71‑1 TGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCG > 1:2543416/1‑71 TGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCG > 1:667130/1‑71 TGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCG < 1:170926/71‑1 TGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCG > 1:4362999/1‑71 TGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCG > 1:4941474/1‑71 TGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCG > 1:673385/1‑71 TGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC > 1:1092168/1‑70 TGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC < 1:1104289/70‑1 TGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC < 1:4668093/70‑1 TGGGCGCTGGAGAACCGAGGGGGGCTGCTCCTAGTACGAGAGGACCTGAGTGGACGCATCACTGGTGTTCG < 1:188602/71‑1 GGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGGG < 1:4139282/71‑1 GGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGGG < 1:3386484/71‑1 GGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGGG < 1:1321535/71‑1 GGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGG < 1:1256235/70‑1 TGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGGG > 1:1641488/1‑66 TGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGG < 1:4547720/65‑1 GGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC < 1:4179622/62‑1 GAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGG > 1:2464485/1‑63 GAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCG > 1:1985975/1‑62 GAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCG > 1:4655035/1‑62 GAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCG > 1:4803256/1‑62 AGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC < 1:1684636/60‑1 GAACTGAGGGGGGCTGCTCCTAGTACTAGAGGACCGGAGTGGACCCATCACTGGTGGTCGGG > 1:170876/1‑62 GAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC > 1:2060034/1‑59 GAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCG > 1:2246889/1‑55 GGGGGCTGCTCCTTGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCG < 1:2840495/52‑1 GGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGG < 1:3957903/53‑1 GGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCG > 1:1280204/1‑51 GGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGGG < 1:3801957/52‑1 TGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC < 1:4472341/45‑1 GCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGGGCAGTGCCATTGGCA > 1:4083234/1‑61 GCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC < 1:1010520/44‑1 CTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGGGCAGTGCCATTGGCATGACAACCCG > 1:937788/1‑70 CTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGGGCAGTGCCATTGGCATGACAACCCG > 1:931750/1‑70 TCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC > 1:1060508/1‑42 TCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC > 1:1696418/1‑42 TCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC > 1:4115854/1‑42 CCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGG > 1:2763986/1‑43 CCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTC < 1:774075/41‑1 CTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCG < 1:3741199/41‑1 TAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGGG > 1:2581445/1‑42 TAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGG < 1:2341630/41‑1 AGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGG > 1:4728592/1‑40 ACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGGG < 1:1856179/38‑1 CGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGGGCAGTGCCATTGGCATGACAA < 1:5096304/57‑1 GAGAGGACCGGAGTGGACGCATCACTGGTGTTCGG < 1:4105860/35‑1 GAGGACCGGAGTGGACGCATCACTGGTGTTCGGG‑‑TTGCCATTGGCATGACAAC > 1:3172018/1‑53 CGGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGC < 1:4119343/71‑1 CGGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGC < 1:662210/71‑1 CGGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGC < 1:191891/71‑1 CGGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGC < 1:569823/71‑1 CGGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGC < 1:431155/71‑1 CGGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGC < 1:795315/71‑1 CGGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGC < 1:2281061/71‑1 CGGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAG > 1:1752886/1‑70 CGGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAG > 1:4167971/1‑70 CGGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAG > 1:2742441/1‑70 CGGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTC > 1:4074614/1‑55 GGGCAGTGCCATTTGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCA < 1:3601958/71‑1 GGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCA < 1:2359893/71‑1 GGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAG > 1:3772599/1‑69 GGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTA > 1:2234959/1‑65 GGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTA > 1:4215103/1‑65 GGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTC > 1:1066948/1‑59 GGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCAC < 1:3295520/47‑1 GGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAG < 1:909574/71‑1 GGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAG > 1:4135489/1‑71 GGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTA < 1:536150/61‑1 GGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGT < 1:1278701/60‑1 GGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCT > 1:1860585/1‑57 GGCAGTGCCATTGGAATGACATCCGGAACACCAGTGATGCGTCCACTC < 1:1726399/48‑1 GCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGC < 1:5150718/71‑1 GCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGC < 1:4150079/71‑1 GCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTC < 1:2875035/52‑1 GCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCG < 1:4860714/40‑1 GTGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGCATCACTGGTGTTCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/228379‑228452‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGC < AP009048/228472‑228403 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |