| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 2901661 | 71 (1.210) | 4 (0.080) | 3/92 | NT | 5.6% | coding (1110/1479 nt) | ygcE | predicted kinase |
| ? | AP009048 | = 2901673 | 72 (1.360) | coding (1122/1479 nt) | ygcE | predicted kinase | |||||
Only 100 of 102 total aligned reads displayed.
AAAGCGTGGCGCTGACGCTGAAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGACGTGTTCAACCTTC > AP009048/2901603‑2901743 | aaaGCGTGGCGCTGACGCTGAAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCAt > 1:3269697/1‑71 (MQ=255)aaaGCGTGGCGCTGACGCTGAAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCAt < 1:4345767/71‑1 (MQ=255)aaaGCGTGGCGCTGACGCTGAAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCAt < 1:4399372/71‑1 (MQ=255) gCGTGGCGCTGACGCTGAAGAACAATTACGACAATATGTGTAATGAAATGAATCACTATGCGAAGCATgtg > 1:4965825‑M2/1‑68 (MQ=255) cGTGGCGCTGACGCTGAAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATgtga > 1:3681636‑M2/1‑67 (MQ=255) gTGGCGCTGACGCTGAAGAACAATTACGAAAATATGTGTAATGAAATGAATCACTTTGCGAAGCATgtgat > 1:838636‑M2/1‑66 (MQ=255) ggCGCTGACGCTGAAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCa > 1:2165239/1‑71 (MQ=255) gcgcTGACGCTGAAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCAt < 1:1915662/71‑1 (MQ=255) cgctgacgctgaAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCAt > 1:330563/1‑70 (MQ=255) gctgacgctgaAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTa < 1:4332978/71‑1 (MQ=255) ctgacgctgaAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTAc > 1:2527893/1‑71 (MQ=255) ctgacgctgaAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTAc > 1:4370769/1‑71 (MQ=255) tgacgctgaAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTAc > 1:3992522/1‑70 (MQ=255) acgctgaAGAACAATTACGACAATATGTGTAATGAAATCAATCACTTTGCGAAGCATGTGATCATTACTgg > 1:1681770/1‑71 (MQ=255) cgctgaAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTggc > 1:3143688/1‑71 (MQ=255) cgctgaAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTggc > 1:4201708/1‑71 (MQ=255) cgctgaAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTggc > 1:4195310/1‑71 (MQ=255) cgctgaAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTggc < 1:2473465/71‑1 (MQ=255) cgctgaAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTggc < 1:5203170/71‑1 (MQ=255) aagaaCAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATgt > 1:4611887‑M2/1‑51 (MQ=255) aagaaCAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATg > 1:1740377‑M2/1‑51 (MQ=255) aagaaCAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATg > 1:2444103‑M2/1‑51 (MQ=255) aaCAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTc < 1:5042226/71‑1 (MQ=255) aCAATTACGACAATATGTGTAATGATATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCg < 1:4715751/71‑1 (MQ=255) aCAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTc > 1:1983515/1‑70 (MQ=255) aCAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTc < 1:4740898/70‑1 (MQ=255) aCAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCg < 1:2501850/71‑1 (MQ=255) aCAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCg < 1:233868/71‑1 (MQ=255) aaTTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATgtg > 1:2367109‑M2/1‑45 (MQ=255) aaTTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGaa < 1:3743947/71‑1 (MQ=255) aTTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTAc > 1:1643971/1‑55 (MQ=255) aTTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTAc > 1:397188/1‑55 (MQ=255) aTTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGaa < 1:1114168/70‑1 (MQ=255) aTTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAAc < 1:832072/71‑1 (MQ=255) ttACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTgg > 1:2388612/1‑57 (MQ=255) ttACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTgg > 1:1129038/1‑57 (MQ=255) ttACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGt < 1:1899130/64‑1 (MQ=255) ttACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGaa > 1:2149361/1‑69 (MQ=255) ttACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGaa > 1:2993886/1‑69 (MQ=255) ttACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACa < 1:2950227/71‑1 (MQ=255) aCGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATgtgat < 1:140169‑M2/46‑6 (MQ=255) aCGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATgtgat < 1:710117‑M2/46‑6 (MQ=255) aCGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGc > 1:198111/1‑71 (MQ=255) cGACAATATGTTTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGc > 1:4544950/1‑70 (MQ=255) cGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCAtt < 1:5092446/49‑1 (MQ=255) cGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCg < 1:2964246/71‑1 (MQ=255) gACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCAtt < 1:4095138/48‑1 (MQ=255) cAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATc < 1:728253/71‑1 (MQ=255) cAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATc > 1:220135/1‑71 (MQ=255) aaTATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCt < 1:3399485/71‑1 (MQ=255) aaTATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCt < 1:3690173/71‑1 (MQ=255) atatGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCt < 1:4887982/70‑1 (MQ=255) atatGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTg < 1:1536785/71‑1 (MQ=255) tatGTGTAATGAAATGAATCACTTTGCGAAGCATgtgat < 1:3242798‑M2/39‑6 (MQ=255) tatGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTg < 1:5343275/70‑1 (MQ=255) tgtgTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGtt > 1:1502868/1‑70 (MQ=255) tgtgTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGtt < 1:3304589/70‑1 (MQ=255) tgtgTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGtt < 1:1996386/70‑1 (MQ=255) tgtAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTa < 1:4386386/70‑1 (MQ=255) tgtAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTa < 1:4392619/70‑1 (MQ=255) gtAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGc < 1:3291577/59‑1 (MQ=255) gtAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATg > 1:454528/1‑71 (MQ=255) tAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACt > 1:3711326/1‑40 (MQ=255) atgaaatgaaTCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGa > 1:2796651/1‑51 (MQ=255) aaatgaaTCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGAtt < 1:4082241/71‑1 (MQ=255) aatgaaTCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGa > 1:130979/1‑68 (MQ=255) aatgaaTCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGAttt > 1:3207162/1‑71 (MQ=255) aatgaaTCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGAttt < 1:2751964/71‑1 (MQ=255) atgaaTCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGAtttt > 1:4859267/1‑71 (MQ=255) atgaaTCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGAtttt < 1:3434746/71‑1 (MQ=255) tgaaTCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAAc < 1:1047291/47‑1 (MQ=255) aaTCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAg > 1:4281515/1‑47 (MQ=255) aaTCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGAt > 1:4630648/1‑51 (MQ=255) aTCACTTTGCGAAGCATgtgattcatttcattacacatattgtcgtaattgttcttcagcgtcagcg > 1:890762‑M2/1‑17 (MQ=255) tCACTTTGCGAAGCATgtgattcatttcattacacatattg > 1:2811377‑M2/1‑16 (MQ=255) tCACTTTGCGAAGCATGTGATCATTACTGGcggcgg > 1:86748/1‑36 (MQ=255) tCACTTTGCGAAGCATGTGATCATTACTGGcggcgg > 1:781580/1‑36 (MQ=255) tCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCg < 1:3994363/40‑1 (MQ=255) tCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGcc > 1:1502519/1‑70 (MQ=255) tCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCg < 1:3013857/71‑1 (MQ=255) cACTTTGCGAAGCATgtgattcatttcattacacatattg > 1:1270531‑M2/1‑15 (MQ=255) aCTTTGCGAAGCATgtgatccatttcattacacatattgtcgtaattgttcttcagcgtcagcgccacgct > 1:2580913‑M2/1‑14 (MQ=255) aCTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGAc > 1:870680/1‑71 (MQ=255) aCTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGAc < 1:2291066/71‑1 (MQ=255) aCTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGAc > 1:1820757/1‑71 (MQ=255) tttGCGAAGCATGTGATCATTACTGGCGGCGGTTCg < 1:2106538/36‑1 (MQ=255) tGCGAAGCATGTGATCATTACTGGCGGCGGTTCGaa > 1:5181797/1‑36 (MQ=255) tGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGACgt < 1:3092517/69‑1 (MQ=255) tGCGAAGCATGAGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGACgtg < 1:2976844/70‑1 (MQ=255) gCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGACgtgt < 1:61187/70‑1 (MQ=255) gCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGACgtgt < 1:2061191/70‑1 (MQ=255) cGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGACGTGTTc < 1:4174300/71‑1 (MQ=255) gAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGttt < 1:2346699/46‑1 (MQ=255) gAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGACGTGTTCa < 1:2538644/71‑1 (MQ=255) aGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGACGTGTTCAAc > 1:4139860/1‑71 (MQ=255) aGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGACGTGTTCAAc > 1:1265813/1‑71 (MQ=255) gCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGttt < 1:323365/43‑1 (MQ=255) gCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGACGTGTTCAAcc > 1:2490309/1‑71 (MQ=255) aTGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGACGTGTTCAACCtt > 1:5369515/1‑71 (MQ=255) tgtgATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGACGTGTTCAACCTTc < 1:5342705/71‑1 (MQ=255) | AAAGCGTGGCGCTGACGCTGAAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGACGTGTTCAACCTTC > AP009048/2901603‑2901743 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |