| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1908195 | 65 (1.210) | 4 (0.080) | 3/92 | NT | 5.4% | coding (1271/3369 nt) | recC | exonuclease V (RecBCD complex), gamma chain |
| ? | Exported | = 1908209 | 79 (1.600) | coding (1257/3369 nt) | recC | exonuclease V (RecBCD complex), gamma chain | |||||
GACGGTCGGAAATGGCGTAAGGTAGGTAACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGTAAGTGTCGGGTCTTCCTC > Exported/1908139‑1908274 | gacgGTCGGAAATGGCGTAAGGTAGGTAACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGa > 1:47465/1‑71 (MQ=255) aCGGTCGGAAATGGCGTAAGGTAGGTAACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGAc > 1:2427118‑M2/1‑70 (MQ=255) tCGGAAATGGCGTAAGGTAGGTAACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTa < 1:2101845/71‑1 (MQ=255) gAAATGGCGTAAGGTAGGTAACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCt > 1:1084849/1‑71 (MQ=255) aaTGGCGTAAGGTAGGTAACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGt < 1:2937676/71‑1 (MQ=255) ggCGTAAGGTAGGTAACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGa > 1:946283/1‑71 (MQ=255) gCGTAAGGTAGGTAACGATCCGCAGGTGCGCTACCAAACACATCCTGAATAAACGGACTGTAGCTGTCGa < 1:3368377/70‑1 (MQ=255) gCGTAAGGTAGGTAACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGat < 1:2479650/71‑1 (MQ=255) gCGTAAGGTAGGTAACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGat < 1:178407/71‑1 (MQ=255) gCGTAAGGTAGGTAACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGat < 1:1598368/71‑1 (MQ=255) gCGTAAGGTAGGTAACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGa < 1:3208761/70‑1 (MQ=255) cGTAAGGTAGGTAACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGata < 1:1278604/71‑1 (MQ=255) aggtaggtAACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAg > 1:1990989/1‑71 (MQ=255) aggtaggtAACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAg < 1:1797665/71‑1 (MQ=255) ggtaggtaACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGc > 1:2157227/1‑71 (MQ=255) ggtaggtaACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGc > 1:1889518/1‑71 (MQ=255) ggtaggtaACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGc > 1:3326668/1‑71 (MQ=255) aggtaACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAg > 1:3357436/1‑67 (MQ=255) aggtaACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGccac > 1:2084593/1‑71 (MQ=255) ggtaACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGccac > 1:183855/1‑70 (MQ=255) gtaACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGccacca > 1:2362952/1‑71 (MQ=255) gtaACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGccacc < 1:1663475/70‑1 (MQ=255) gtaACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGccacc < 1:2337665/70‑1 (MQ=255) gtaACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGccacc < 1:3070112/70‑1 (MQ=255) gtaACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGccacc < 1:295738/70‑1 (MQ=255) aaCGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCAt > 1:1073017/1‑70 (MQ=255) aaCGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCAt > 1:2523670/1‑70 (MQ=255) aaCGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCAt > 1:259292/1‑70 (MQ=255) aCGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATc < 1:1383594/70‑1 (MQ=255) aCGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCa > 1:1942402/1‑71 (MQ=255) aCGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCa > 1:3051139/1‑71 (MQ=255) aCGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCa < 1:1999968/71‑1 (MQ=255) cGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCAc < 1:2341125/71‑1 (MQ=255) tCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACgat < 1:1236879/71‑1 (MQ=255) tCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACgat < 1:3001672/71‑1 (MQ=255) tCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACgat < 1:3191076/71‑1 (MQ=255) tCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACgat < 1:2193180/71‑1 (MQ=255) cGCAGGTGCGCTACCAAACATAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACgatg < 1:1684270/70‑1 (MQ=255) cGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACgatg < 1:1383355/70‑1 (MQ=255) aGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGatgatg < 1:1896600/70‑1 (MQ=255) ggTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTc < 1:1997785/44‑1 (MQ=255) ggTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTc < 1:2526765/44‑1 (MQ=255) ggTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTc < 1:1761488/44‑1 (MQ=255) tGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTcgc < 1:3308455/71‑1 (MQ=255) gcTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGa < 1:78098/41‑1 (MQ=255) gcTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGa < 1:1822485/41‑1 (MQ=255) gcTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGa < 1:168624/41‑1 (MQ=255) gcTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTcgcgcg < 1:882660/71‑1 (MQ=255) tACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGata > 1:2734008/1‑41 (MQ=255) aCCAAACACAGCCTGAATAAACGGACTGTAGCTGTc < 1:3370485/36‑1 (MQ=255) aCCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATc < 1:1977531/52‑1 (MQ=255) ccAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAg > 1:519771/1‑70 (MQ=255) ccAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGt < 1:1469671/71‑1 (MQ=255) ccAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGt < 1:549148/71‑1 (MQ=255) ccAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGt < 1:2988819/71‑1 (MQ=255) cAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCa < 1:3247028/51‑1 (MQ=255) cAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGTa < 1:2401075/71‑1 (MQ=255) cAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGTa < 1:1573563/71‑1 (MQ=255) aaaCACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACgat < 1:38585/54‑1 (MQ=255) aaaCACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTc < 1:1507096/60‑1 (MQ=255) aaaCACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGt > 1:54014/1‑69 (MQ=255) aaCACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGTAAg > 1:2625895/1‑71 (MQ=255) cacaGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACGATCACg > 1:2249441/1‑49 (MQ=255) cacaGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGTAAgtg < 1:3158893/71‑1 (MQ=255) acaGCCTGAATAAACGGActgtgtttggtagcgcacctg > 1:1708430‑M2/1‑18 (MQ=255) acaGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGTAAgtgt > 1:1549208/1‑71 (MQ=255) acaGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGTAAgtgt > 1:2357978/1‑71 (MQ=255) caGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGTAAGTGTc < 1:2836574/71‑1 (MQ=255) caGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGTAAGTGTc < 1:938024/71‑1 (MQ=255) caGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGTAAGTGTc < 1:1730819/71‑1 (MQ=255) caGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGTAAGTGTc < 1:3220131/71‑1 (MQ=255) caGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGTAAGTGTc < 1:2796013/71‑1 (MQ=255) aGCCTGAATAAACGGActgtgtttggtagcgcacctgcg < 1:341403‑M2/39‑24 (MQ=255) aGCCTGAATAAACGGActgtgtttggtagcgcacctgcg < 1:1562631‑M2/39‑24 (MQ=255) gacTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACgat > 1:2379077/3‑47 (MQ=255) ccTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGTAAGTGTCggg < 1:1161021/71‑1 (MQ=255) ccTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGTAAGTGTCggg < 1:1783354/71‑1 (MQ=255) tGAATAAACGGActgtgtttggtagcgcacctgcggatcgttacctaccttacgccatttccgaccgtcgt < 1:2577975‑M2/71‑60 (MQ=255) aaTAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGTAAGTGTCGGGTCt > 1:1754477/1‑70 (MQ=255) tAAACGGACTGTAGCTGTCGATATCAGCCACCATCACgatg < 1:471576/41‑1 (MQ=255) tAAACGGACTGTAGCTGTCGATATCAGCCACCATCACgatg < 1:85345/41‑1 (MQ=255) tAAACGGACTGTAGCTGTCGATATCAGCCACCATCACgatg < 1:3183828/41‑1 (MQ=255) tAAACGGACTGTAGCTGTCGATATCAGCCACCATCACgatg < 1:2016992/41‑1 (MQ=255) tAAACGGACTGTAGCTGTCGATATCAGCCACCATCACga > 1:3312472/1‑39 (MQ=255) tAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGa > 1:1548211/1‑53 (MQ=255) tAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGa > 1:2696924/1‑53 (MQ=255) tAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGTAAGTGTCGGGTc > 1:1253101/1‑67 (MQ=255) cGGACTGTAGCTGTCGATATCAGCCACCATCACGatgatg < 1:2423929/40‑1 (MQ=255) cGGACTGTAGCTGTCGATATCAGCCACCATCACGatgatg < 1:66872/40‑1 (MQ=255) cGGACTGTAGCTGTCGATATCAGCCACCATCACGatgatg < 1:663347/40‑1 (MQ=255) cGGACTGTAGCTGTCGATATCAGCCACCATCACGatgatg < 1:618969/40‑1 (MQ=255) cGGACTGTAGCTGTCGATATCAGCCACCATCACGatgatg < 1:1743123/40‑1 (MQ=255) cGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGTAAGTGTCGGGTCTtcctc > 1:992108/1‑69 (MQ=255) | GACGGTCGGAAATGGCGTAAGGTAGGTAACGATCCGCAGGTGCGCTACCAAACACAGCCTGAATAAACGGACTGTAGCTGTCGATATCAGCCACCATCACGATGATGTCGCGCGGAGTAAGTGTCGGGTCTTCCTC > Exported/1908139‑1908274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |