| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 952526 = | 66 (1.170) | 4 (0.090) | 4/82 | NT | 7.3% | coding (1451/2283 nt) | pflB | pyruvate formate lyase I |
| ? | AP009048 | 952557 = | 48 (1.060) | coding (1420/2283 nt) | pflB | pyruvate formate lyase I | |||||
TTCAGTGCAGTGATGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTCGTCAACG > AP009048/952490‑952627 | ttCAGTGCAGTGATGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTtcatca > 1:3949342/1‑69 (MQ=255)ttCAGTGCAGTGATGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATa < 1:4988085/71‑1 (MQ=255) agtgcagtgATGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGtt > 1:1646740/1‑71 (MQ=255) agtgcagtgATGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGtt < 1:3828670/71‑1 (MQ=255) agtgcagtgATGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGt < 1:3144145/70‑1 (MQ=255) agtgcagtgATGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGt < 1:745847/70‑1 (MQ=255) gtgcagtgATGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTc < 1:2586517/71‑1 (MQ=255) tgcagtgATGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGtt > 1:2466373/1‑69 (MQ=255) tgcagtgATGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCa < 1:5102404/71‑1 (MQ=255) cagtgATGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAg > 1:3685628/1‑70 (MQ=255) agtgATGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGa > 1:1887729/1‑71 (MQ=255) gtgATGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGa > 1:4779020/1‑70 (MQ=255) gtgATGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGAc < 1:3256539/71‑1 (MQ=255) tgATGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTcatcat < 1:2290189/60‑1 (MQ=255) tgATGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACa > 1:2506747/1‑71 (MQ=255) tgATGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACa > 1:1998734/1‑71 (MQ=255) aTGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCa > 1:1579842/1‑64 (MQ=255) aTGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCa > 1:491421/1‑64 (MQ=255) aTGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATc < 1:4645036/71‑1 (MQ=255) cTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCt < 1:4926065/70‑1 (MQ=255) cTGTTTAGCCAGCCAGTCCATGAAGTGATACATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCtt > 1:2053505/1‑71 (MQ=255) ttAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTc < 1:2018140/54‑1 (MQ=255) ttAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGAt > 1:4201651/1‑71 (MQ=255) tAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCg > 1:4462877/1‑62 (MQ=255) agccagccAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCg > 1:2774614/1‑71 (MQ=255) cagccagTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGtt < 1:4398844/71‑1 (MQ=255) cagacagTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAg < 1:3702767/51‑1 (MQ=255) agccagTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGtt > 1:3374381/1‑70 (MQ=255) gccagTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGa > 1:1459747/1‑51 (MQ=255) gccagTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGtt > 1:2232441/1‑69 (MQ=255) gccagTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGtt > 1:3848419/1‑69 (MQ=255) agTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGa > 1:1900964/1‑70 (MQ=255) agTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGAc > 1:2693395/1‑71 (MQ=255) ccATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCg < 1:4155497/60‑1 (MQ=255) cATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCg < 1:4563906/71‑1 (MQ=255) cATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCg > 1:3455335/1‑71 (MQ=255) cATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCg < 1:5069760/71‑1 (MQ=255) cATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCg < 1:3205973/71‑1 (MQ=255) cATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCg < 1:1337582/71‑1 (MQ=255) cATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCg < 1:3271645/71‑1 (MQ=255) ATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCgg > 1:4476823‑M1/1‑59 (MQ=255) ATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCg < 1:1514335‑M1/70‑1 (MQ=255) TGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGa > 1:1458351‑M1/1‑71 (MQ=255) gaagtgatggagcgcatggatcacttcatCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCg < 1:2260106‑M2/39‑1 (MQ=255) gaagtgatggagcgcatggatcacttcatCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGAc > 1:2059175‑M2/30‑71 (MQ=255) GAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACtt > 1:3141673‑M1/1‑66 (MQ=255) GAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGAc < 1:2945160‑M1/71‑1 (MQ=255) GAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGAc < 1:4560939‑M1/71‑1 (MQ=255) AAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGa < 1:3225377‑M1/62‑1 (MQ=255) AGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGt > 1:139655‑M1/1‑56 (MQ=255) AGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGa < 1:684125‑M1/68‑1 (MQ=255) AGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCa > 1:3707190‑M1/1‑71 (MQ=255) TGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACa > 1:1384552‑M1/1‑39 (MQ=255) TGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCg > 1:3961256‑M1/1‑64 (MQ=255) TGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAAc > 1:5127151‑M1/1‑71 (MQ=255) ATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCt > 1:1066778‑M1/1‑71 (MQ=255) ATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCt < 1:342715‑M1/71‑1 (MQ=255) ccATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGtt < 1:1214783/51‑1 (MQ=255) ccATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGAcc < 1:725435/64‑1 (MQ=255) gagcgcatggatcacttcatCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCa < 1:2336535‑M2/51‑1 (MQ=255) agcgcatggatcacttcatCATAGTTCAGGACATCGCCttt > 1:3383845‑M2/20‑41 (MQ=255) aTGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCa < 1:5115118/63‑1 (MQ=255) tGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGa < 1:3323973/52‑1 (MQ=255) cgcTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGAt > 1:1726093/1‑41 (MQ=255) cgcTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGAt > 1:1732468/1‑41 (MQ=255) cgcTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCgg > 1:4236315/1‑56 (MQ=255) cgcTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCAtttt < 1:5160236/71‑1 (MQ=255) cgcTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCAtttt < 1:4333640/71‑1 (MQ=255) cgcTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCAtttt < 1:4315797/71‑1 (MQ=255) cgcTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCAttt < 1:1078273/70‑1 (MQ=255) gcTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGtt > 1:2739283/1‑45 (MQ=255) cATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCAtttt > 1:2494745/1‑66 (MQ=255) cATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGtt < 1:3829859/71‑1 (MQ=255) cATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGtt > 1:1341318/1‑71 (MQ=255) atcacttcatCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTg < 1:2686649‑M2/49‑1 (MQ=255) atcacttcatCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGt > 1:548153‑M2/11‑69 (MQ=255) tcacttcatCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTc > 1:3396069‑M2/10‑47 (MQ=255) tcacttcatCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCgg < 1:959301‑M2/40‑1 (MQ=255) tcacttcatCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGtttt < 1:3187173‑M2/62‑1 (MQ=255) cacttcatCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCt < 1:4970485‑M2/48‑1 (MQ=255) acttcatCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTc > 1:1488615‑M2/8‑71 (MQ=255) cttcatCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTc < 1:4514370‑M2/38‑1 (MQ=255) cttcatCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCg < 1:1423563‑M2/39‑1 (MQ=255) tcatCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTc > 1:705571‑M2/5‑68 (MQ=255) atCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTCGTCaa > 1:1290991‑M2/3‑71 (MQ=255) atCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTCGTCaa > 1:599586‑M2/3‑71 (MQ=255) atCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTCGTCa < 1:3147219‑M2/68‑1 (MQ=255) atCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTCGTCa < 1:178239‑M2/68‑1 (MQ=255) atCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTCGTCa < 1:2878793‑M2/68‑1 (MQ=255) catAGTTCAGGACATCGCCTTTGATCGGTTCAGACt < 1:3476746/36‑1 (MQ=255) catAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTCGTCAAcg > 1:15540/1‑71 (MQ=255) | TTCAGTGCAGTGATGTACTGTTTAGCCAGCCAGTCCATGAAGTGATCCATGCGCTCCATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTCGTCAACG > AP009048/952490‑952627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |