| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 4380976 = | 55 (0.940) | 3 (0.060) | 3/94 | NT | 5.1% | intergenic (+31/‑21) | efp/ecnA | Elongation factor EF‑P/entericidin A membrane lipoprotein, antidote entericidin B |
| ? | AP009048 | 4381000 = | 61 (1.130) | coding (4/126 nt) | ecnA | entericidin A membrane lipoprotein, antidote entericidin B | |||||
TACCCGCTCTGGTGAATACGTCTCTCGCGTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAGCACGCTGCTCAC > AP009048/4380909‑4381046 | cgcgagcggtgttacagcccgtgagcagcgtgctggcaagcaaaacaagaacgataaggcgtttcatcat > 1:1337460‑M1/68‑70 (MQ=255) cgagcggtgttacagcccgtgagcagcgtgctggcaagcaaaacaagaacgataaggcgtttcatc > 1:5045844‑M1/66‑66 (MQ=255) gagcggtgttacagcccgtgagcagcgtgctggcaagcaaaacaagaacgataaggcgtttcatcatc < 1:1071291‑M1/4‑1 (MQ=255) cGCTCTGGTGAATACGTCTCTCGCGTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACtt < 1:279251/71‑1 (MQ=255) tGGTGAATACGTCTCTCGCGTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTAtt < 1:1631972/69‑1 (MQ=255) gTGAATACGTCTCTCGCGTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCAt < 1:2861333/59‑1 (MQ=255) gTGAATACGTCTCTCGCGTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCAc > 1:2988512/1‑62 (MQ=255) gTGAATACGTCTCTCGCGTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAg < 1:3535821/70‑1 (MQ=255) tGAATACGTCTCTCGCGTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGt < 1:3390997/71‑1 (MQ=255) gAATACGTCTCTCGCGTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATc < 1:3606267/58‑1 (MQ=255) acagcccgtgagcagcgtgctggcaagcaaaacaagaacgataaggcgtttcacCATCACTTATTCAGGt < 1:1279304‑M1/16‑1 (MQ=255) aaTACGTCTCTCGCGTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGt > 1:3744336/1‑69 (MQ=255) aTACGTCTCTCGCGTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCag < 1:5209428/71‑1 (MQ=255) aTACGTCTCTCGCGTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCCGCACCATCACTTATTCAGGTc < 1:1291190/69‑1 (MQ=255) tACGTCTCTCGCGTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTc > 1:4538097/1‑63 (MQ=255) tACGTCTCTCGCGTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAg > 1:3111371/1‑65 (MQ=255) tACGTCTCTCGCGTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCaga < 1:942433/71‑1 (MQ=255) aCGTCTCTCGCGTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTc > 1:796480/1‑62 (MQ=255) ccgtgagcagcgtgctggcaagcaaaacaagaacgataaggcgtttcatca < 1:2490061‑M1/2‑1 (MQ=255) cGTCTCTCGCGTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAgaga < 1:1768034/71‑1 (MQ=255) tctcGCGTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAg > 1:4232825/1‑59 (MQ=255) gcgTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAgatg < 1:1550682/65‑1 (MQ=255) gcgTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGAtgatga < 1:5006639/69‑1 (MQ=255) gcgTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGaaa > 1:2363782/1‑71 (MQ=255) aGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACATATTCAGGTCAGAGATGATGAAACGCCt > 1:1207342/1‑70 (MQ=255) gTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTa > 1:1284018/1‑71 (MQ=255) aaTGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAgatgat < 1:534124/58‑1 (MQ=255) aTGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCg > 1:4491343/1‑71 (MQ=255) tGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGAtgatga < 1:5241792/58‑1 (MQ=255) gCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCg > 1:659550/1‑69 (MQ=255) cGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTc > 1:2878355/1‑71 (MQ=255) ttGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTg > 1:4517918/1‑71 (MQ=255) ttGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTg < 1:913076/71‑1 (MQ=255) ttGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTg < 1:2599028/71‑1 (MQ=255) tgtgGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGt > 1:4635594/1‑71 (MQ=255) gtggtgCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGAtgatga < 1:2285521/51‑1 (MQ=255) gtggtgCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGtt > 1:163854/1‑71 (MQ=255) gtggtgCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGt < 1:4603347/70‑1 (MQ=255) gtggtgCGGCCTGCAGGCTGCACCATCACTTATTAAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGt < 1:1968983/70‑1 (MQ=255) tggtgCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGtt < 1:3888567/70‑1 (MQ=255) caagaacgataaggcgtttcatCATCACTTATTCAGGTCagag < 1:3180346‑M1/21‑1 (MQ=255) tgCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGcc < 1:4626114/53‑1 (MQ=255) tgCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGcc < 1:308992/53‑1 (MQ=255) gCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTttgct > 1:3171806/1‑71 (MQ=255) gCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTttgct > 1:4932801/1‑71 (MQ=255) cGGCCTGCAGGCTGCACCATGACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTttgctt > 1:4952484/1‑71 (MQ=255) cGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGaa > 1:492126/1‑46 (MQ=255) cGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTttgctt > 1:81770/1‑71 (MQ=255) cGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTttgctt > 1:958085/1‑71 (MQ=255) gataaggcgtttcatCATCACTTATTCAGGTCAGAgat < 1:354112‑M1/23‑1 (MQ=255) tGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGaa > 1:3929957/1‑41 (MQ=255) tGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATc > 1:2659596/1‑51 (MQ=255) gCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTttg > 1:5271279/1‑62 (MQ=255) gCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTttg > 1:3633077/1‑62 (MQ=255) gCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAg > 1:1879959/1‑70 (MQ=255) cAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAg < 1:1601679/69‑1 (MQ=255) cAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAg < 1:2555371/69‑1 (MQ=255) cAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAGCa > 1:3779185/1‑71 (MQ=255) aGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCa > 1:148072/1‑67 (MQ=255) aGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAGCAc > 1:1614736/1‑71 (MQ=255) gCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAGc > 1:3430178/1‑67 (MQ=255) gCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAGCACgc < 1:31701/71‑1 (MQ=255) gCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAGCACgc < 1:5203093/71‑1 (MQ=255) gCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAGCACg > 1:3816728/1‑70 (MQ=255) tGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAGCACgctg > 1:1889990/1‑71 (MQ=255) cACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAGCACgctgct > 1:2113434/1‑71 (MQ=255) aCCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGtt < 1:2782230/50‑1 (MQ=255) CATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAGCACgctg < 1:4228247‑M1/66‑1 (MQ=255) CATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAGCACTCTGCTCAc > 1:2490780‑M1/1‑71 (MQ=255) CATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAGCACGCTGCTCAc > 1:1955541‑M1/1‑71 (MQ=255) CATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAGCACGCTGCTCAc < 1:4783759‑M1/71‑1 (MQ=255) CATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAGCACGCTGCTCAc > 1:4665027‑M1/1‑71 (MQ=255) CATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAGCACGCTGCTCAc < 1:4337973‑M1/71‑1 (MQ=255) CATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAGCACGCTGCTCAc < 1:1004771‑M1/71‑1 (MQ=255) | TACCCGCTCTGGTGAATACGTCTCTCGCGTGAAGTAATGCGGTTGTGGTGCGGCCTGCAGGCTGCACCATCACTTATTCAGGTCAGAGATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAGCACGCTGCTCAC > AP009048/4380909‑4381046 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |