| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 2,908,248 | C→A | 5.4% | A164S (GCT→TCT) | sdhC ← | succinate dehydrogenase (cytochrome b558 subunit) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 2,908,248 | 0 | C | A | 5.4% | 244.7 / 3.9 | 74 | A164S (GCT→TCT) | sdhC | succinate dehydrogenase (cytochrome b558 subunit) |
| Reads supporting (aligned to +/- strand): ref base C (41/29); new base A (2/2); total (43/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.49e-01 | |||||||||||
TAGTAATCTAGTACTCTTAAACAAATGCAAAAATCGCTTTTAAGCCTACGTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGTCGAAATTGACCTCAGCACCCATTTGTGCGGCAATGCG > BS168_reference_genome/2908113‑2908386 | tAGTAATCTAGTACTCTTAAACAAATGCAAAAATCGCTTTTAAGCCTACGTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGa > 5:61755/1‑138 (MQ=255) gTAATCTAGTACTCTTAAACAAATGCAAAAATCGCTTTTAAGCCTACGTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGaaa < 1:81017/138‑1 (MQ=255) gTAATCTAGTACTCTTAAACAAATGCAAAAATCGCTTTTAAGCCTACGTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGaa < 3:383526/137‑1 (MQ=255) gTACTCTTAAACAAATGCAAAAATCGCTTTTAAGCCTACGTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGaa < 4:11858/129‑1 (MQ=255) gTACTCTTAAACAAATGCAAAAATCGCTTTTAAGCCTACGTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGaa > 3:11858/1‑129 (MQ=255) gTACTCTTAAACAAATGCAAAAATCGCTTTTAAGCCTACGTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATaaa > 8:33221/1‑139 (MQ=255) gTACTCTTAAACAAATGCAAAAATCGCTTTTAAGCCTACGTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATaaa > 6:317026/1‑139 (MQ=255) ctctTAAACAAATGCAAAAATCGCTTTTAAGCCTACGTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAAc > 8:126280/1‑137 (MQ=255) ctctTAAACAAATGCAAAAATCGCTTTTAAGCCTACGTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAAc < 7:126280/137‑1 (MQ=255) aaCAAATTCAAAAATCGCTTTTAAGCCTACGTAAGACAGTGCAACAATAATAATCAGCGTAACGTTTGTCGAAATTCTTTGAGAACGATGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAATCCGTTCgag < 4:86260/139‑1 (MQ=255) aaCAAATGCAAAAATCGCTTTTAAGCCTACGTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCgag < 4:123699/139‑1 (MQ=255) attaaaaaaTCGCTTTTAAGCCTACGTATGACACTGCATAAAAAATAATCAGCGTAACGTATTTCGAAATTCTATGAGAACGAGGCGTAACCGTGATGCCGCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAgag > 2:46716/5‑137 (MQ=255) aTGCAAAAATCGCTTTTAAGCCTACGTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTg > 7:163410/1‑139 (MQ=255) aTGCAAAAATCGCTTTTAAGCCTACGTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTg > 2:282684/1‑139 (MQ=255) aTGCAAAAATCGCTTTTAAGCCTACGTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGACCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTg > 5:293717/1‑139 (MQ=255) aCGTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGCCCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGa > 1:112241/1‑139 (MQ=255) cGTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCTAAAGACAATAAACCGATCGAGAAGTGGAAAATTGTTGATAAAACACCGAc < 1:33596/139‑1 (MQ=255) attATGAAAGTTCAACAAAAATAATAAGCGTATCTTATTTAGAAATTATTTTTGTTCGATGCGTTACCGTGATTCACAATGTAACAGCTAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACAGCGAc < 2:154595/137‑1 (MQ=255) gTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACa < 6:401875/139‑1 (MQ=255) gTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCCAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACa < 1:373125/139‑1 (MQ=255) gTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGaaaa < 4:195610/111‑1 (MQ=255) gTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGaaaa > 3:195610/1‑111 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGaa > 1:6147/1‑81 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGaa < 2:6147/81‑1 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGaa > 6:370577/1‑81 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGaa < 3:303315/81‑1 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGaa > 4:303315/1‑81 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGaa < 5:370577/81‑1 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATa > 7:163951/1‑89 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATa < 8:163951/89‑1 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATCAAACCCCGCCAATGTaacaa > 8:15794/1‑139 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTaaaaa > 8:377528/1‑139 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTaaaaa > 5:111712/1‑139 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTaaaaa > 5:321145/1‑139 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTaaaaa > 5:362274/1‑139 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTaaaaa > 7:316852/1‑139 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTaaaaa > 7:220026/1‑139 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTaaaaa > 7:10090/1‑139 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTaaaaa > 1:154595/1‑139 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTaaaaa > 3:382259/1‑139 (MQ=255) tGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGGGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAAGTGTTGATAAAACCACGACAATGGaaaac > 7:407605/1‑138 (MQ=255) tGCAACAAAAATAATCAGAGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAATTTTATGATAAATCACCGACAATGTaaaaa > 2:33596/1‑139 (MQ=255) caacaaAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAAcc > 7:152785/1‑139 (MQ=255) caacaaAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTAACGTGATGCCCTATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAAAGTAAAAAc > 5:149804/1‑138 (MQ=255) aggCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGAGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGga < 5:240753/137‑1 (MQ=255) cGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTTATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGagag > 5:347928/1‑139 (MQ=255) cGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAAATGTTGATAAAACACCGACAATGTAAAAACCAAGCa > 1:329702/1‑128 (MQ=255) cGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGCAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCa < 2:329702/128‑1 (MQ=255) cGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGATCGAGAAGTGGAAAATTGTTGATAAAACACAGACAATGTAAAAACCAAGCATAGCCGga > 1:107588/1‑136 (MQ=255) tcggaTGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCTTTCTAGAAGTGGAAAATTGTTGAAAAAACACCGACAATGTAAAAACCAAGCATAGCAGGAGATCTCa < 6:293717/135‑1 (MQ=255) gTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCAGGAGAGCTCAAAatat > 4:288497/1‑139 (MQ=255) gTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGAGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGga < 1:138237/126‑1 (MQ=255) gTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGAGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGga > 2:138237/1‑126 (MQ=255) gTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGAGAAAGACCATAAACCGTTCGAGAAGTGGAAAAATGTTGTTAAAACACCGACAATGTAAAAACCAAGCATACCCGGAGACCTCAAAat > 6:240753/1‑137 (MQ=255) tCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCgag < 8:276199/64‑1 (MQ=255) tCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCgag > 7:276199/1‑64 (MQ=255) ttGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAg > 5:84214/1‑44 (MQ=255) ttGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAg < 6:84214/44‑1 (MQ=255) gagaACGTGGGGTTACCGTGATGCGCCATGTAACAGCGAAAGACCATAAACCGTTCGAGATGTGGAAAATTGTTGATTAAACACCGTCAATGTAAAAACCAACCATAGCCGGACAGCTCAAAATATTCGCCATCATGt < 1:46716/138‑1 (MQ=255) gagaACGTGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGAACATAAACGGTTCGAGAAGTTGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGt < 6:61755/138‑1 (MQ=255) gagaACGAGGCGTTTCGGTTATGCCCCATGTAACAGCTAAATACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGAATAGCCGGATAGCTCAAAATATTCGCCATCATGt < 2:107588/138‑1 (MQ=255) agaACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGTCg < 6:362274/139‑1 (MQ=255) gAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGTCGAAAtt < 8:316852/139‑1 (MQ=255) cGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGTCGAAATTGACCTCAGCa < 1:282684/139‑1 (MQ=255) aTGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAATTTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGt < 6:250187/118‑1 (MQ=255) aTGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGt > 5:250187/1‑118 (MQ=255) aTGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGTCGAAATTGACCTCa < 4:50802/132‑1 (MQ=255) aTGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGTCGAAATTGACCTCa > 5:47733/1‑132 (MQ=255) aTGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGTCGAAATTGACCTCa < 6:47733/132‑1 (MQ=255) aTGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGTCGAAATTGACCTCa > 3:50802/1‑132 (MQ=255) tGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGTCGAAATTGACCTCAGCACCCAt < 4:382259/139‑1 (MQ=255) cATGTAACAGCTAAAGACCATAAACCGTTCGAGAAGTTGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAAAAATCGCCATCATGTCGAAATTGACCTCAGCACCCATTtgtg > 6:391322/1‑139 (MQ=255) cATGTAACAGCGAAAGACCATTAACCGTTCGAGAAGTGGAAAATTGGTGATAAAACCCCGCCAATGTAAAAACCAAGCCTAGCCGGAGCGCTCTAAATATTCGCCATCATGTCGAAATTGACGTCAGCCCGCATTtgtg > 2:72419/1‑139 (MQ=255) tGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGTCGAAATTGCCCTCAGCACCCATTTGTGCg > 1:17729/1‑139 (MQ=255) cGAAAGACCATATACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGTCGAAATTGACCTCAGCACCCATTTGTGCGGCAATGCg > 1:348494/1‑139 (MQ=255) cGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGTCGAAATTGACCTCAGCACCCATTTGTGCGGCAATg < 3:265507/137‑1 (MQ=255) cGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGTCGAAATTGACCTCAGCACCCATTTGTGCGGCAATg > 4:265507/1‑137 (MQ=255) cGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGTCGAAATTGACCTCAGCACCCATTTGTGCGGCAATGCg > 2:301198/1‑139 (MQ=255) cGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGTCGAAATTGACCTCAGCACCCATTTGTGCGGCAATGCg > 8:74718/1‑139 (MQ=255) | TAGTAATCTAGTACTCTTAAACAAATGCAAAAATCGCTTTTAAGCCTACGTATGACAGTGCAACAAAAATAATCAGCGTAACGTATGTCGAAATTCTTTGAGAACGAGGCGTTACCGTGATGCCCCATGTAACAGCGAAAGACCATAAACCGTTCGAGAAGTGGAAAATTGTTGATAAAACACCGACAATGTAAAAACCAAGCATAGCCGGAGAGCTCAAAATATTCGCCATCATGTCGAAATTGACCTCAGCACCCATTTGTGCGGCAATGCG > BS168_reference_genome/2908113‑2908386 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |