| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 381061 | NA (NA) | 5 (0.100) | 3/90 | NT | NA | coding (164/906 nt) | insD | IS2 insertion element transposase InsAB' |
| ? | AP009048 | = 381076 | NA (NA) | coding (179/906 nt) | insD | IS2 insertion element transposase InsAB' | |||||
Only 100 of 133 total aligned reads displayed.
TCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/380986‑381061‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctccgATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGT < AP009048/381076‑381007 TCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTT > 1:1874740/1‑71TCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTT > 1:2534482/1‑71TCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTT > 1:4054456/1‑71TCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTT > 1:1354065/1‑71 CATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTC > 1:575287/1‑71 CATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTC > 1:2701703/1‑71 CATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTT > 1:3318906/1‑70 CATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTT > 1:652700/1‑70 ATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCT < 1:1410319/71‑1 ATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCT < 1:3060279/71‑1 ATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCT > 1:2294129/1‑71 ATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCT < 1:1121337/71‑1 ATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCT < 1:1833979/71‑1 ATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCT < 1:3419176/71‑1 ATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTC < 1:729539/70‑1 TTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTC > 1:65410/1‑71 TTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTT > 1:303647/1‑68 TCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCC > 1:1289997/1‑71 TCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCC > 1:1160667/1‑71 TCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCC > 1:3871480/1‑71 TCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCC > 1:4726275/1‑71 CTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCC < 1:3195225/70‑1 CTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCC < 1:1663021/70‑1 CTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCC < 1:279625/70‑1 CTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCC < 1:2972929/70‑1 TCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG > 1:2065562/1‑70 TCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG > 1:3618523/1‑70 TCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG > 1:4406641/1‑70 TCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG > 1:5060480/1‑70 TCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGATTCTCC > 1:4468095/1‑69 CAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCC < 1:3315292/68‑1 AGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCTTCACACTGATGATACGGATGTGCTT < 1:360280/63‑1 AGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG < 1:2298012/68‑1 AGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG < 1:3206664/68‑1 AGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG < 1:3884765/68‑1 AGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCC < 1:1100425/67‑1 AGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTC < 1:467867/66‑1 AGACGAACCGATGACTGGATGGATGGCCGCCGCAGGCGTCACACTGATGATACGGATGTGCTTCTCCG < 1:5209676/68‑1 AACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCC < 1:1054941/62‑1 TGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTT < 1:944604/48‑1 GGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGATAACATGGTGTATACG > 1:752654/1‑69 GGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGATAACATGGTGTATACG > 1:1453798/1‑69 GGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTC < 1:4213227/48‑1 GATGGATGCCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCT < 1:1418613/48‑1 ATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCC < 1:211178/49‑1 TGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGATAACATGGTGTATACGGAGAAGCAC < 1:4741949/71‑1 GCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCT < 1:5311439/40‑1 GCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTT > 1:3006853/1‑38 CGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTC < 1:430578/39‑1 CGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGATAACATGGTGTATACGGAG < 1:1160555/58‑1 GCAGTCGTCACTCTGATGATACGGATGTGCTTCTC < 1:4271510/35‑1 TCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCAT > 1:5188064/1‑71 TCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCAT > 1:5098430/1‑71 TCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCAT > 1:4022604/1‑71 TCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCA < 1:2387704/70‑1 TCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCAT < 1:894997/67‑1 TCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCAT < 1:789618/67‑1 TCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGG < 1:4701588/60‑1 TCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGAC < 1:3018229/52‑1 CTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:818290/1‑71 CTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:5058643/1‑71 CTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:3388202/1‑71 CTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:1104458/1‑71 CTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:3763005/1‑71 CTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCC < 1:4074197/64‑1 CTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCA < 1:320711/44‑1 CTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCAT < 1:3357222/42‑1 tcaGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:143751/4‑70 TCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGAGGACTGCGGCGGCCATCCAT < 1:1845000/69‑1 TCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:4745298/1‑70 TCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:4878942/1‑70 TCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:3814154/1‑70 TCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:3054525/1‑70 TCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCAT < 1:3873713/69‑1 TCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGAC > 1:1930053/1‑50 TCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGAC < 1:1419684/50‑1 TCCGATAACATGGTGTATACGGAGAAGCACATCCG < 1:1559423/35‑1 CCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:74792/1‑69 CCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:4381978/1‑69 CCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:5190254/1‑69 CCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGT < 1:5064138/44‑1 CGATAACGTGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC < 1:1307021/68‑1 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCAac < 1:3604387/68‑3 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAG > 1:53959/1‑71 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCA > 1:1575422/1‑70 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCA < 1:776346/70‑1 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCC > 1:5316604/1‑69 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC < 1:959914/68‑1 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC < 1:4938867/68‑1 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC < 1:1318824/68‑1 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC < 1:3523241/68‑1 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCC > 1:4922786/1‑65 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGGGACGACTGCGGCGGCCATCC < 1:2590719/65‑1 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCA < 1:3778377/41‑1 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCA < 1:1548558/41‑1 CGATAACAAGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAG < 1:572151/71‑1 GATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGATGACTGCGGCGGCCATCCAT < 1:2890678/66‑1 GATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGT > 1:2765351/1‑71 GATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGT > 1:4702132/1‑71 GATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGG < 1:700640/55‑1 TCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/380986‑381061‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctccgATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGT < AP009048/381076‑381007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |