| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 2738692 | 54 (0.760) | 7 (0.110) | 3/90 | NT | 13.4% | intergenic (+466/‑63) | tufA/rpsJ | protein chain elongation factor EF‑Tu/30S ribosomal subunit protein S10 |
| ? | Exported | = 2738700 | 42 (0.660) | intergenic (+474/‑55) | tufA/rpsJ | protein chain elongation factor EF‑Tu/30S ribosomal subunit protein S10 | |||||
CTCAGTTAGCCGAATTTGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2738618‑2738692‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccatTACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAA < Exported/2738700‑2738633 CTCAGTTAGCCGAATTTGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTC < 1:511155/71‑1 CAGTTAGCCGAATTTGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCC > 1:1149967/1‑70 GAATTTGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATTACGATT < 1:3524075/71‑1 GAATTTGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCA > 1:2188227/1‑63 TAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATTACGATTGATGGG < 1:1849131/64‑1 TAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATTACGATTGATGGG < 1:2305302/64‑1 TAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATTACGATTGATGGG < 1:2701819/64‑1 TAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATTACGATTGATGGG < 1:4437752/64‑1 ACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATTACGATTGATGGGAG > 1:1691414/1‑64 ACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCATTACGATTGATGGGAG > 1:3026284/1‑64 CTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTC < 1:3169444/39‑1 ATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCA > 1:4282297/1‑36 CATTACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAA < 1:1917391/71‑1 CATTACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTA < 1:4184918/62‑1 TTACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCT < 1:770124/39‑1 TTACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCT < 1:2412057/39‑1 TTACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCT < 1:1411332/39‑1 CTCAGTTAGCCGAATTTGGCTACCTAACAATGCTCCCAATCGGGGAGCTACGTAAGAACGGTTACACTCTCCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2738618‑2738692‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccatTACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAA < Exported/2738700‑2738633 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |