| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 3182534 = | 74 (1.260) | 4 (0.080) | 3/92 | NT | 6.3% | coding (589/654 nt) | ribB | 3,4 dihydroxy‑2‑butanone‑4‑phosphate synthase |
| ? | AP009048 | 3182560 = | 52 (0.980) | coding (563/654 nt) | ribB | 3,4 dihydroxy‑2‑butanone‑4‑phosphate synthase | |||||
Only 100 of 105 total aligned reads displayed.
GGTTTTCAGCTGGCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCGCCATCGTGCCATCGTCATTAGTCAG > AP009048/3182464‑3182600 | ggTTTTCAGCTGGCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCat < 1:1566526/71‑1 (MQ=255) gTTTTCAGCTGGCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCata > 1:266288/1‑71 (MQ=255) ttttCAGCTGGCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCatat > 1:1704163/1‑71 (MQ=255) tttCAGCTGGCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCatat > 1:3244572/1‑70 (MQ=255) ttCAGCTGGCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATAtt < 1:2329123/70‑1 (MQ=255) ttCAGCTGGCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATtg > 1:2660442/1‑71 (MQ=255) ttCAGCTGGCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATtg > 1:4081444/1‑71 (MQ=255) ttCAGCTGGCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATtg > 1:2054746/1‑71 (MQ=255) ttCAGCTGGCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATtg > 1:3155888/1‑71 (MQ=255) taaaccggctggtgtactgtgtgagctgactaatgacgatggcacgatggcgcgtgcaccagagtgTAtt < 1:4773799‑M1/4‑1 (MQ=255) taaaccggctggtgtactgtgtgagctgactaatgacgatggcacgatggcgcgtgcaccagagtgTAtt > 1:471835‑M1/67‑70 (MQ=255) taaaccggctggtgtactgtgtgagctgactaatgacgatggcacgatggcgcgtgcaccagagtgTAtt > 1:4999419‑M1/67‑70 (MQ=255) tCAGCTGGCTTTACGCTCAAGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATtg < 1:3172115/70‑1 (MQ=255) aaaccggctggtgtactgtgtgagctgactaatgacgatggcacgatggcgcgtgcaccagagtgTATtg > 1:2060606‑M1/66‑70 (MQ=255) cAGCTGGCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATtgtg > 1:2646801/1‑71 (MQ=255) aGCTGGCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTgtgt < 1:3050954/71‑1 (MQ=255) cggctggtgtactgtgtgagctgactaatgacgatggcacgatggcgcgtgcaccagagtgTAtt > 1:2439486‑M1/62‑65 (MQ=255) ggCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTAt > 1:3819014/1‑71 (MQ=255) gCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTa < 1:747599/69‑1 (MQ=255) gCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTa < 1:2329646/69‑1 (MQ=255) gCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTa < 1:3448937/69‑1 (MQ=255) gCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTa < 1:1980256/69‑1 (MQ=255) gCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTa < 1:603277/69‑1 (MQ=255) gCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTa < 1:1533269/69‑1 (MQ=255) gCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTAtt > 1:553423/1‑71 (MQ=255) gCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTAt < 1:3622838/70‑1 (MQ=255) gCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTAt < 1:3029419/70‑1 (MQ=255) gCTTTACGCTCATGTGCCTGACGGTATGCCAACAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTAt < 1:2920091/70‑1 (MQ=255) tttACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATtg < 1:2790510/61‑1 (MQ=255) tttACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTa < 1:1672336/67‑1 (MQ=255) tttACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTgg > 1:3329669/1‑71 (MQ=255) ttACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTa < 1:4347453/66‑1 (MQ=255) tACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTAt > 1:700658/1‑66 (MQ=255) tACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTg > 1:5304343/1‑68 (MQ=255) tACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTg > 1:467644/1‑68 (MQ=255) aCGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCa < 1:4746384/70‑1 (MQ=255) aCGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCa > 1:4299357/1‑70 (MQ=255) tactgtgtgagctgactaatgacgatggcacgatggcgcgtgcaccagagtgTa < 1:4794853‑M1/2‑1 (MQ=255) tactgtgtgagctgactaatgacgatggcacgatggcgcgtgcaccagagtgTAt < 1:1682847‑M1/3‑1 (MQ=255) gCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAAc > 1:1116646/1‑71 (MQ=255) ctgtgtgagctgactaatgacgatggcacgatggcgcgtgcaccagagtgTa < 1:4919745‑M1/2‑1 (MQ=255) tgtgtgagctgactaatgacgatggcacgatggcgcgtgcaccagagtgTATTGTGTTTATTGGCaaa < 1:2068599‑M1/19‑1 (MQ=255) tgtgtgagctgactaatgacgatggcacgatggcgcgtgcaccagagtgTATTGTGTTTATTGGCaaa < 1:4811436‑M1/19‑1 (MQ=255) tCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACt > 1:1577831/1‑70 (MQ=255) gtgtgagctgactaatgacgatggcacgatggcgcgtgcaccagagtgTAtt > 1:3579163‑M1/49‑52 (MQ=255) cATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCaaa > 1:5062476/1‑67 (MQ=255) atttgCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCaa < 1:3170673/68‑1 (MQ=255) gtgCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATa > 1:1666159/1‑71 (MQ=255) gACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCatat > 1:2013320/1‑42 (MQ=255) gACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCaaa > 1:533972/1‑58 (MQ=255) aCGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACActc < 1:4604934/69‑1 (MQ=255) aCGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTg < 1:2198203/71‑1 (MQ=255) aCGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTg < 1:2099009/71‑1 (MQ=255) cGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTgg > 1:802609/1‑71 (MQ=255) cGGTATGCCACCAGGTCTTCAATAGTCACGA‑‑GCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTg < 1:1915257/71‑1 (MQ=255) ggTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTa < 1:1535616/47‑1 (MQ=255) ggTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTa < 1:4156396/47‑1 (MQ=255) ggTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACActc < 1:1817525/67‑1 (MQ=255) tATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTg > 1:5139968/1‑70 (MQ=255) atgacgatggcacgatggcgcgtgcaccagagtgTATTGTGTTTATTGGCAAACTCAATACACTCTGGTg > 1:4087571‑M1/35‑70 (MQ=255) tGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCaa > 1:5003940/1‑56 (MQ=255) tGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCAc > 1:3985017/1‑71 (MQ=255) gCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATa > 1:4817866/1‑57 (MQ=255) ccaccaGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCAcgc < 1:1874722/71‑1 (MQ=255) caccaGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTAtt > 1:4590419/1‑42 (MQ=255) caccaGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCAcgcg > 1:4247703/1‑71 (MQ=255) caccaGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCAcgcg > 1:3421890/1‑71 (MQ=255) caccaGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCAcgcg > 1:1089163/1‑71 (MQ=255) accaGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACgcgc > 1:3239414/1‑71 (MQ=255) ccaGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCgcc < 1:4964841/71‑1 (MQ=255) aGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCaaa < 1:2110710/44‑1 (MQ=255) aGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCa < 1:2065340/48‑1 (MQ=255) aGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCgccat < 1:4003689/71‑1 (MQ=255) ggTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCgccatc < 1:3163774/71‑1 (MQ=255) ggTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCgccat > 1:1288871/1‑70 (MQ=255) gTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAAc < 1:3534700/43‑1 (MQ=255) gTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCgccatcg > 1:4432336/1‑71 (MQ=255) cTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTg > 1:1418978/1‑54 (MQ=255) cTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCgccatcgtg > 1:797940/1‑71 (MQ=255) ttCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCgccatcgtgc > 1:5203818/1‑71 (MQ=255) ttCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCgccatcgtgc > 1:4955114/1‑71 (MQ=255) ttCAATAGTCACGAGCGCCATATTGTGTTTATTGGAAAACTCAATACACTCTGGTGCACGCgccatcgtgc > 1:624944/1‑71 (MQ=255) ggcgcgtgcaccagagtgTATTGTGTTTATTGGCAAACTc > 1:1748884‑M1/19‑40 (MQ=255) cAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCgccatcgtgcca > 1:1239718/1‑71 (MQ=255) cAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCgccatcgtgcca > 1:505390/1‑71 (MQ=255) cAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCgccatcgtccc > 1:2484963/1‑70 (MQ=255) aaTAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCgccatcgtgccat < 1:218487/71‑1 (MQ=255) aaTAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCgccatcgtgcca < 1:117735/70‑1 (MQ=255) aaTAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCgccatcgtgcca < 1:1396597/70‑1 (MQ=255) tAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACAct > 1:410069/1‑45 (MQ=255) gTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCgccatcgtgccatcgt < 1:296621/70‑1 (MQ=255) aCGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCGCCATCGTGCCATCGTCAt > 1:1724023/1‑70 (MQ=255) aCGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCGCCATCGTGCCATCGTCAt > 1:413797/1‑70 (MQ=255) gAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCgccatcgtgccat > 1:2271580/1‑62 (MQ=255) gAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCGCCATCGTGCCATCGTCATTAg < 1:4053088/71‑1 (MQ=255) gcgcCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCGCCATCGTGCCATCGTCATTAGTc < 1:4839764/71‑1 (MQ=255) cgcCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCGCCATCGTGCCATCGTCATTAGTCa < 1:5084903/71‑1 (MQ=255) gcCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCgccatcg < 1:4723102/52‑1 (MQ=255) gcCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCGCCATCGTGCCATCGTCATTAGTCAg < 1:4331694/71‑1 (MQ=255) cATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCAcg < 1:1944035/42‑1 (MQ=255) | GGTTTTCAGCTGGCTTTACGCTCATGTGCCTGACGGTATGCCACCAGGTCTTCAATAGTCACGAGCGCCATATTGTGTTTATTGGCAAACTCAATACACTCTGGTGCACGCGCCATCGTGCCATCGTCATTAGTCAG > AP009048/3182464‑3182600 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |