New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AP009048 = 297062945 (0.800)4 (0.080) 3/94 NT 9.1% coding (377/1041 nt) tas predicted oxidoreductase, NADP(H)‑dependent aldo‑keto reductase
?AP009048 = 2970640 38 (0.730)coding (388/1041 nt) tas predicted oxidoreductase, NADP(H)‑dependent aldo‑keto reductase

TATCCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AP009048/2970579‑2970629
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctGATAAAGATCGAGGTAATCAGTCTGTAGGCGCTTGAGGCTGTCATGCAGCGCTTCGCGGATATTCTT  <  AP009048/2970640‑2970574
                                                                                                                      
TATCCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCTGATAAAGATCGAGGT                                                      <  1:5090446/66‑1
               GCATGACAGCCTCAAGCGCCTACAGACTGATTACCTGATAAAGATCGAGGTAATCA                                                 >  1:3241305/1‑56
                      AGCCTCAAGCGCCTACAGACTGATTACCTGATAAAGATCGAGGT                                                      <  1:469344/44‑1
                              GCGCCTACAGACTGATTACCTGATAAAGATCGAGGTA                                                     >  1:3749956/1‑37
                                               ACCTGATAAAGATCGAGGTAATCAGTCTGTAGGCGCTTGAGGCTGTCATGCAGCGCTTCGCGGATATTCTT  <  1:390101/71‑1
                                               ACCTGATAAAGATCGAGGTAATCAGTCTGTAGGCGCTTGAGGCTGTCATGCAGCGCTTCGCGGATATTCTT  <  1:469483/71‑1
                                               ACCTGATAAAGATCGAGGTAATCAGTCTGTAGGCGCTT                                   <  1:3787086/38‑1
                                                CCTGATAAAGATCGAGGTAATCAGTCTGTAGGCGCTTGA                                 >  1:4591917/1‑39
                                                                                                                      
TATCCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AP009048/2970579‑2970629
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctGATAAAGATCGAGGTAATCAGTCTGTAGGCGCTTGAGGCTGTCATGCAGCGCTTCGCGGATATTCTT  <  AP009048/2970640‑2970574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.