| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 825034 = | 64 (0.910) | 5 (0.080) | 3/92 | NT | 7.8% | coding (245/354 nt) | ychN | conserved hypothetical protein |
| ? | Exported | 825063 = | 59 (0.910) | coding (216/354 nt) | ychN | conserved hypothetical protein | |||||
CGCCAGTTCCACAAGAGTACCGATTTCCACCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCATTTGCTGAATGTTGTA > Exported/824964‑825104 | gttgcgcgggcaaaaaccaggggaaggctacaacattcagcaaatgctggagatccttaccgctcagaatg < 1:1466451‑M1/1‑1 (MQ=255) tgcgcgggcaaaaaccaggggaaggctacaacattcagcaaatgctggagatccttaccgctcagaatGTa < 1:2844168‑M1/3‑1 (MQ=255) tgcgcgggcaaaaaccaggggaaggctacaacattcagcaaatgctggagatccttaccgctcagaatGTa < 1:2839176‑M1/3‑1 (MQ=255) tgcgcgggcaaaaaccaggggaaggctacaacattcagcaaatgctggagatccttaccgctcagaatGTa < 1:802432‑M1/3‑1 (MQ=255) aGTTCCACAAGAGTACCGATTTCCACCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACa < 1:2957228/71‑1 (MQ=255) ccACAAGAGTACCGATTTCCACCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGt < 1:978886/70‑1 (MQ=255) cacaAGAGTACCGATTTCCACCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGttt < 1:363817/71‑1 (MQ=255) cacaAGAGTACCGATTTCCACCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGtt < 1:3107289/70‑1 (MQ=255) cacaAGAGTACCGATTTCCACCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGtt < 1:43864/70‑1 (MQ=255) caAGAGTACCGATTTCCACCCAATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGtt < 1:499426/68‑1 (MQ=255) aaGAGTACCGATTTCCACCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGt > 1:810226/1‑60 (MQ=255) gTACCGATTTCCACCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGttt < 1:225023/64‑1 (MQ=255) aCCGATTTCCACCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTg > 1:2739867/1‑64 (MQ=255) aCCGATTTCCACCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTg > 1:182169/1‑64 (MQ=255) ccGATTTCCACCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAAttt > 1:1750162/1‑71 (MQ=255) ggaaggctacaacattcagcaaatgctggagatccttaccgctcagaatGTACAGGTTTTGCACAATTTCa < 1:1082621‑M1/22‑1 (MQ=255) ggaaggctacaacattcagcaaatgctggagatccttaccgctcagaatGTACAGGTTTTGCACAATTTCa < 1:1860557‑M1/22‑1 (MQ=255) aTTTCCACCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCAc > 1:3501880/1‑71 (MQ=255) tttCCACCTCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCAc < 1:3350491/70‑1 (MQ=255) tttCCACCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGttt < 1:4436454/57‑1 (MQ=255) tttCCACCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCAc < 1:4163811/70‑1 (MQ=255) tCCACCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTg > 1:1376090/1‑57 (MQ=255) ccACCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCgg < 1:4154789/70‑1 (MQ=255) cACCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCgg < 1:2882879/69‑1 (MQ=255) aCCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCAcc > 1:1359188/1‑66 (MQ=255) aCCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTa > 1:4189598/1‑70 (MQ=255) aCCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTa > 1:3686087/1‑70 (MQ=255) acaacattcagcaaatgctggagatccttaccgctcagaatGTACAGGTTTTGCACAATTTCACCgg < 1:3774326‑M1/26‑1 (MQ=255) caacattcagcaaatgctggagatccttaccgctcagaatg > 1:1105761‑M1/41‑41 (MQ=255) ccATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACAtt > 1:312167/1‑71 (MQ=255) acattcagcaaatgctggagatccttaccgctcagaatGTACa < 1:13789‑M1/5‑1 (MQ=255) aatcaGAGGAAGTGTACTAATCACGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAg > 1:2690684/1‑71 (MQ=255) cagcaaatgctggagatccttaccgctcagaatGTACAGGTTTTGCACAATTTCACCGGTACATTc < 1:3605221‑M1/33‑1 (MQ=255) cagcaaatgctggagatccttaccgctcagaatGTACAGGTTTTGCACAATTTCACCGGTACATTc < 1:1591999‑M1/33‑1 (MQ=255) atcaGAGGAAGTGTACTAATCCCGCGCCCGTCGGCACAGGTTTTGCACAATTTCACCGGTACATTCTGAGc > 1:3362207/1‑71 (MQ=255) tcaGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTc < 1:3413525/53‑1 (MQ=255) tcaGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTc < 1:33244/53‑1 (MQ=255) agagGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCa > 1:979077/1‑52 (MQ=255) agagGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCa > 1:1020268/1‑52 (MQ=255) agagGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCAc > 1:1519935/1‑53 (MQ=255) agagGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTTAGCgg > 1:3791982/1‑70 (MQ=255) agagGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCgg > 1:1242397/1‑70 (MQ=255) agagGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCgg < 1:646220/70‑1 (MQ=255) gAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAgg < 1:3391061/71‑1 (MQ=255) gAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAgg < 1:2067377/71‑1 (MQ=255) gAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAg > 1:4269390/1‑70 (MQ=255) gAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAg > 1:1410176/1‑70 (MQ=255) gAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAg > 1:1183017/1‑70 (MQ=255) aGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGAt < 1:649274/71‑1 (MQ=255) aGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGAt < 1:3032363/71‑1 (MQ=255) aGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGAt > 1:4035565/1‑71 (MQ=255) tACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCgg < 1:2620570/60‑1 (MQ=255) tACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGAtctc > 1:1943504/1‑70 (MQ=255) tACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTcc < 1:2421530/71‑1 (MQ=255) cTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTa > 1:1298480/1‑60 (MQ=255) cTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAg < 1:4004400/71‑1 (MQ=255) tAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAgg < 1:2369779/62‑1 (MQ=255) tAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAgg < 1:4004726/62‑1 (MQ=255) tAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAgg < 1:3297196/62‑1 (MQ=255) aaTCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCa > 1:3389586/1‑71 (MQ=255) aaTCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCa > 1:4265243/1‑71 (MQ=255) aTCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCCCCAGCAt > 1:1260617/1‑71 (MQ=255) ccGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCAttt < 1:4429920/70‑1 (MQ=255) ccGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCAttt < 1:349747/70‑1 (MQ=255) ccGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCATTTg > 1:3953097/1‑71 (MQ=255) ccGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCATTTg > 1:1042105/1‑71 (MQ=255) gcgcCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGc > 1:1645449/1‑64 (MQ=255) gcgcCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGc > 1:4035869/1‑64 (MQ=255) cgcCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCATTTGCTg < 1:483260/71‑1 (MQ=255) cgcCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCATTTGCTg < 1:3715850/71‑1 (MQ=255) cccGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCATTTGCTGaa > 1:587363/1‑71 (MQ=255) ccGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAgg < 1:3884354/51‑1 (MQ=255) ccGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAgg < 1:747425/51‑1 (MQ=255) ccGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAgg < 1:2777865/51‑1 (MQ=255) ccGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAgg < 1:3879439/51‑1 (MQ=255) ccGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAgg < 1:3722026/51‑1 (MQ=255) ccGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAgg < 1:245681/51‑1 (MQ=255) cGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAg < 1:1476571/58‑1 (MQ=255) cGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCATTTGCTGAAtg > 1:1617308/1‑71 (MQ=255) gacGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCATTTGCTGAAtgt > 1:2479921/3‑71 (MQ=255) tCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCATTTGCTGAAtgtt < 1:2081051/71‑1 (MQ=255) tCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCATTTGCTGAAtgtt < 1:2699033/71‑1 (MQ=255) ggTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTaa > 1:3658402/1‑44 (MQ=255) ggTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCATTTGGTGAAtgttg < 1:1234610/70‑1 (MQ=255) GTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCATTTGCTGAATGTTGTa > 1:2566887‑M1/1‑71 (MQ=255) GTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCATTTGCTGAATGTTGTa > 1:2676547‑M1/1‑71 (MQ=255) GTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCATTTGCTGAATGTTGTa > 1:834551‑M1/1‑71 (MQ=255) GTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCATTTGCTGAATGTTGTa > 1:2915386‑M1/1‑71 (MQ=255) | CGCCAGTTCCACAAGAGTACCGATTTCCACCCCATCAATCAGAGGAAGTGTACTAATCCCGCGCCCGTCGGTACAGGTTTTGCACAATTTCACCGGTACATTCTGAGCGGTAAGGATCTCCAGCATTTGCTGAATGTTGTA > Exported/824964‑825104 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |