| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 95427 = | 92 (1.300) | 10 (0.160) | 3/90 | NT | 11.1% | coding (2409/2706 nt) | secA | preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon |
| ? | Exported | 95453 = | 77 (1.210) | coding (2435/2706 nt) | secA | preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon | |||||
TCAGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/95497‑95427‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtttgCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAGGTACGTATGCC > Exported/95453‑95519 TCAGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG > 1:2557762/1‑71TCAGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG > 1:981519/1‑71TCAGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG > 1:3182069/1‑71TCAGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG > 1:1191468/1‑71 AGCGTACTTATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG < 1:2528782/69‑1 AGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG < 1:1228884/69‑1 AGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG < 1:4253401/69‑1 AGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG < 1:264066/69‑1 AGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG < 1:1977808/69‑1 AGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG < 1:1852096/69‑1 CTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG < 1:1539050/56‑1 CAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGT > 1:3646753/1‑43 CAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGT > 1:1327666/1‑43 CAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGT > 1:3242651/1‑43 CCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG < 1:203494/38‑1 CCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG < 1:861667/38‑1 CCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG < 1:1718461/38‑1 CAAACATGGAGAACGATTCACGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCT > 1:1150108/1‑69 CAAACATGGAGAACGATTCACGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCT > 1:4344409/1‑69 CAAACATGGAGAACGATTCACGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCT > 1:976186/1‑69 AAACATGGAGAACGATTCACGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAG > 1:3680017/1‑71 AAACATGGAGAACGATTCACGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAG > 1:3694419/1‑71 AAACATGGAGAACGATTCACGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAG > 1:1463283/1‑71 AAACATGGAGAACGATTCACGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCT > 1:321505/1‑68 AAACATGGAGAACGATTCACGTTTGCAGCGATGCTGGAGTCGTTGAAA > 1:4086542/1‑48 AAACATGGAGAACGATTCACGTTTGCAGCGATGCTGGAGTCGTTGAAA > 1:881212/1‑48 ATGGAGAACGATTCACGTTTGCAGCGATGCTGGAGTCGTT > 1:217809/1‑40 TTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAGGTACGTATGCC > 1:1496622/1‑71 TGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAG > 1:1252323/1‑39 TCAGCGTACTGATAACTTCATATTTCAACGACTCCAGCATCGCTGCAAACATGGAGAACGATTCACGTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/95497‑95427‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtttgCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAGGTACGTATGCC > Exported/95453‑95519 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |