| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 7063 | 59 (0.840) | 30 (0.460) +GATT |
9/92 | NT | 49.0% | coding (897/1431 nt) | yaaJ | predicted transporter |
| ? | Exported | = 1611756 | 9 (0.130) | coding (1397/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase | |||||
Only 100 of 120 total aligned reads displayed.
CCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGA > Exported/6995‑7131 | cccGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCtt < 1:4014823/71‑2 (MQ=255) ccAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGAc > 1:301924/1‑70 (MQ=255) ccAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACa < 1:1149588/71‑1 (MQ=255) gTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATc < 1:1927253/71‑1 (MQ=255) atCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTg > 1:925109/1‑71 (MQ=255) atCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTg > 1:4093116/1‑71 (MQ=255) ggCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCg > 1:3338805/1‑71 (MQ=255) ggCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCg > 1:430009/1‑71 (MQ=255) gcgcTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCg > 1:3378808/1‑70 (MQ=255) gCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTgcg > 1:3830590/1‑58 (MQ=255) gCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTg > 1:1542614/1‑56 (MQ=255) gCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCg < 1:23199/70‑1 (MQ=255) ccGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCgg < 1:159156/70‑1 (MQ=255) aCAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGc > 1:1735449/1‑70 (MQ=255) cAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTgcgc > 1:217739/1‑53 (MQ=255) aGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAg < 1:1821664/71‑1 (MQ=255) aGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAg < 1:179102/71‑1 (MQ=255) aGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAg < 1:957984/71‑1 (MQ=255) tGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGc < 1:342928/52‑1 (MQ=255) tGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGc < 1:2978462/52‑1 (MQ=255) tGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAg > 1:1561243/1‑68 (MQ=255) tGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAg > 1:3550982/1‑68 (MQ=255) tGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAg > 1:3906784/1‑68 (MQ=255) gACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGc < 1:4048600/51‑1 (MQ=255) aCCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGAcg < 1:3488543/70‑1 (MQ=255) aCCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGAcg < 1:940939/70‑1 (MQ=255) gggTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgct > 1:3927980/1‑71 (MQ=255) ggTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgctg < 1:3057308/71‑1 (MQ=255) gtgtCGATAAAAATGCCAATCATCTGGACAATCCCTTg < 1:444833/38‑1 (MQ=255) gtgtCGATAAAAATGCCAATCATCTGGACAAGCCCTTg < 1:574248/38‑1 (MQ=255) tgtCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGa > 1:3071915/1‑47 (MQ=255) tgtCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGa > 1:2112826/1‑47 (MQ=255) tgtCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGa > 1:2440621/1‑47 (MQ=255) gtCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgctgccg > 1:1007670/1‑71 (MQ=255) tCGATAAAAATGCCAATCATCTGGACAATCCCTTgc < 1:649969/36‑1 (MQ=255) tCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGc < 1:3062115/41‑1 (MQ=255) cGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGcc < 1:2332752/54‑1 (MQ=255) gATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgctgccgct < 1:598411/70‑1 (MQ=255) gATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGccgctgccgctg < 1:971084/71‑1 (MQ=255) tgaaaaatgCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaat < 1:1268734‑M1/69‑54 (MQ=255) tgaaaaatgCCAATCATCgattcttcctgagggaacgact < 1:3021313‑M1/38‑23 (MQ=255) tAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGa > 1:3767451/1‑55 (MQ=255) tAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGa > 1:3494633/1‑55 (MQ=255) tAAAAATGCCAATCATCTGAACAATCCCTTGCGCTTCCGGATGCGGAGGCCAGGa > 1:2783342/1‑55 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg > 1:3061555‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg > 1:2026446‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg > 1:2877287‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg > 1:3167882‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaa > 1:2045076‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaa > 1:218220‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaa > 1:1453398‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaa > 1:4177794‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaa > 1:2714590‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGa > 1:3066690/1‑46 (MQ=255) aaaaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGAcgccgc > 1:2330598/1‑60 (MQ=255) aaaaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGctgccgctgccg > 1:2617958/1‑71 (MQ=255) aaaTGCCAATCATCgattcttcctgagggaacgacttatgaaa > 1:3181677‑M1/1‑14 (MQ=255) aaaTGCCAATCATCgattcttcctgagggaacgacttatgaa > 1:3316225‑M1/1‑14 (MQ=255) aaaTGCCAATCATCgattcttcctgagggaacgacttatgaa > 1:2330903‑M1/1‑14 (MQ=255) aaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGt > 1:1520462/1‑71 (MQ=255) tGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGttt < 1:1249100/71‑1 (MQ=255) ccAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcag < 1:1312654‑M1/71‑63 (MQ=255) ccAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgctgccgc > 1:1715053/1‑59 (MQ=255) cAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg < 1:2874785‑M1/62‑55 (MQ=255) aaTCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggc < 1:1962871‑M1/57‑51 (MQ=255) atcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatgagtt > 1:2419422‑M1/1‑6 (MQ=255) atcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagttt < 1:3478682‑M1/71‑66 (MQ=255) atcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagttt < 1:1449193‑M1/71‑66 (MQ=255) atcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagttt < 1:39843‑M1/71‑66 (MQ=255) atcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagttt < 1:4026893‑M1/71‑66 (MQ=255) atcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtt > 1:3854573‑M1/1‑6 (MQ=255) atcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg < 1:3421129‑M1/60‑55 (MQ=255) atcatcgattcttcctgagggaacgacttatgaaactaaaga > 1:729023‑M1/1‑6 (MQ=255) atcatcgattcttcctgagggaacgacttatgaaactaaaga > 1:1697090‑M1/1‑6 (MQ=255) atcatcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGt > 1:2104124/1‑71 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaa > 1:195231‑M1/1‑5 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaa > 1:3519299‑M1/1‑5 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaa > 1:2562446‑M1/1‑5 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaa > 1:3278677‑M1/1‑5 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaa > 1:300551‑M1/1‑5 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggca > 1:752362‑M1/1‑5 (MQ=255) catcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgta < 1:3437860‑M1/60‑57 (MQ=255) catcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgctgc < 1:1003752/51‑1 (MQ=255) catcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTc > 1:1388827/1‑70 (MQ=255) catcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTc > 1:133034/1‑70 (MQ=255) catcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTc > 1:4346026/1‑70 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtttaag > 1:3141716‑M1/1‑3 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtttaag < 1:134216‑M1/71‑69 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtttaag > 1:2780898‑M1/1‑3 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtttaag < 1:2582929‑M1/71‑69 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg > 1:942716‑M1/1‑3 (MQ=255) atcTGGACAATCCCTTTCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGa < 1:133498/71‑1 (MQ=255) atcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCg < 1:2594085/70‑1 (MQ=255) atcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCg < 1:1625401/70‑1 (MQ=255) atcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGa < 1:1347541/71‑1 (MQ=255) atcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGa < 1:1338313/71‑1 (MQ=255) tcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgta < 1:451108‑M1/58‑57 (MQ=255) tcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTg < 1:1379753/63‑1 (MQ=255) tcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTg < 1:2882412/63‑1 (MQ=255) cgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgta > 1:2102842‑M1/1‑1 (MQ=255) | CCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGA > Exported/6995‑7131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |