| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 2629540 | 24 (0.410) | 3 (0.060) | 3/90 | NT | 11.5% | intergenic (+19/+74) | yfgI/guaA | conserved hypothetical protein/GMP synthetase |
| ? | AP009048 | = 2629551 | 25 (0.480) | intergenic (+30/+63) | yfgI/guaA | conserved hypothetical protein/GMP synthetase | |||||
ATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/2629468‑2629540‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcaaGAATTATAGGATTGAAGTTACTAACATCGATTAATTAAACCAGCTGTCCGATTTGTTCTCTTCTGCTT < AP009048/2629551‑2629484 ATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTT > 1:2221327/1‑70 AAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAAC < 1:5261614/63‑1 AATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTC > 1:2359616/1‑40 ATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAAGAATTATAGGATTGAAGT > 1:492190/1‑59 TTAATCGATGTTAGTAACTTCAAGAATTATAGGATT < 1:3821901/36‑1 AATCGATGTTAGTAACTTCAAGAATTATAGGATTGA > 1:3252666/1‑36 CTTCAAGAATTATAGGATTGAAGTTACTAACATCGATTAATTAAACCAGCTGTCCGATTTGTTCTC < 1:1251005/66‑1 TTCAAGAATTATAGGATTGAAGTTACTAACATCGATTAATTAAACCAGCTGTCCGAT < 1:233010/57‑1 TCAAGAATTATAGGATTGAAGTTACTAACATCGATTAATTAAACC < 1:2519228/45‑1 TCAAGAATTATAGGATTGAAGTTACTAACATCGATTAATTAAA < 1:2817231/43‑1 CAAGAATTATAGGATTGAAGTTACTAACATCGATTAATTAAGCCAGCTGTCCGATTTGTTCTCTTCTGCTT > 1:2049711/1‑71 CAAGAATTATAGGATTGAAGTTACTAACATCGATTAATTAAACCAGCTGTCCGATTTGTTCTCTTCTGCT < 1:4886902/70‑1 AAGAATTATAGGATTGAAGTTACTAACATCGATTAATTAAACCAGCTGTCCGATTTGTTCTCTTCTGCTT < 1:2403791/70‑1 AAGAATTATAGGATTGAAGTTACTAACATCGATTAATTAAACCAGCTGTCCGATTTGTTCTCTTCTGCTT < 1:4067033/70‑1 AAGAATTATAGGATTGAAGTTACTAACATCGATTAATTAAACCAGCTGTCCGATTTGTTCTCTTCTGCTT < 1:4629023/70‑1 AAGAATTATAGGATTGAAGTTACTAACATCGATTAATTAAACCAGCTGTCCGATTTGTTCTCTTC > 1:3653538/1‑65 AAGAATTATAGGATTGAAGTTACTAACATCGATTAATTAAACCAGCTGTCCGATTT < 1:4099979/56‑1 AGAATTATAGGATTGAAGTTACTAACATCGATTAATTAAA > 1:1724800/1‑40 ATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/2629468‑2629540‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcaaGAATTATAGGATTGAAGTTACTAACATCGATTAATTAAACCAGCTGTCCGATTTGTTCTCTTCTGCTT < AP009048/2629551‑2629484 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |