| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 1,944,411 | A→G | 5.1% | I415T (ATT→ACT) | xynD ← | arabinoxylan arabinofuranohydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 1,944,411 | 0 | A | G | 5.1% | 243.8 / 3.8 | 79 | I415T (ATT→ACT) | xynD | arabinoxylan arabinofuranohydrolase |
| Reads supporting (aligned to +/- strand): ref base A (40/35); new base G (2/2); total (42/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.46e-01 | |||||||||||
CCAACAAGCTTACCGTCTGCACTGTCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTTATATGGGTTTAAATTGGAAATTTGTGTTACACCTGCA > BS168_reference_genome/1944273‑1944548 | ccAACAAGCTTACCGTCTGCACTGTCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGaa > 4:150852/1‑139 (MQ=255)ccAACAAGCTTACCGTCTGCACTGTCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGaa > 2:25285/1‑139 (MQ=255) acaaGCTTACCGTCTGCACTGTCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGc < 3:150852/139‑1 (MQ=255) acaaGCTTACCGTCTGCACTGTCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGc > 2:238041/1‑139 (MQ=255) acaaGCTTACCGTCTGCACTGTCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGc < 4:38350/139‑1 (MQ=255) cTTACCGTCTGCACTGTCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGt > 3:345322/1‑138 (MQ=255) cTTACCGTCTGCACTGTCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGt > 2:122032/1‑138 (MQ=255) aCCGTCTGCACTGTCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGCCCTGGCACCGCCCGCTCCGACGTCTGCATTTCCTACCGCAATCCAGTCTCCCTTTTGAATGCTTGTTACa > 6:222155/1‑139 (MQ=255) aCCGTCTGCACTGTCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACa > 2:8364/1‑139 (MQ=255) gTCTGCACTGTCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGc < 8:273183/139‑1 (MQ=255) gTCTGCACTGTCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGc < 6:42482/139‑1 (MQ=255) tCTGCACTGTCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCt > 7:387809/1‑139 (MQ=255) tGCACTGTCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTTCATGCTGa > 3:355691/1‑139 (MQ=255) gTCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTTCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCGCCATTTTTAATTCTTTTTACATTCTGattatt > 6:11296/1‑138 (MQ=255) gTCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGattatt > 2:287082/1‑138 (MQ=255) tCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGc > 3:308631/1‑118 (MQ=255) tCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGc < 4:308631/118‑1 (MQ=255) gcgcACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGc < 1:8364/139‑1 (MQ=255) gcgcACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGc > 5:203108/1‑139 (MQ=255) gcgcACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGAGGATTATTTACTGGc > 2:332823/1‑139 (MQ=255) cTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCccgcc > 1:223152/1‑139 (MQ=255) cTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCccgcc < 8:387809/139‑1 (MQ=255) ttttCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATTCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGc > 2:127279/1‑139 (MQ=255) ttttCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTg < 7:277867/138‑1 (MQ=255) ttCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCt < 3:131822/138‑1 (MQ=255) ccGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACATCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTgg > 2:11392/1‑139 (MQ=255) ccGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTgg > 1:377633/1‑139 (MQ=255) gATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTc > 1:289732/1‑138 (MQ=255) tGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCaa > 3:156941/1‑138 (MQ=255) cTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCaaaa < 2:289732/138‑1 (MQ=255) aCATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGc < 3:47968/79‑1 (MQ=255) aCATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGc > 4:47968/1‑79 (MQ=255) aTTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGt < 6:167476/139‑1 (MQ=255) ttGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTc > 6:84461/1‑138 (MQ=255) gCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTtct < 6:265319/121‑1 (MQ=255) gCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTtct > 5:258273/1‑121 (MQ=255) gCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTtct < 6:258273/121‑1 (MQ=255) gCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTtct > 5:265319/1‑121 (MQ=255) gCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCAt > 7:283739/1‑139 (MQ=255) tAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTcc < 5:401609/138‑1 (MQ=255) aaaTGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTcc > 3:1063/1‑137 (MQ=255) ccTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAAc > 1:296920/1‑139 (MQ=255) ccTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTAAGAATGCTTCTTACATGCTGATTTGTTACTGGCCCGCCGGGTGCTGAGGCCTTCTCTGTCAAAATGCGACCATTCCAAGCAAAc > 8:40231/1‑139 (MQ=255) gCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGc > 4:199106/1‑58 (MQ=255) gCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGc < 3:199106/58‑1 (MQ=255) gCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGttt < 6:188963/139‑1 (MQ=255) gCACCGCCAGCGCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGttt < 6:263343/139‑1 (MQ=255) cccgcTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAGTGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTg < 6:57768/88‑1 (MQ=255) cccgcTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAGTGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTg < 6:63049/88‑1 (MQ=255) cccgcTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAGTGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTg > 5:63049/1‑88 (MQ=255) cccgcTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAGTGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTg > 5:57768/1‑88 (MQ=255) cccgcTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCtt > 4:134269/1‑139 (MQ=255) cccgcTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCtt > 1:153556/1‑139 (MQ=255) cccgcTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCt > 8:75159/1‑138 (MQ=255) cccgcTCCGAAGTCTGCATTTCCTACAGCAATCCAGACTCCATTTTGAATGCTTGTTACATGCTGATTATTTAATGGCCCGCCGGGTGCTGTGGCCTTCTCTGTAAAAATGCGTCCATTCCAAGCACACGTTTCAGCt > 5:263343/1‑138 (MQ=255) gcTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTa < 1:287082/139‑1 (MQ=255) cTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTGAGCTTCTAc > 1:357301/1‑139 (MQ=255) cTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTAc < 6:116219/139‑1 (MQ=255) cTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTAc > 1:343486/1‑139 (MQ=255) cGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTAcc < 3:134269/137‑1 (MQ=255) cGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCg < 8:322757/139‑1 (MQ=255) tGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCTGTTatat > 2:223911/1‑139 (MQ=255) tGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTTatat > 8:55345/1‑139 (MQ=255) tGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTTatat > 2:300466/1‑139 (MQ=255) tGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGAGTATTTACTGGCCCGCCGGGTGCTGTGGAGTTCTCTGGCAAAATGCGTCCATTCAACGCAACCGTTTCGGCTTCTACCCGGTTatat > 1:398251/1‑139 (MQ=255) gCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTTATATg > 2:780/1‑139 (MQ=255) cATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTtata < 1:238041/136‑1 (MQ=255) cATCTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTtata < 6:83809/136‑1 (MQ=255) aGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTTATATGGGTTTAAATTg < 1:25285/139‑1 (MQ=255) cAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTTATATGGGTTTGAATTGGa < 6:203108/139‑1 (MQ=255) tCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTtct > 5:146102/1‑69 (MQ=255) tCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTtct < 6:146102/69‑1 (MQ=255) tCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTTATATGGGTTTAAATTGGAAAt < 7:175528/139‑1 (MQ=255) tCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTTATATGGGTTTAAATTGGAAAt < 1:122032/139‑1 (MQ=255) cAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTTATATGGGTTTAAATTGGAAAtt < 7:75159/138‑1 (MQ=255) tctcCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTTATATGGGTTTAAATTGGAAATTtgtg > 3:386329/1‑139 (MQ=255) ctcCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTTATATGGGTTTAAATTGGAAATTTgtgt < 1:11392/139‑1 (MQ=255) ctcCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTTATATGGGTTTAAATTGGAAATTTgtgt < 1:300466/139‑1 (MQ=255) ccATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTTATATGGGTTTAAATTGGAAATTTGTGTTa < 1:301242/139‑1 (MQ=255) aTTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTTATATGGGTTTAAATTGGAAATTTGTGTTaca < 7:55345/139‑1 (MQ=255) ttttGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTTATATGGGTTTAAATTGGAAATTTGTGTTacac < 5:37320/139‑1 (MQ=255) aaTGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGGCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTTATATGGGTTTAAATTGGAAATTTGTGTTACACCTGCa < 1:33691/139‑1 (MQ=255) aTGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGttt > 8:215370/1‑85 (MQ=255) aTGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGttt < 7:215370/85‑1 (MQ=255) | CCAACAAGCTTACCGTCTGCACTGTCGAGGCGCACTTCTATTTTCCCGCCTAAAGTGGATGCTACATTTGCTTTAAATGACCTGGCACCGCCCGCTCCGAAGTCTGCATTTCCTACAGCAATCCAGTCTCCATTTTGAATGCTTGTTACATGCTGATTATTTACTGGCCCGCCGGGTGCTGTGGACTTCTCTGTCAAAATGCGTCCATTCCAAGCAAACGTTTCAGCTTCTACCCGGTTATATGGGTTTAAATTGGAAATTTGTGTTACACCTGCA > BS168_reference_genome/1944273‑1944548 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |