New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | 62035 = | 66 (0.620) | 8 (0.080) | 3/90 | NT | 9.9% | coding (1424/2352 nt) | polB | DNA polymerase II |
? | Exported | 62063 = | 85 (0.870) | coding (1396/2352 nt) | polB | DNA polymerase II |
CGAAGGTTTTCTCGATGCCTGGTTCTCGCGAGAAAAACATTGCCTGCCGGAGATTGTGACTAACATCTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/62106‑62035 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACTGTGCTCTGGATCAGGCTGCGC > Exported/62063‑62132 CGAAGGTTTTCTCGATGCCTGGTTCTCGCGAGAAAAACATTGCCTGCCGGAGAATGTGACTAACATCTGGC < 1:6790555/71‑1 ATTGCCTGCCGGAGATTGTGACTAACATCTGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAA > 1:6638568/1‑70 TGACTAACATCTGGCAGGCAATGTTTTTCTCGCGAGAACCAGG < 1:1411801/43‑1 TGACTAACATCTGGCAGGCAATGTTTTTCTCGCGAGAACCAGG < 1:3548879/43‑1 TGACTAACATCTGGCAGGCAATGTTTTTCTCGCGAGAACCAGG < 1:612726/43‑1 TGACTAACATCTGGCAGGCAATGTTTTTCTCGCGAGAACCAGG < 1:747988/43‑1 ACTAACATCTGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCA > 1:1392877/1‑43 ACTAACATCTGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCA > 1:1517441/1‑43 ACTAACATCTGGCAGGCAATGTTTTTCTCGCGAGAACCAGGCA > 1:2776394/1‑43 CAGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACTGTGCTCTGGATCAGGCT > 1:6058500/1‑68 AGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACTGTGCTCTGGATCAGGCTGCGC < 1:993671/71‑1 CGAAGGTTTTCTCGATGCCTGGTTCTCGCGAGAAAAACATTGCCTGCCGGAGATTGTGACTAACATCTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/62106‑62035 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaGGCAATGTTTTTCTCGCGAGAACCAGGCATCGAGAAAACCTTCGGTACTGTGCTCTGGATCAGGCTGCGC > Exported/62063‑62132 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |