| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1826756 | 55 (0.780) | 18 (0.260) | 10/98 | NT | 22.2% | intergenic (‑433/‑2) | hydN/mutS | formate dehydrogenase‑H, [4Fe‑4S] ferredoxin subunit/methyl‑directed mismatch repair protein |
| ? | Exported | 2705183 = | 72 (1.040) | coding (1/837 nt) | dam | DNA adenine methylase | |||||
CGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCC > Exported/1826686‑1826824 | cgcCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCC < 1:1067002‑M1/71‑1 (MQ=255)cgcCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCC < 1:541502‑M1/71‑1 (MQ=255) tATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCAt > 1:2942566/1‑69 (MQ=255) aTGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCAt > 1:3684944/1‑68 (MQ=255) aTGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATg < 1:3374537/69‑1 (MQ=255) tgATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGc < 1:3452205/71‑1 (MQ=255) aTTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAg > 1:2143039/1‑66 (MQ=255) aTTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCaa < 1:3606552/71‑1 (MQ=255) aCAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACTGGACATAACCCCATGAGTGCaa < 1:1655035/68‑1 (MQ=255) aCAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACTGGACATAACCCCATGAGTGCaa < 1:1660161/68‑1 (MQ=255) aCAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCaa > 1:2055167/1‑68 (MQ=255) aCAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCaa > 1:2796847/1‑68 (MQ=255) aCAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCaa < 1:3615200/68‑1 (MQ=255) cAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCaa < 1:3197353/67‑1 (MQ=255) gAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCa < 1:3501629/62‑1 (MQ=255) gAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCa < 1:1663378/62‑1 (MQ=255) aaaaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAAtt < 1:629496/71‑1 (MQ=255) aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc < 1:1214309/71‑1 (MQ=255) aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc < 1:1287793/71‑1 (MQ=255) aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc < 1:3491459/71‑1 (MQ=255) aTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCg < 1:4114011/71‑1 (MQ=255) tAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGaa < 1:1567152/63‑1 (MQ=255) tAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGa > 1:1345026/1‑71 (MQ=255) aaaaCCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacg > 1:796259/1‑71 (MQ=255) aaaaCCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacg < 1:2704351/71‑1 (MQ=255) aaCCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgc > 1:1185847/1‑70 (MQ=255) aCCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgcc > 1:416315/1‑70 (MQ=255) cATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGaa < 1:2990908/56‑1 (MQ=255) cATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgccca < 1:3479406/70‑1 (MQ=255) tCACACCCCATTTAATATCAGGGAACCGGACATAACCC < 1:2395566‑M1/38‑1 (MQ=255) tCACACCCCATTTAATATCAGGGAACCGGACATAACCC < 1:249151‑M1/38‑1 (MQ=255) tCACACCCCATTTAATATCAGGGAACCGGACATAACCC < 1:1220617‑M1/38‑1 (MQ=255) acacCCCATTTAATATCAGGGAAACGGACATAACCCCATGAGTGCAATAGaa > 1:2693011/1‑52 (MQ=255) taattTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaag > 1:1442103‑M1/3‑31 (MQ=255) taattTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgctttt < 1:2518779‑M1/50‑22 (MQ=255) cATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatga > 1:588066/1‑71 (MQ=255) cATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatga > 1:1407137/1‑71 (MQ=255) aTTTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaag > 1:646539‑M1/1‑29 (MQ=255) aTTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatgat > 1:3719914/1‑71 (MQ=255) tttAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtggg < 1:1083581‑M1/59‑32 (MQ=255) ttAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagta > 1:968414‑M1/1‑27 (MQ=255) ttAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGa > 1:675173/1‑51 (MQ=255) tAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgccca > 1:2866164/1‑56 (MQ=255) tAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatgatg > 1:2517073/1‑69 (MQ=255) tAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatgatg > 1:534663/1‑69 (MQ=255) aaTATCAGGGAACCGGACATAACCCCATGAGTGCaa > 1:1784008/1‑36 (MQ=255) atatCAGGGCACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATgca < 1:2634792/69‑1 (MQ=255) tCAGGGAACCGGCCATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGcagcag < 1:4164600/70‑1 (MQ=255) tCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc < 1:329972/43‑1 (MQ=255) tCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc < 1:3558507/43‑1 (MQ=255) tCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatga > 1:2720519/1‑62 (MQ=255) aGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc < 1:763525/41‑1 (MQ=255) aGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc < 1:216454/41‑1 (MQ=255) aGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTa > 1:3780696/1‑70 (MQ=255) aGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAt > 1:1059520/1‑71 (MQ=255) gggAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATgcagc < 1:2586920/65‑1 (MQ=255) taaaccGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgctt > 1:3265730‑M1/3‑17 (MQ=255) taaaccGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgctt > 1:4216409‑M1/3‑17 (MQ=255) taaaccGGACATAACCCatgaagaaaaatcgcgcttttttga < 1:1771170‑M1/40‑26 (MQ=255) ggAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGa > 1:506071/1‑41 (MQ=255) ggAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGa > 1:1788379/1‑41 (MQ=255) ggAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct < 1:2471574/71‑1 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATATAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct > 1:2905408/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtc > 1:627229/1‑69 (MQ=255) aaCCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccct > 1:1501939‑M1/1‑15 (MQ=255) aaCCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccct > 1:3318412‑M1/1‑15 (MQ=255) aaCCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccc > 1:1075698‑M1/1‑15 (MQ=255) aaCCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct > 1:3752170/1‑69 (MQ=255) aCCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgat < 1:107572‑M1/71‑58 (MQ=255) aCCGGACATAACCCatgaagaaaaatcgcgcttttttgaa < 1:4048494‑M1/40‑27 (MQ=255) aCCGGACATAACCCatgaagaaaaatcgcgcttttttgaa < 1:410025‑M1/40‑27 (MQ=255) ggACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGc > 1:1309027/1‑70 (MQ=255) ggACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCt > 1:230044/1‑71 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttga > 1:1529069‑M1/1‑10 (MQ=255) cATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGa > 1:371759/1‑70 (MQ=255) cATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGa < 1:358554/70‑1 (MQ=255) aTAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgatgatatt > 1:2379981‑M1/1‑7 (MQ=255) aTAACCCatgaagaaaaatcgcgcttttttgaagtgg < 1:627618‑M1/37‑31 (MQ=255) aTAACCCatgaagaaaaatcgcgcttttttgaagagggcagggggcaagtatcccctgcttgatgatatta < 1:4397362‑M1/71‑65 (MQ=255) aTAACCCCATGAGTGCAATAGAAAATTTCGacgcccatacgcccat < 1:1048264/46‑1 (MQ=255) aTAACCCCATGAGTGCAATAGAAAATTTCGacgcccatacgcccat < 1:267743/46‑1 (MQ=255) aaCCCatgaagaaaaatcgcgcttttttgaagtggg > 1:3871435‑M1/1‑5 (MQ=255) aaCCCatgaagaaaaatcgcgcttttttgaagtggg > 1:1936543‑M1/1‑5 (MQ=255) aaCCCCATGAGTGCAATAGAAAATTTCGacgcccatacg > 1:2165438/1‑39 (MQ=255) aaCCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTa > 1:334597/1‑56 (MQ=255) aaCCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAg > 1:2570634/1‑70 (MQ=255) aaCCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGc > 1:2282220/1‑71 (MQ=255) aaCCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGc > 1:3399845/1‑71 (MQ=255) aaCCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGc > 1:1155067/1‑71 (MQ=255) cccatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgatgatattaaacg < 1:3227122‑M1/71‑69 (MQ=255) | CGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCC > Exported/1826686‑1826824 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |