| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 2507021 = | 49 (0.870) | 4 (0.080) | 3/90 | NT | 8.5% | coding (446/858 nt) | ypdC | predicted DNA‑binding protein |
| ? | AP009048 | 2507058 = | 43 (0.870) | coding (483/858 nt) | ypdC | predicted DNA‑binding protein | |||||
CCAGCCTGCAACGCGGTGAAGGTGAAGCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCGTGGTGAATATGCCGCCG > AP009048/2506952‑2507091 | ccAGCCTGCAACGCGGTGAAGGTGAAGCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAg > 1:1982972/1‑71 (MQ=255) atagagaaaatcgccgcgcggctgcgaattgcccggcggcatattcaccacgctacggcaaagatgcagc < 1:3219271‑M1/3‑1 (MQ=255) cTGCAACGCGGTGAAGGTGAAGCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCaaaa < 1:204990/71‑1 (MQ=255) tGCAACGCGGTGAAGGTGAAGCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCaaaa > 1:1678777/1‑70 (MQ=255) gCAACGCGGTGAAGGTGAAGCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAata > 1:4627792/1‑71 (MQ=255) aCGCGGTGAAGGTGAAGCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCa < 1:32737/71‑1 (MQ=255) cgcgGTGAAGGTGAAGCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCaaa < 1:946943/64‑1 (MQ=255) gtgaaggtgaagCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAg > 1:1887904/1‑71 (MQ=255) aaggtgaagCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCAt > 1:3904307/1‑64 (MQ=255) aaggtgaagCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCg < 1:759882/71‑1 (MQ=255) aaggtgaagCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCg < 1:5167514/71‑1 (MQ=255) aaggtgaagCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCg > 1:3209351/1‑71 (MQ=255) aaggtgaagCGATGCTTACCGCCCTCACCAATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGcc > 1:1379977/1‑70 (MQ=255) aggtgaagCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGc > 1:3645236/1‑71 (MQ=255) tgaagCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTgg < 1:367952/71‑1 (MQ=255) aagCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCAtt < 1:2320258/59‑1 (MQ=255) aagCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGgtg < 1:4138894/71‑1 (MQ=255) gCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGgtg < 1:3781596/69‑1 (MQ=255) gCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGtt < 1:3875221/71‑1 (MQ=255) gCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGtt < 1:2532964/71‑1 (MQ=255) cGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCaaa > 1:3783079/1‑48 (MQ=255) gATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTaa < 1:1485551/71‑1 (MQ=255) tGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAata > 1:4520843/1‑48 (MQ=255) tGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAata < 1:4579128/48‑1 (MQ=255) tGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAata < 1:2253983/48‑1 (MQ=255) tGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGt < 1:3352916/71‑1 (MQ=255) cccggcggcatattcaccacgctacggcaaagatgcag < 1:4483347‑M1/2‑1 (MQ=255) ggcggcatattcaccacgctacggcaaagatgcAGCAAAATATCATTCAGCCGCTGGTGTTAAGttt < 1:5137171‑M1/34‑1 (MQ=255) cccTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTaa < 1:3013346/60‑1 (MQ=255) cTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCt < 1:1056257/71‑1 (MQ=255) tCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATc < 1:2085499/38‑1 (MQ=255) tattcaccacgctacggcaaagatgcAGCAAAATATCATTCAGCCGCTGgtgt < 1:3061971‑M1/27‑1 (MQ=255) tattcaccacgctacggcaaagatgcAGCAAAATATCATTCAGCCGCTGgtgt < 1:4846909‑M1/27‑1 (MQ=255) cACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGt > 1:4878996/1‑58 (MQ=255) cATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCg > 1:457515/1‑71 (MQ=255) aTCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGt > 1:1113618/1‑53 (MQ=255) tCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTaa < 1:747884/50‑1 (MQ=255) ttAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGc > 1:1619620/1‑71 (MQ=255) ttAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGc > 1:3955794/1‑71 (MQ=255) aGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGc < 1:3177770/69‑1 (MQ=255) ccGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCg < 1:3700809/68‑1 (MQ=255) gTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCgtggtg < 1:1203949/71‑1 (MQ=255) ttCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCt < 1:2422515/54‑1 (MQ=255) ttCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCt < 1:4307475/54‑1 (MQ=255) ttCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCgtggtg > 1:4361498/1‑70 (MQ=255) ttCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCgt < 1:106313/66‑1 (MQ=255) ttCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCGTGGTGa < 1:3427732/71‑1 (MQ=255) cgccgcTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCgtg > 1:889230/1‑65 (MQ=255) gccgcTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCGTGGTGAat < 1:2261612/70‑1 (MQ=255) gccgcTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCGTGGTGAat < 1:2482796/70‑1 (MQ=255) aaagatgcAGCAAAATATCATTCAGCCGCTGGTGTTaa < 1:270685‑M1/30‑1 (MQ=255) ccgcTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCGTGGTGAatat < 1:4776564/71‑1 (MQ=255) ccgcTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCGTGGTGAatat < 1:3266324/71‑1 (MQ=255) ccgcTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCGTGGTGAatat < 1:2795879/71‑1 (MQ=255) cgcTGGAGCAAAATATCATTCAGCTGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCgtggt < 1:5125610/64‑1 (MQ=255) cgcTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCGTGGTGAATATg < 1:527423/71‑1 (MQ=255) gcTGGAGCAAAATTTCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCGTGGTGAatat < 1:457005/69‑1 (MQ=255) gcTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCGTGGTGa < 1:518647/65‑1 (MQ=255) cTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGcc < 1:3813489/52‑1 (MQ=255) ggAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCGTGGTGa < 1:3565061/62‑1 (MQ=255) gAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGGCGTAGCg < 1:3807140/55‑1 (MQ=255) AGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCGTGGTGAATATGccgccg < 1:1280984‑M1/71‑1 (MQ=255) | CCAGCCTGCAACGCGGTGAAGGTGAAGCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCGTGGTGAATATGCCGCCG > AP009048/2506952‑2507091 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |