| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 3672611 | 67 (1.190) | 3 (0.060) | 3/92 | NT | 4.4% | coding (160/1485 nt) | gpp | guanosine pentaphosphatase/exopolyphosphatase |
| ? | AP009048 | = 3672620 | 71 (1.400) | coding (169/1485 nt) | gpp | guanosine pentaphosphatase/exopolyphosphatase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCATCCAGACGCTGACGCGAATAAAACGCAAAGTGCGTCTGGCTGCTGGCCTGAATAGCGAAAATGCCCTCTCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/3672537‑3672611‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccaTTGCTTCATTGGAGAGGGCATTTTCGCTATTCAGGCCAGCAGCCAGACGCACTTTGCGTTTTATTCGCGT < AP009048/3672620‑3672551 GCATCCAGACGCTGACGCGAATAAAACGCAAAGTGCGTCTGGCTGCTGGCCTGAATAGCGAAAATGCCCTC > 1:4786788/1‑71GCATCCAGACGCTGACGCGAATAAAACGCAAAGTGCGTCTGGCTGCTGGCCTGAATAGCGAAAATGCCCTC < 1:2278498/71‑1 CCAGACGCTGACGCGAATAAAACGCAAAGTGCGTCTGGCTGCTGGCCTGAATAGCGAAAATGCCCTCTCC > 1:647198/1‑70 ACGCGAATAAAACGCAAAGTGCGTCTGGCTGCTGGCCTGAATAGCGAAAATGCCCTCTCCATTGCTTCATT > 1:190742/1‑71 AAACGCAAAGTGCGTCTGGCTGCTGGCCTGAATAGCGAAAATGCCCTCTCCATTGCTTCATTGGAGAGG > 1:2139839/1‑69 AAGTGCGTCTGGCTGCTGGCCTGAATAGCGAAAATGCCCTCTCCATTGCTTCATTGGAGAGG > 1:2544777/1‑62 CTCCATTGCTTCATTGGAGAGGGCATTTTCGCTATTCAGGCCAGCAGC < 1:2590012/48‑1 CTCCATTGCTTCATTGGAGAGGGCATTTTCGCTATTCAGGCCAG < 1:1612025/44‑1 TCCATTGCTTCATTGGAGAGGGCATTTTCGCTATTCAGGCCAGCAGCCAGACGCACTTTGC < 1:2471376/61‑1 TCCATTGCTTCATTGGAGAGGGCATTTTCGCTATTCAGGCCAGCAGCCAGACGCACTTTGC < 1:2828660/61‑1 TCCATTGCTTCATTGGAGAGGGCATTTTCGCTATTCAGGCCAG > 1:2656434/1‑43 CCATTGCTTCATTGGAGAGGGCATTTTCGCTATTCAGGCCAGCAGCCA > 1:567218/1‑48 CATTGCTTCATTGGAGAGGGCATTTTCGCTATTCAGGCCAGCAGCCAGACGCACTTTGCGTTTTATTCGCG > 1:2751348/1‑71 CATTGCTTCATTGGAGAGGGCATTTTCGCTATTCAGGCCAGCAGCCAGACGCACTTTGCGTTTTATTCGCG > 1:3622559/1‑71 CATTGCTTCATTGGAGAGGGCATTTTCGCTATTCAGGCCAGCAGCCAGACGCACTTTGCGTTTTATTCGCG > 1:4210621/1‑71 CATTGCTTCATTGGAGAGGGCATTTTCGCTATTCAGGCCAGCAGCCAGACGCACTTTGCGTTTTATTCGCG > 1:1755459/1‑71 CATTGCTTCATTGGAGAGGGCATTTTCGCTATTCAGGCCAGCAGCCAGACGCACTTTGCGTTTTATTCGC < 1:3199573/70‑1 CATTGCTTCATTGGAGAGGGCATTTTCGCTATTCAGGCCAGCAGCCAGACGCACTTT < 1:865032/57‑1 CATTGCTTCATTGGAGAGGGCATTTTCGCTATTCAGGCCAGCAGCCAGACGCACTTT < 1:871001/57‑1 CATTGCTTCATTGGAGAGGGCATTTTCGCTATTCA < 1:3611025/35‑1 ATTGCTTCATTGGATAGGGCATTTTCGCTATTCAGGCCAGCAGCCAGACGCACTTTGCGTTTTATTCGCGT < 1:1620033/71‑1 ATTGCTTCATTGGAGAGGGCATTTTCGCTATTCAGGCCAGCAGCCAGACGCACTTTGCGTTTTATTCGCGT > 1:3906386/1‑71 ATTGCTTCATTGGAGAGGGCATTTTCGCTATTCAGGCCAGCAGCCAGACGCACTTTG < 1:74127/57‑1 GCATCCAGACGCTGACGCGAATAAAACGCAAAGTGCGTCTGGCTGCTGGCCTGAATAGCGAAAATGCCCTCTCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/3672537‑3672611‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccaTTGCTTCATTGGAGAGGGCATTTTCGCTATTCAGGCCAGCAGCCAGACGCACTTTGCGTTTTATTCGCGT < AP009048/3672620‑3672551 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |