| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 169383 | 46 (0.790) | 3 (0.060) | 3/94 | NT | 5.7% | coding (1900/2244 nt) | fhuA | ferrichrome outer membrane transporter |
| ? | AP009048 | = 169404 | 56 (1.040) | coding (1921/2244 nt) | fhuA | ferrichrome outer membrane transporter | |||||
TCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGTCCGCTTTCAGGTCT > AP009048/169336‑169471 | tCGGTTCTTATACTTACACCGATGCGGAATACACAACCGATACTACCTATAAAGGCAATACGCCTGCACag < 1:3511947‑M2/71‑3 (MQ=255) ggTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACaggt < 1:4627281‑M2/71‑5 (MQ=255) ataCTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCaa < 1:4680655/69‑1 (MQ=255) taCTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCaaaa > 1:3932575/1‑70 (MQ=255) taCTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCaaaa > 1:4342745/1‑70 (MQ=255) taCTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCaaaa < 1:2090222/70‑1 (MQ=255) cTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAacac < 1:4299493/71‑1 (MQ=255) ttACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAaca < 1:5344132/69‑1 (MQ=255) acacCGATGCGGAAAACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAAcaca > 1:1381871/1‑69 (MQ=255) cacCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACag < 1:883426‑M2/55‑3 (MQ=255) acCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACAt < 1:3153938/68‑1 (MQ=255) cGATGCGGAAAACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCtt < 1:1777265/71‑1 (MQ=255) aTGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAaca > 1:357100/1‑61 (MQ=255) aTGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCg < 1:4805308/71‑1 (MQ=255) aTGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCg > 1:860373/1‑71 (MQ=255) gCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCg < 1:4528193/69‑1 (MQ=255) cGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGtt < 1:3746044/70‑1 (MQ=255) cGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTtg < 1:551861/71‑1 (MQ=255) caccacCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCt > 1:1062252/1‑70 (MQ=255) caccacCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCt < 1:238067/70‑1 (MQ=255) caccacCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTg < 1:2827485/71‑1 (MQ=255) ccaccGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGAc > 1:3988903/1‑71 (MQ=255) caccGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCtt < 1:2831112/56‑1 (MQ=255) caccGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGAc > 1:4594516/1‑70 (MQ=255) caccGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGGTGTGGGCTGAc > 1:152189/1‑70 (MQ=255) cGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTaca > 1:4136323/1‑71 (MQ=255) cGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTaca > 1:2266150/1‑71 (MQ=255) tactacCTATAAAGGCAATACGCCTGCACaggtagtatcggtggtgtattccgcatcggtgtaagtat < 1:2794318‑M2/68‑40 (MQ=255) tactacCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTc > 1:2647911/1‑51 (MQ=255) ctacCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACcttc < 1:2998932/71‑1 (MQ=255) ccTATAAAGGCAATACGCCTGCACaggtagtatcggtggtgtattccgcatcggtgtaagtataagaacc < 1:255373‑M2/70‑47 (MQ=255) ccTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACcttct < 1:4658029/69‑1 (MQ=255) ccTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACcttct < 1:4298731/69‑1 (MQ=255) ccTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCttt > 1:5264830/1‑71 (MQ=255) ccTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCttt < 1:4733839/71‑1 (MQ=255) ccTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCttt < 1:3066040/71‑1 (MQ=255) tataAAGGCAATACGCCTGCACaggtagtatcggtggtgtattccgcatcggtgtaagtataagaagcga < 1:3730185‑M2/70‑49 (MQ=255) tataAAGGCAATACGCCTGCACAGGTGCCAAAACACAt > 1:834734/1‑38 (MQ=255) ataAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGt > 1:4248918/1‑45 (MQ=255) ataAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGAc > 1:914650/1‑71 (MQ=255) taAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGa < 1:4784953/69‑1 (MQ=255) taAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGa < 1:3646372/69‑1 (MQ=255) aaaGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACgg > 1:3454769/1‑71 (MQ=255) aaGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGt > 1:4746504/1‑71 (MQ=255) aaGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGt > 1:2519047/1‑71 (MQ=255) aaGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGt > 1:4752865/1‑71 (MQ=255) aaGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGt > 1:334022/1‑71 (MQ=255) aaGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGt > 1:2258074/1‑71 (MQ=255) aGGCAATACGCCTGCACAGGTGCCAAAACACATTGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGTc > 1:2288091/1‑71 (MQ=255) aGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTaca > 1:3442922/1‑56 (MQ=255) ggCAATACGCCTGCACAGGTGCCAAAACACATGGCt < 1:3878903/36‑1 (MQ=255) ggCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGTcc < 1:4051458/71‑1 (MQ=255) aTACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGTCCGCtt > 1:3209123/1‑71 (MQ=255) tACGCCTGCACAGGTGCCAAAACACATGGCTTCGTtg < 1:2676723/37‑1 (MQ=255) tACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGTCCGCttt > 1:4394737/1‑71 (MQ=255) tACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGTCCGCttt < 1:1217953/71‑1 (MQ=255) aCGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTaca > 1:869198/1‑49 (MQ=255) aCGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGTCCGCttt > 1:4184824/1‑70 (MQ=255) cGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGTCCGCttt > 1:3885023/1‑69 (MQ=255) cGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGTCCGCTTTc < 1:4211086/70‑1 (MQ=255) gCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGTCCGCttt < 1:1205503/68‑1 (MQ=255) cTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGa > 1:1111947/1‑40 (MQ=255) cTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCttt < 1:3036928/53‑1 (MQ=255) tGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGAc < 1:2283907/40‑1 (MQ=255) tGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTa < 1:2352252/42‑1 (MQ=255) tGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCttt < 1:2834111/52‑1 (MQ=255) gCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGt < 1:1577859/57‑1 (MQ=255) gCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGTc > 1:3910979/1‑58 (MQ=255) gCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGTCCGCTTTCAGGTCt > 1:3438799/1‑71 (MQ=255) cacaGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTa > 1:4036250/1‑40 (MQ=255) cacaGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGTcc > 1:4743009/1‑58 (MQ=255) cacaGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGTCCGCttt > 1:57938/1‑63 (MQ=255) cacaGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGTCCGCTTTCAGGTCt < 1:5105435/70‑1 (MQ=255) | TCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGTCCGCTTTCAGGTCT > AP009048/169336‑169471 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |