| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 778349 = | 62 (1.160) | 15 (0.340) | 4/82 | NT | 25.2% | intergenic (‑55/‑465) | minC/ycgJ | cell division inhibitor/hypothetical protein |
| ? | Exported | 778373 = | 38 (0.860) | intergenic (‑79/‑441) | minC/ycgJ | cell division inhibitor/hypothetical protein | |||||
ACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATG > Exported/778304‑778436 | aCTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTg < 1:2252820/70‑1 (MQ=255) aaTTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATta < 1:867912/71‑1 (MQ=255) aaTTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATta < 1:3354414/71‑1 (MQ=255) aaTTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATta < 1:384727/71‑1 (MQ=255) gCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTg < 1:1826347/71‑1 (MQ=255) ttAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGc < 1:1090920/71‑1 (MQ=255) ttAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGc < 1:1501533/71‑1 (MQ=255) aaTCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGc > 1:2435918/1‑69 (MQ=255) atcatcGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAg < 1:2979061/71‑1 (MQ=255) atcGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTg < 1:1260923/61‑1 (MQ=255) atcGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTg < 1:2182480/61‑1 (MQ=255) atcGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTc < 1:2680648/70‑1 (MQ=255) atcGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTc < 1:2189322/70‑1 (MQ=255) atcGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTc < 1:584879/70‑1 (MQ=255) atcGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTc < 1:1252010/70‑1 (MQ=255) atcGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTc < 1:2950967/70‑1 (MQ=255) tcGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCa < 1:1749132/65‑1 (MQ=255) gCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAg > 1:2151105/1‑65 (MQ=255) gcgcgATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATAtt < 1:111809/51‑1 (MQ=255) gcgcgATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATAtt < 1:1777625/51‑1 (MQ=255) gcgATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCAttt < 1:2840675/71‑1 (MQ=255) gcgATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCAttt < 1:198707/71‑1 (MQ=255) gatgatGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTAt > 1:288992/1‑71 (MQ=255) atgatgTTCCGAAGACTATAAGGCATGTTATAGTCTGGAt < 1:1803287/40‑1 (MQ=255) atgatgTTCCGAAGACTATAAGGCATGTTATAGTCTGGAt < 1:1813956/40‑1 (MQ=255) atgatgTTCCGAAGACTATAAGGCATGTTATAGTCTGGAt < 1:1903459/40‑1 (MQ=255) atgatgTTCCGAAGACTATAAGGCATGTTATAGTCTGGAt < 1:126665/40‑1 (MQ=255) atgatgTTCCGAAGACTATAAGGCATGTTATAGTCTGGAt < 1:1589864/40‑1 (MQ=255) atgatgTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTAtt > 1:2681231/1‑71 (MQ=255) atgatgTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTAtt > 1:2005015/1‑71 (MQ=255) tgatgTTCCGAAGACTATAAGGCATGTTATAGTCTGGAt < 1:1781988/39‑1 (MQ=255) tgatgTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTAtt > 1:689012/1‑70 (MQ=255) atgTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCAcc > 1:2294679/1‑56 (MQ=255) atgTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTAtt > 1:1660494/1‑68 (MQ=255) tCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGt > 1:3332437/1‑70 (MQ=255) ccGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTccc > 1:1181511/1‑56 (MQ=255) ccGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCa > 1:3431973/1‑65 (MQ=255) ccGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCa > 1:1512723/1‑65 (MQ=255) cGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTaaa < 1:529229/71‑1 (MQ=255) cGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTaa < 1:1953647/70‑1 (MQ=255) cGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTaa < 1:1234785/70‑1 (MQ=255) gAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTaaaa < 1:148974/71‑1 (MQ=255) gAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTaaaa < 1:3458643/71‑1 (MQ=255) aaGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCa < 1:3033743/62‑1 (MQ=255) aaGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCa < 1:2449598/62‑1 (MQ=255) agactataacatgccttatagtctGGATTATATTGAGGCAAGt < 1:3121567‑M2/19‑1 (MQ=255) agactataacatgccttatagtctGGATTATATTGAGGCAAGt < 1:2356600‑M2/19‑1 (MQ=255) agactataacatgccttatagtctGGATTATATTGAGGCAAGt < 1:3442728‑M2/19‑1 (MQ=255) agactataacatgccttatagtctGGATTATATTGAGGCAAGt < 1:2468104‑M2/19‑1 (MQ=255) agactataacatgccttatagtctGGATTATATTGAGGCAAGt < 1:1659852‑M2/19‑1 (MQ=255) GACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTc > 1:905723‑M1/1‑71 (MQ=255) GACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTc > 1:2443270‑M1/1‑71 (MQ=255) GACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTc > 1:3350252‑M1/1‑71 (MQ=255) actataacatgccttatagtctGGATTATATTGAGGCAAGt < 1:25929‑M2/19‑1 (MQ=255) actataacatgccttatagtctGGATTATATTGAGGCAAGt < 1:287825‑M2/19‑1 (MQ=255) actataacatgccttatagtctGGATTATATTGAGGCAAGt < 1:1554023‑M2/19‑1 (MQ=255) actataacatgccttatagtctGGATTATATTGAGGCAAGt < 1:3250128‑M2/19‑1 (MQ=255) tataacatgccttatagtctGGATTATATTGAGGCAAGTCa > 1:115976‑M2/21‑41 (MQ=255) taacatgccttatagtctGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTc < 1:187509‑M2/53‑1 (MQ=255) taacatgccttatagtctGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTc < 1:3082734‑M2/53‑1 (MQ=255) TAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTc < 1:3217387‑M1/71‑1 (MQ=255) TAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTc < 1:276946‑M1/71‑1 (MQ=255) AGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTg > 1:2010391‑M1/1‑71 (MQ=255) catgccttatagtctGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTaaa > 1:2188394‑M2/16‑59 (MQ=255) catgccttatagtctGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTaaa > 1:1211711‑M2/16‑59 (MQ=255) catgccttatagtctGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTaaa > 1:149662‑M2/16‑59 (MQ=255) tGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTAtt < 1:3179834/46‑1 (MQ=255) tGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTAtt < 1:2926433/46‑1 (MQ=255) tGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTAtt < 1:2117897/46‑1 (MQ=255) ttatagtctGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTaa < 1:2377161‑M2/43‑1 (MQ=255) ttatagtctGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTaa < 1:2721756‑M2/43‑1 (MQ=255) ttatagtctGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATaaa < 1:2341710‑M2/62‑1 (MQ=255) ttatagtctGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATaaa < 1:1748135‑M2/62‑1 (MQ=255) ttatagtctGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATaaa < 1:521246‑M2/62‑1 (MQ=255) ttatagtctGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATaaa < 1:28721‑M2/62‑1 (MQ=255) tatagtctGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCTGAGTAAAAGTCTATTCTGTGATaaa < 1:2884387‑M2/62‑1 (MQ=255) atagtctGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAAt > 1:3262443‑M2/8‑70 (MQ=255) atagtctGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAAt < 1:3101800‑M2/63‑1 (MQ=255) atagtctGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATg > 1:1711000‑M2/8‑71 (MQ=255) | ACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATG > Exported/778304‑778436 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |