| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 1941618 | 41 (0.730) | 4 (0.080) | 3/90 | NT | 7.8% | coding (290/972 nt) | lpxM | myristoyl‑acyl carrier protein (ACP)‑dependent acyltransferase |
| ? | AP009048 | = 1941633 | 59 (1.190) | coding (275/972 nt) | lpxM | myristoyl‑acyl carrier protein (ACP)‑dependent acyltransferase | |||||
CGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGAT > AP009048/1941565‑1941702 | cgcgcgGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGtg < 1:4674017‑M2/71‑3 (MQ=255)cgcgcgGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGtg < 1:2679360‑M2/71‑3 (MQ=255) gcgcgGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGtgg < 1:4158217‑M2/71‑4 (MQ=255) gcgGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGtggc < 1:2318256‑M2/70‑5 (MQ=255) cgGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGtggcaa > 1:4308734‑M2/1‑65 (MQ=255) ggCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGtggcaa > 1:213374‑M2/1‑64 (MQ=255) aTTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACAtctc < 1:449502/71‑1 (MQ=255) aTTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACAtct < 1:2903220/70‑1 (MQ=255) ttttCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCtca > 1:2042775/1‑71 (MQ=255) tttCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCtcat > 1:3705608/1‑71 (MQ=255) tttCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCtcat > 1:2060946/1‑71 (MQ=255) tctcCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCtcatc > 1:3942221/1‑70 (MQ=255) cGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATcaaca > 1:822679/1‑70 (MQ=255) cGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATcaaca < 1:3076368/70‑1 (MQ=255) cGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATcaaca > 1:237231/1‑70 (MQ=255) ggCCCGCGTATTGCCAACTCAGCCATCATTGCCATCTCTTGCGGCGCGGTGGCAAACATCTCATCAACAAt > 1:616695/1‑71 (MQ=255) gCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATc < 1:4548496/71‑1 (MQ=255) gCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATc < 1:739571/71‑1 (MQ=255) ccGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGc < 1:3122334/71‑1 (MQ=255) cgTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTc < 1:2766319/71‑1 (MQ=255) gTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTcg > 1:2250873/1‑71 (MQ=255) ttGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTcgcg < 1:2228996/70‑1 (MQ=255) ttGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTcgcg < 1:748780/70‑1 (MQ=255) tGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGtt > 1:3737202/1‑71 (MQ=255) ccAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTc < 1:4797608/70‑1 (MQ=255) ccAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTc < 1:4569460/70‑1 (MQ=255) aaCTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGc > 1:465543/1‑71 (MQ=255) cTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCtt < 1:4997639/71‑1 (MQ=255) tCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAAt > 1:786088/1‑53 (MQ=255) aGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCAc > 1:339505/1‑71 (MQ=255) aGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCAc > 1:654023/1‑71 (MQ=255) gCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACt < 1:1491760/71‑1 (MQ=255) ccATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGtt > 1:1731508/1‑60 (MQ=255) ccATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCa < 1:1482536/68‑1 (MQ=255) ccATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTa > 1:3610811/1‑71 (MQ=255) ccATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTa > 1:970828/1‑71 (MQ=255) atcatTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACg > 1:1730543/1‑71 (MQ=255) tcatTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCt < 1:724038/62‑1 (MQ=255) tcatTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGt < 1:2706531/71‑1 (MQ=255) tcatTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGt > 1:481017/1‑71 (MQ=255) atTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTc > 1:3979476/1‑71 (MQ=255) tGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCt > 1:2287436/1‑70 (MQ=255) gCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTg > 1:3219207/1‑70 (MQ=255) gCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTg > 1:2361583/1‑70 (MQ=255) ccATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACt < 1:733476/61‑1 (MQ=255) ccATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACt < 1:2313717/61‑1 (MQ=255) cATCGCTTGCGGCGCGGtggcaatgatggctgagttggcaatacgcgggccggagaaaatt < 1:3060101‑M2/61‑45 (MQ=255) cATCGCTTGCGGCGCGGtggcaatgatggctgagttggcaatacgcgggccggagaaaatt < 1:4454105‑M2/61‑45 (MQ=255) cATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGc < 1:2408427/42‑1 (MQ=255) cATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGaa < 1:2890564/71‑1 (MQ=255) cATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGaa < 1:2680815/71‑1 (MQ=255) aTCGCTTGCGGCGCGGtggcaatgatggctgagttggc > 1:3781639‑M2/1‑16 (MQ=255) aTCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCa > 1:1013207/1‑57 (MQ=255) aTCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGa > 1:5117595/1‑69 (MQ=255) tCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAg < 1:4799747/71‑1 (MQ=255) tCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAg < 1:1222116/71‑1 (MQ=255) cGCTTGCGGCGCGGtggcaatgatggctgagttggcaa < 1:3599900‑M2/38‑25 (MQ=255) gCTTGCGGCGCGGTGGCAAACATCTCATCAACAAt > 1:1723353/1‑35 (MQ=255) gCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCa > 1:3439339/1‑48 (MQ=255) gCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCa > 1:3395653/1‑48 (MQ=255) gCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAg > 1:2815603/1‑69 (MQ=255) gCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAg > 1:2910348/1‑69 (MQ=255) gCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAg > 1:68264/1‑69 (MQ=255) gCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGc < 1:4019668/70‑1 (MQ=255) cTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCag < 1:2326970/71‑1 (MQ=255) tGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTg > 1:4265073/1‑61 (MQ=255) gcggcgCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCaga < 1:4401876/69‑1 (MQ=255) gcggcgCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCaga < 1:1934528/69‑1 (MQ=255) gcggcgCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCaga < 1:3647982/69‑1 (MQ=255) cgcgGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGa > 1:1932064/1‑69 (MQ=255) cgcgGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACa < 1:1393317/71‑1 (MQ=255) cgcgGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACa < 1:2239180/71‑1 (MQ=255) cgGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTc < 1:4589734/43‑1 (MQ=255) cgGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAga < 1:3855578/71‑1 (MQ=255) ggTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAgat > 1:3264829/1‑71 (MQ=255) | CGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGAT > AP009048/1941565‑1941702 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |