| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 3711929 | 79 (1.400) | 4 (0.080) | 3/94 | NT | 5.4% | coding (882/1890 nt) | gidA | glucose‑inhibited cell‑division protein |
| ? | AP009048 | = 3711950 | 68 (1.310) | coding (903/1890 nt) | gidA | glucose‑inhibited cell‑division protein | |||||
Only 100 of 116 total aligned reads displayed.
GTGTCGGCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGTATCTCCACCAGCCTGCCGT > AP009048/3711859‑3711999 | gtgtCGGCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAG < 1:3436019‑M1/71‑1 (MQ=255) cGGCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATc > 1:2487812/1‑70 (MQ=255) ggCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCtt > 1:4783654/1‑71 (MQ=255) ggCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCt < 1:3748396/70‑1 (MQ=255) gCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGa < 1:627281/66‑1 (MQ=255) gCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTc < 1:3106523/71‑1 (MQ=255) cccACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTcc < 1:3803814/71‑1 (MQ=255) aCGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCtt > 1:2290299/1‑70 (MQ=255) cGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTc > 1:3606060/1‑66 (MQ=255) cGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTc > 1:11820/1‑66 (MQ=255) cGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGa < 1:1951407/71‑1 (MQ=255) gCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGaa > 1:2144259/1‑71 (MQ=255) cTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCtt < 1:2446670/67‑1 (MQ=255) cTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCgg < 1:220162/71‑1 (MQ=255) cTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCg > 1:1127876/1‑70 (MQ=255) cTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCg > 1:1809266/1‑70 (MQ=255) cTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCg > 1:1815265/1‑70 (MQ=255) tGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCgg > 1:1998515/1‑70 (MQ=255) cccGTCGATCGAAGACAAAGTCATGCGCTTCTCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg < 1:4949361/71‑1 (MQ=255) cccGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg > 1:4222554/1‑71 (MQ=255) cccGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg > 1:1439741/1‑71 (MQ=255) ccGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGa < 1:1016885/68‑1 (MQ=255) cGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCg > 1:4679881/1‑65 (MQ=255) gTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg < 1:3555901/68‑1 (MQ=255) gTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGAc < 1:387759‑M2/71‑2 (MQ=255) gTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAG < 1:264071‑M1/49‑1 (MQ=255) tcgatcgaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCg < 1:1523118/63‑1 (MQ=255) tcgatcgaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGAct > 1:3808980‑M2/1‑69 (MQ=255) tcgatcgaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGAct < 1:4904642‑M2/71‑3 (MQ=255) tcgatcgaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGAct > 1:2333974‑M2/1‑69 (MQ=255) tcgatcgaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAG < 1:4027217‑M1/48‑1 (MQ=255) gatcgaAGACAAAGTCATGCGCTTCGCCGACAGCAATCAGCATCAGATCTTCCTTGAACCGGAAGGActga < 1:2826628‑M2/71‑5 (MQ=255) gatcgaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGtccttccggttcaaggaagatctg < 1:2565996‑M1/70‑25 (MQ=255) gatcgaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGa > 1:54422/1‑63 (MQ=255) atcgaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGtccttccggttcaaggaagatctg < 1:2881777‑M1/69‑25 (MQ=255) tcgaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGtccttccggttcaaggaaga < 1:723573‑M1/64‑21 (MQ=255) tcgaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTc < 1:312023/50‑1 (MQ=255) tcgaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg < 1:2399085/63‑1 (MQ=255) aaGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACctct < 1:2923534/71‑1 (MQ=255) aGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGa > 1:4090636/1‑61 (MQ=255) aGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACctct > 1:2543157/1‑70 (MQ=255) aGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACctct > 1:561793/1‑70 (MQ=255) aGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACctc > 1:1812012/1‑69 (MQ=255) gACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGa < 1:2604800/60‑1 (MQ=255) aCAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTc > 1:366919/1‑44 (MQ=255) cAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTTCTTGAACCGGAAGGACTGACCTCTAATg < 1:146380/71‑1 (MQ=255) cAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAAc > 1:4166124/1‑50 (MQ=255) cAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAAt > 1:4856836/1‑70 (MQ=255) aaaGTCATGCGCTTCGCCGACAGAAATCAGCATCAGatcttccggttcaaggaagatc > 1:4388604‑M1/1‑36 (MQ=255) aaaGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTc > 1:2718084/1‑42 (MQ=255) aaaGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg < 1:2948471/55‑1 (MQ=255) aaaGTCATGCGCTTAGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg < 1:1690187/55‑1 (MQ=255) aaaGTCATGCGCTTAGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGAc > 1:3648952‑M2/1‑57 (MQ=255) aGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGaaa > 1:914524/1‑71 (MQ=255) tCATGCGCTTCGCCGACAGAAATGAGCATCAGATCTTCCTTg < 1:236676/42‑1 (MQ=255) tCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATg < 1:3368714/66‑1 (MQ=255) aTGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCtt < 1:4261496/39‑1 (MQ=255) aTGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTg < 1:4363230/40‑1 (MQ=255) tGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTa > 1:1911303/1‑70 (MQ=255) tGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTa > 1:2188195/1‑70 (MQ=255) tGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTAt < 1:4635653/71‑1 (MQ=255) cgcTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCg > 1:5146092/1‑42 (MQ=255) cgcTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCg > 1:2559242/1‑42 (MQ=255) cgcTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATcc > 1:1084285/1‑71 (MQ=255) cTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCg > 1:2143607/1‑70 (MQ=255) cTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGa < 1:3561530/71‑1 (MQ=255) ttCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg < 1:2051467/43‑1 (MQ=255) ttCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTa < 1:3437344/65‑1 (MQ=255) ttCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGaa > 1:3684678/1‑71 (MQ=255) tCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAAc > 1:758135/1‑71 (MQ=255) cGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACg > 1:3534184/1‑71 (MQ=255) gCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGa > 1:910601/1‑42 (MQ=255) gCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGa > 1:4508371/1‑42 (MQ=255) ccGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACgg > 1:1543502/1‑70 (MQ=255) ccGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACgg > 1:2780019/1‑70 (MQ=255) ccGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGt < 1:762936/71‑1 (MQ=255) cGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCg < 1:883647/64‑1 (MQ=255) cGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGTa < 1:3274203/71‑1 (MQ=255) aCAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGTAtc > 1:5101983/1‑71 (MQ=255) aGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGActga < 1:1753706‑M2/40‑5 (MQ=255) aGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATcc > 1:3966782/1‑59 (MQ=255) aGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGTAtctc < 1:1723512/71‑1 (MQ=255) gAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGTAtctc < 1:3994751/70‑1 (MQ=255) aTCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGa < 1:817591/46‑1 (MQ=255) cAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTATAATGAAATTTATCCGAAc > 1:1655436/1‑57 (MQ=255) gCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGTATCTCCACCAGcc < 1:2252578/71‑1 (MQ=255) tCAGtccttccggttcaaggaagatctgatgctgatttct < 1:1753706‑M1/40‑37 (MQ=255) tCAGtccttccggttcaaggaagatctgatgctgattgctgtcggcgaagcgcatgactttgtcttcgatc < 1:2826628‑M1/71‑68 (MQ=255) cAGATCTTCCTTGAACCTGAAGGACTGACCTCTAATGAAATTTATCCGAACGGTATCTCCACCAGCCTGcc > 1:2985305/1‑71 (MQ=255) cAGATCTTCCTTGAACCGGAAGGActgatgctgatttctgtcggcgaagcgcatgactttgtcttcgatc < 1:2565996‑M2/70‑47 (MQ=255) cAGATCTTCCTTGAACCGGAAGGActgatgctgatttctgtcggcgaagcgcatgactttgtcttcgat < 1:2881777‑M2/69‑46 (MQ=255) aGtccttccggttcaaggaagatctgatgctgatttctgtcggcgaagcgcatgactttgtcttcgatcga < 1:4904642‑M1/71‑70 (MQ=255) aGtccttccggttcaaggaagatctgatgctgatttctgtcggcgaagcgcatgactttgtcttcgatcga > 1:2333974‑M1/1‑2 (MQ=255) aGtccttccggttcaaggaagatctgatgctgatttctgtcggcgaagcgcatgactttgtcttcgatcga > 1:3808980‑M1/1‑2 (MQ=255) aGtccttccggttcaaggaagatctgatgctgatttctgtcggcgaagcgcatgactttgtcttcgatcg < 1:4644195‑M1/70‑69 (MQ=255) aGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATc > 1:4536540/1‑45 (MQ=255) gtccttccggttcaaggaagatctgatgctgatttctgtcggctaagcgcatgacttt > 1:3648952‑M1/1‑1 (MQ=255) gtccttccggttcaaggaagatctgatgctgatttctgtcggcgaagcgcatgactttgtcttcgatcgac < 1:387759‑M1/71‑71 (MQ=255) gATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGTATCTCCACCAGCCTGCCGt < 1:2981616/71‑1 (MQ=255) gATCTTCCTTGAACCGGAAGATctgatgctgatttctgtcggcgaagcgcatgacttt > 1:4388604‑M2/1‑22 (MQ=255) | GTGTCGGCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGTATCTCCACCAGCCTGCCGT > AP009048/3711859‑3711999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |