| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1230703 | 34 (0.480) | 3 (0.050) | 3/94 | NT | 8.2% | coding (2053/2061 nt) | ptrB | protease II |
| ? | Exported | = 1230732 | 35 (0.530) | coding (2024/2061 nt) | ptrB | protease II | |||||
CGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCG > Exported/1230663‑1230797 | cGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAg < 1:2747962‑M2/71‑2 (MQ=255) tttAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAgc > 1:4222470‑M2/1‑68 (MQ=255) tAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAgcgc > 1:4099979/1‑70 (MQ=255) cacTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGAcc < 1:2668506/71‑1 (MQ=255) cacTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGAcc < 1:2263726/71‑1 (MQ=255) cacTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGAc > 1:1676036/1‑70 (MQ=255) aaaCATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGaa > 1:1202369/1‑70 (MQ=255) aaCATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGaa > 1:3925325/1‑69 (MQ=255) cATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGaaaa > 1:1993670/1‑69 (MQ=255) aTTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCa < 1:379235/71‑1 (MQ=255) tATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCata > 1:285873/1‑71 (MQ=255) tATCTGGAAAATACTTAGTCCGCAGCCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCata > 1:1283477/1‑71 (MQ=255) aTCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCatat > 1:2488653/1‑71 (MQ=255) aTCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCatat > 1:3538785/1‑71 (MQ=255) aTCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCatat > 1:3377768/1‑71 (MQ=255) tGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAgcgc < 1:1222538/52‑1 (MQ=255) tGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAg < 1:1921143/63‑1 (MQ=255) tGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAg < 1:4405673/63‑1 (MQ=255) gAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGa > 1:3757798/1‑52 (MQ=255) gAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTcc < 1:3897916/69‑1 (MQ=255) gTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCt < 1:725212/70‑1 (MQ=255) gTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCt > 1:1601917/1‑70 (MQ=255) cAGGCGTAGCGGGTAATGTTCCCTGCGCCAgcggactaagtattttcaagataatgtttcagtgttaaacg < 1:3340398‑M2/71‑42 (MQ=255) aGGCGTAGCGGGTAATGTTCCCTGCGCCAgcggactaagtattttccagataatgtttcagtgttaaa < 1:2535684‑M2/68‑40 (MQ=255) aGGCGTAGCGGGTAATGTTCCCTGCGCCAgcggactaagtat > 1:4249066‑M2/1‑29 (MQ=255) tAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTa < 1:3854862/71‑1 (MQ=255) gCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTa > 1:3289408/1‑69 (MQ=255) gCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTa > 1:3803054/1‑69 (MQ=255) cGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCa < 1:89840/38‑1 (MQ=255) cGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCa < 1:1179124/38‑1 (MQ=255) ggTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCata > 1:391889/1‑38 (MQ=255) ggTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCata > 1:1408906/1‑38 (MQ=255) tGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGAc > 1:1126673/1‑68 (MQ=255) tGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGAc > 1:709101/1‑68 (MQ=255) cccTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGGtt > 1:16423/1‑70 (MQ=255) cccTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGAtt < 1:4192914/70‑1 (MQ=255) cccTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGAtt > 1:1077881/1‑70 (MQ=255) cccTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGAtt > 1:64979/1‑70 (MQ=255) cccTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGAtt > 1:1188738/1‑70 (MQ=255) cccTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGAtt < 1:408322/70‑1 (MQ=255) cccTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGAtt < 1:4003104/70‑1 (MQ=255) cccTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGAtt < 1:2458060/70‑1 (MQ=255) cccTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGAtt > 1:3224063/1‑70 (MQ=255) tGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTAcc > 1:4068825/1‑71 (MQ=255) gcgcCAGCGCGACCAGAAAAGCATATTCCATCGCTa > 1:77633/1‑36 (MQ=255) gcgcCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCg > 1:2064500/1‑71 (MQ=255) ccAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTa < 1:3641219/65‑1 (MQ=255) | CGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCG > Exported/1230663‑1230797 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |