| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 1632687 | 20 (0.360) | 3 (0.060) | 3/90 | NT | 12.6% | intergenic (‑60/+29) | ydfI/ydfJ | predicted mannonate dehydrogenase/predicted transporter |
| ? | AP009048 | = 1632703 | 24 (0.480) | intergenic (‑76/+13) | ydfI/ydfJ | predicted mannonate dehydrogenase/predicted transporter | |||||
TTATTTCCCATAACAATTCCTTAAATATAAATATGGCAAGCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGCTCTTACAA > AP009048/1632617‑1632750 | ttattTCCCATAACAATTCCTTAAATATAAATATGGCAAGCTATATGTTTTGTTATATGAATAAAAATCCC > 1:1793530‑M1/1‑71 (MQ=255) aaTTCCTTAAATATAAATATGGCAAGCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAagag < 1:4833409/71‑1 (MQ=255) ttCCTTAAATATAAATATGGCAAGCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAagag > 1:3411696/1‑69 (MQ=255) atataaatatGGCAAGCTATATGTTTTGTTATATGAATAAAAATCCCttctcttaccggagaggggatttt < 1:3358839‑M1/71‑25 (MQ=255) ataaatatGGCAAGCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAgg > 1:161071/1‑71 (MQ=255) aatatGGCAAGCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGtt < 1:3640486/71‑1 (MQ=255) aatatGGCAAGCTATATGTTTTGTTATATGAATAAAAATCCCCGCTCCGGTAagag > 1:4702687/1‑56 (MQ=255) atGGCAAGCTATATGTTTTGTTATATGAATAAAAATCCCttctcttaccggag > 1:4142911‑M1/1‑39 (MQ=255) tGGCAAGCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACa < 1:3506281/71‑1 (MQ=255) gCAAGCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTaa > 1:2485430/1‑60 (MQ=255) aGCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACtt < 1:3804054/71‑1 (MQ=255) aGCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACtt > 1:1651466/1‑71 (MQ=255) gCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACTTc < 1:2682817/71‑1 (MQ=255) atatGTTTTGTTATATGAATAAAAATCCCCTCTCCGGt < 1:945953/38‑1 (MQ=255) atatGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTa > 1:4770478/1‑60 (MQ=255) atGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACTTCTgg > 1:1664559/1‑69 (MQ=255) tGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAaga > 1:3909526/1‑39 (MQ=255) ttttGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAgg < 1:4425717/70‑1 (MQ=255) tttGTTTTATGAATAAAAATCCCCTCTCCGGTAAGAGAAgg < 1:1297131‑M2/41‑3 (MQ=255) tttGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGttt < 1:2159511/53‑1 (MQ=255) tGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTg < 1:5061678/70‑1 (MQ=255) ttATATGAATAAAAATCCCttctcttaccggagaggg < 1:2419611‑M1/37‑19 (MQ=255) aaTAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGttt < 1:1701645/42‑1 (MQ=255) aTAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGCTCTTa > 1:4745417/1‑71 (MQ=255) tAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAg > 1:3100408/1‑44 (MQ=255) aaaaTCCCCTCTCCGGTAAGAGAAgggatttttattcatataacaaaacatatagcttgccatatttatat < 1:3358839‑M2/71‑48 (MQ=255) tCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTgc < 1:4651637/54‑1 (MQ=255) ccttctcttaccggagaggggatttttattcataaaacaaa < 1:1297131‑M1/41‑40 (MQ=255) cccTCTCCGGTAAGAGAAgggatttttattcatataa < 1:2419611‑M2/37‑20 (MQ=255) | TTATTTCCCATAACAATTCCTTAAATATAAATATGGCAAGCTATATGTTTTGTTATATGAATAAAAATCCCCTCTCCGGTAAGAGAAGGGATTAAGGGTTTACAGACTTCTGGAAGGTTGCGCAGCTCTTACAA > AP009048/1632617‑1632750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |