New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Exported 204714 =NA (NA)6 (0.130) 3/86 NT NA noncoding (131/2904 nt) rrlH 23S ribosomal RNA
?Exported 204732 = NA (NA)noncoding (149/2904 nt) rrlH 23S ribosomal RNA

CTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Exported/204788‑204714
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acacactATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAA  >  Exported/204732‑204800
                                                                                                                                                
CTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACA                                                                           <  1:2070390/71‑1
CTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACA                                                                           >  1:1071482/1‑71
CTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACA                                                                           <  1:3394692/71‑1
CTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACA                                                                           >  1:219877/1‑71
CTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACA                                                                           >  1:1542940/1‑71
  TAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACA                                                                         >  1:2117205/1‑71
   AGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        >  1:1075578/1‑71
   AGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        >  1:2680404/1‑71
   AGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        >  1:133957/1‑71
   AGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        >  1:2574665/1‑71
   AGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        >  1:2573958/1‑71
   AGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAA                                                                             >  1:3469149/1‑66
   AGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAA                                                                             >  1:2959013/1‑66
   AGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAA                                                                             >  1:2421386/1‑66
    GATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATTGATTCAGTTAATGATAGTGTGTCGAAACACACT                                                                       >  1:19077/1‑71
    GATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACACT                                                                       <  1:1367279/71‑1
    GATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACACT                                                                       <  1:2995500/71‑1
    GATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACACT                                                                       >  1:2088147/1‑71
    GATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACACT                                                                       <  1:960489/71‑1
    GATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        <  1:3300334/70‑1
    GATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        <  1:2512375/70‑1
         TTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTTTCGACACACTATCAT                                                                  >  1:3257568/1‑71
         TTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTTTCGACACACTATCAT                                                                  >  1:3113787/1‑71
          TCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        <  1:2453365/64‑1
          TCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        <  1:1245818/64‑1
            AGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTTTCGACACACTATCATTAA                                                               <  1:2550473/71‑1
            AGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTTTCGACACACTATCATTAA                                                               <  1:618551/71‑1
            AGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTTTCGACACACTATCATTAA                                                               <  1:2566341/71‑1
            AGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        >  1:553549/1‑62
                CCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAAC                                                                            >  1:81153/1‑54
                CCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAAC                                                                            >  1:1553509/1‑54
                  CCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAA                                                                             >  1:1723796/1‑51
                  CCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAA                                                                             >  1:2254409/1‑51
                     GGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        >  1:622115/1‑53
                     GGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        >  1:2565056/1‑53
                     GGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        >  1:3286648/1‑53
                             TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        <  1:1822237/45‑1
                             TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        <  1:1818141/45‑1
                             TCATTAAACTATGGATTCAGTTAATGATAGTGTGTCGAAACA                                                                           >  1:1912703/1‑42
                              CATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACA                                                                           >  1:3319559/1‑41
                              CATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACA                                                                           >  1:3400953/1‑41
                              CATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACA                                                                           >  1:1047186/1‑41
                              CATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAAC                                                                            >  1:2352824/1‑40
                              CATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAAC                                                                            >  1:1524981/1‑40
                              CATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAAC                                                                            >  1:2356754/1‑40
                              CATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAAC                                                                            >  1:2049886/1‑40
                               ATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACA                                                                         >  1:1809460/1‑42
                               ATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACA                                                                         >  1:374434/1‑42
                               ATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACA                                                                         >  1:143601/1‑42
                               ATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAA                                                                             >  1:633207/1‑38
                               ATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAA                                                                             >  1:1154355/1‑38
                               ATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAA                                                                             >  1:524200/1‑38
                               ATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAA                                                                             >  1:28247/1‑38
                               ATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAA                                                                             >  1:1271480/1‑38
                               ATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAA                                                                             >  1:2384087/1‑38
                                  AACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        >  1:679549/1‑40
                                  AACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        >  1:685995/1‑40
                                  AACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        >  1:3006553/1‑40
                                  AACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        >  1:2369508/1‑40
                                  AACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACAC                                                                        >  1:1888260/1‑40
                                                     TGATAGTGTGTCGAAACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAA                      >  1:2545017/1‑71
                                                     TGATAGTGTGTCGAAACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAA                      >  1:3476884/1‑71
                                                     TGATAGTGTGTCGAAACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAA                      >  1:2239655/1‑71
                                                               TCGAAACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGT             <  1:870779/70‑1
                                                                    ACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCG       <  1:1022902/71‑1
                                                                     CACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCG       <  1:1994017/70‑1
                                                                     CACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCC        >  1:1186399/1‑69
                                                                     CACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCC        >  1:1786547/1‑69
                                                                     CACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCC        >  1:3403759/1‑69
                                                                      ACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCC        <  1:1686150/68‑1
                                                                       CACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAA                       <  1:2427608/52‑1
                                                                       CACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACT                          <  1:2936333/49‑1
                                                                       CACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGG                              <  1:2768345/45‑1
                                                                        ACTATCATTAACTGAATCCATAGGTTATTGAGGCGAACCGGGGGAACTGAA                       <  1:1254317/51‑1
                                                                        ACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGG    >  1:501820/1‑70
                                                                        ACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGG    >  1:3206297/1‑70
                                                                        ACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGG    >  1:3210271/1‑70
                                                                        ACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAA                       <  1:62293/51‑1
                                                                        ACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAA                       <  1:2823410/51‑1
                                                                         CTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAA  <  1:89690/71‑1
                                                                         CTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAA                            >  1:1198042/1‑45
                                                                         CTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGG                              <  1:2793674/43‑1
                                                                         CTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGG                              <  1:3435814/43‑1
                                                                         CTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGG                                <  1:158956/41‑1
                                                                          TATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGA                        <  1:201512/48‑1
                                                                                                                                                
CTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Exported/204788‑204714
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acacactATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAA  >  Exported/204732‑204800

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.