| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 434,334 | G→A | 5.5% | G27S (GGC→AGC) | pbtP → | petrobactin iron‑siderophore ABC transporter (ATP‑binding protein) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 434,334 | 0 | G | A | 5.5% | 234.0 / 3.0 | 72 | G27S (GGC→AGC) | pbtP | petrobactin iron‑siderophore ABC transporter (ATP‑binding protein) |
| Reads supporting (aligned to +/- strand): ref base G (33/35); new base A (2/2); total (35/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.21e-01 | |||||||||||
ATTAATTTTGCCGGCGGGATTTATTTTATCTACTTGCTGTTAAAGGAGAATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACAAGAGATTGGAGCATGTGACAGCA > BS168_reference_genome/434200‑434466 | attaATTTTGCCGGCGGGATTTATTTTATCTACTTGCTGTTAAAGGAGAATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCa < 4:367398/138‑1 (MQ=255) ttaATTTTGCCGGCGGGATTTATTTTATCTACTTGCTGTTTAAGGAGAATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCTCGATTGAAAAGGGCaa > 3:229779/1‑138 (MQ=255) tGCCGGCGGGATTTATTTTATCTACTTGCTGTTAAAGGAGAATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCAcc < 7:113728/138‑1 (MQ=255) gCCGGCGGGATTTATTTTATCTACTTGCTGTTAAAGGAGAATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTc > 1:364275/1‑139 (MQ=255) atCTACTTGCTGTTAAAGGAGAATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGCTCCTAACgg > 1:42003/1‑139 (MQ=255) atCTACTTGCTGTTAAAGGAGAATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAAACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACgg > 4:311419/1‑139 (MQ=255) tCTACTTGCTGTTAAAGGAGAATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGgc > 1:292428/1‑139 (MQ=255) tCTACTTGCTGTTAAAGGAGAATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGgc > 1:56002/1‑139 (MQ=255) cTTGCTGTTACAGGAGAATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGCAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGgc < 3:349646/135‑1 (MQ=255) cTTGCTGTTAAAGGAGAATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGGCCTAACGgc < 5:177950/135‑1 (MQ=255) gcggTTAAAGGAGAATAAATCATGTTAGATTTCAGAAATGCAAGCAAACAATATGGCGTGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTCACGGCGCCgg < 6:90887/134‑1 (MQ=255) ttAAAGGAGAATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAg > 5:113321/1‑139 (MQ=255) aaGGAGAATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTa < 2:18040/138‑1 (MQ=255) aGGAGAATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACg < 7:239127/139‑1 (MQ=255) gagaATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGGCACGATTCAAAAGGGCAAAATCACCTCGTTTTTCGGTCCTAACGGCGCCGGCAAAAGTACgct < 8:382964/139‑1 (MQ=255) agaATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACgctg < 1:245819/139‑1 (MQ=255) gaATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTAt > 6:214066/1‑107 (MQ=255) gaATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTAt < 5:214066/107‑1 (MQ=255) gaATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACgctgc < 8:80241/139‑1 (MQ=255) gaATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAAACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACgctgc < 3:311419/139‑1 (MQ=255) aaTAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACgctgct < 4:330013/139‑1 (MQ=255) aTAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGACAAAAGTACGctgctg > 2:397546/1‑139 (MQ=255) aTAAATCATGGTAGAGCTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGCCGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACgctgcac > 4:353156/1‑137 (MQ=255) tAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGt < 7:310896/139‑1 (MQ=255) tAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGt < 7:164810/139‑1 (MQ=255) tAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGACAAAAGTACGCTGCTGt < 1:397546/139‑1 (MQ=255) tCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTAt < 6:237121/139‑1 (MQ=255) cATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTAt > 4:313621/1‑138 (MQ=255) ggTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCAt > 5:312538/1‑138 (MQ=255) ggTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCAt > 3:202088/1‑138 (MQ=255) ggTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCAATCAt > 7:112063/1‑138 (MQ=255) agGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAACAGGGCAAAATCACCTCGTTTTTCGGTCCTCACGGCGCCGGCAAAAGTTCGCTGCTGGCTATCATGCgccg > 8:405391/1‑139 (MQ=255) gTCAGAAATGTAAGCAAACAATATGGCTGGAAAGTTGTTCTTTAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAgccgc < 2:400114/138‑1 (MQ=255) aaaTGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATc < 2:292428/139‑1 (MQ=255) tAAGCTAACAATATGGCGGGAAAGGTGTTCTTGAAGAGACGTCAGTCACCATTCAAAAGGTCAAAATCAGCTCGGTTATCGGTCCAAACGGCGCCCGCAAAAGAGGGCTGCTGTCTATCATGAGCCGCCTGATCatt > 8:187727/1‑135 (MQ=255) tAAGCAAACAATATGGCGGGAAAGTTGTTCTGGAAGAGACGTCAGTCTCGATTCAAAAGGGCAAAATCCCCTCGTTTATCGGACCTAACGGCGCCGGCAAAAGTACGCTGCTGTGTATCATGTGCCGGCTGAGCaaa > 8:187729/1‑137 (MQ=255) gCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACgctg < 7:236970/107‑1 (MQ=255) gCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACgctg > 8:236970/1‑107 (MQ=255) atttGGCTGTAATGTGGTTCTTTATGAGACGGCCGACACGATTCAAAAGGGCAAAATGACCTCTTTTTTCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGc < 4:212063/136‑1 (MQ=255) atatGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGc < 2:364275/139‑1 (MQ=255) ggCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGc > 6:194049/1‑135 (MQ=255) ggCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGc > 8:40619/1‑135 (MQ=255) gCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGt < 6:217131/99‑1 (MQ=255) gCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGt > 5:217131/1‑99 (MQ=255) ggAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTa > 2:88126/1‑139 (MQ=255) gAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTa > 5:247094/1‑138 (MQ=255) gAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTa > 4:285865/1‑138 (MQ=255) gAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTa > 7:209037/1‑138 (MQ=255) gAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTACTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATTAGCCGCCGGATCAAAAAGGATTCCGGCGAGATTTa > 3:212063/1‑138 (MQ=255) gAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACAGCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATTCGCCGCCTGATCAAAAAGGATTACGGCGAGATTTa > 5:290561/1‑138 (MQ=255) aaGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAACCTCACCTCGTTTATCGGTCCTCACGGCGCAGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAACGATTCCGGCGAGATTTACAt < 2:32310/139‑1 (MQ=255) aaGTTGTACTTGAAGAGACGTCAGTCACGAATCAAAAGGGCAAAATCACCACGTTTATCGGTCATAACGCCGCCGCCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAACGATTCCGGCGAGATTTACa > 8:2774/1‑138 (MQ=255) gttgttCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAg < 6:113321/139‑1 (MQ=255) gttgttCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAg < 4:202088/139‑1 (MQ=255) ttCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAGACg < 4:34718/138‑1 (MQ=255) gacgagaCGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACa < 2:56002/134‑1 (MQ=255) gAAGAGACGTCAGTCACGATTCAAAAGGGCATAATCACCTCGTTTATCGGTCCTAAGGTCGCCGGCAAATGTACGCTGCTGTCTATCATGAGCCGCCTTATCAAAAAGGATTCCTGCGAGATTTACATAGACGGACa < 7:2774/137‑1 (MQ=255) gAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACa < 3:56027/137‑1 (MQ=255) gAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACa < 7:40619/137‑1 (MQ=255) gAAGAGACGTCAGTCACGATTCAAAACGGCAAAATCACCTCGTTTATCGGTCCAAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACaa < 6:43441/138‑1 (MQ=255) gaCGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACAAGAGAtt > 2:109210/1‑139 (MQ=255) tcagtcaCGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACAAGAGATTGGAg < 8:101735/139‑1 (MQ=255) cGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGGAACAAAAGCCATCCGGCGAGATTTACATAGACGAGCAAGAGAATGGAGCAagtgc > 2:208629/1‑138 (MQ=255) cGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACAAGAGATTGGAGCATGTGa < 1:88126/139‑1 (MQ=255) aaaGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACAAGAGATTGGAGCAtg < 3:191578/129‑1 (MQ=255) aaaGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACAAGAGATTGGAGCAtg > 4:191578/1‑129 (MQ=255) aaaGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACAAGAGATTGGAGCATGTGACAGCa > 2:193465/1‑137 (MQ=255) aaaGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACAAGAGATTGGAGCATGTGACAGCa > 8:40520/1‑137 (MQ=255) aaaGAGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACAAGAGAt < 2:17172/120‑1 (MQ=255) aaaGAGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACAAGAGAt < 2:23528/120‑1 (MQ=255) aaaGAGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACAAGAGAt > 1:23528/1‑120 (MQ=255) aaaGAGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGACGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACAAGAGAt > 1:17172/1‑120 (MQ=255) ggCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACg > 4:233157/1‑48 (MQ=255) ggCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACg < 3:233157/48‑1 (MQ=255) | ATTAATTTTGCCGGCGGGATTTATTTTATCTACTTGCTGTTAAAGGAGAATAAATCATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTGATCAAAAAGGATTCCGGCGAGATTTACATAGACGGACAAGAGATTGGAGCATGTGACAGCA > BS168_reference_genome/434200‑434466 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |