| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 3,031,556 | C→A | 7.8% | intergenic (‑139/‑58) | ezrA ← / → hisK | negative regulator of FtsZ ring formation/histidinol phosphate phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 3,031,556 | 0 | C | A | 7.8% | 223.8 / 2.0 | 88 | intergenic (‑139/‑58) | ezrA/hisK | negative regulator of FtsZ ring formation/histidinol phosphate phosphatase |
| Reads supporting (aligned to +/- strand): ref base C (38/41); new base A (6/3); total (44/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCCCCCTTGCTGTTTACCTTAATCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGACACACTCAGACAATATGCAGAAGA > BS168_reference_genome/3031423‑3031693 | gCCCCCTTGCTGTTTACCTTAATCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTGATTTTTATTATTTTTCCATGTTACAAACATTTTTTGACAAGAAAACaaaaa > 1:131147/1‑139 (MQ=255)gCCCCCTTGCTGTTTACCTTAATCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTTTTATTATGTTAACATGTAAAAAACATTTTTTTTCCAGAAATAaaaa > 1:115654/1‑138 (MQ=255)gCCCCCTTGCTGTTTACCTTAATCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTTTTATTATGATAACATGTAACAAAAATTTTTTGACCAGAATACaaaa > 2:318504/1‑138 (MQ=255)gCCCCCTTGCTGTTTACCTTAATCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTTAACAGAAATCaaaaa > 4:365317/1‑139 (MQ=255)gCCCCCTTGCTGTTTACCTTAATCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCaaaaa > 7:123168/1‑139 (MQ=255)gCCCCCTTGCTGTTTACCTTAATCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTACTTGTTTTTATGATTCCATGTAACAAACATTTTTTGACCCGAAATCaaaaa > 4:398216/1‑139 (MQ=255)gCCCCCTTGCTGTTTACCTTAATCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTAATTGTTTTTTTTTTAAAATGTTAAAAACAATTTTTTTCCAaaaaaaaaaa > 1:168945/1‑138 (MQ=255) ccTTGCTGTTTACCTTAATCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACttt > 6:296108/1‑139 (MQ=255) tttACCTTAATCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTAAGGATATGTATTGAGAAAAACTGTCGTTTTGATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCa > 5:190044/1‑138 (MQ=255) tACCTTAATCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTGAATGTTATTATTATACACTGTAACAAAAAAATTTTTACCAAAAATAAAAAAAAATTTGTGaaaa > 3:124318/1‑138 (MQ=255) tACCTTAATCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTGTTTATATGATACCATGTAAAAAACATTTTTTGACCAGAAATAAAAAACATTTTTTGCaaa > 8:216358/1‑138 (MQ=255) tACCTTAATCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCaaaa > 4:379032/1‑139 (MQ=255) tACCTTAATCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCaaa > 4:391618/1‑138 (MQ=255) tACCTTAATCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTAATTGTTATTTTGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCaaaa > 2:40533/1‑139 (MQ=255) tACCTTAATCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTGTTCATTGTTATTATGCTACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTTTGCaaa > 4:50305/1‑138 (MQ=255) aaTCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTGTTTTTATGATACCATGTAAACAACATTTTTTGAACAGAAATCAAAAACATTTTGTGGAAAATCgg > 8:402882/1‑137 (MQ=255) aaTCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTAAATGTTATTATTATACCATGTAACAAACAATTTTTGACCAGAAATCAAAAACTTTTTGTTCAAAATAgg > 6:128259/1‑137 (MQ=255) tCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTGTTAATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAgg > 1:194458/1‑139 (MQ=255) tCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGAttt > 8:342371/1‑139 (MQ=255) tCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCAATTTTATTATGATACCATGTAACAAACAATTTTTTACCAGAAAAAAAAAACTTTTTTTGCAAAAAAGGCAGGAttt > 7:282292/1‑139 (MQ=255) gggTGTTTTATTTATTCAGAATGATTTAAGGATATGTATTGTTAAAAAGTGTCGTTTTAATTGTTTTTATTATACCATGTAACAAACTTTTTTTGACATGAAATAAAAAATTTTTTTTGCAAAATCGGCAGTATTTGa < 2:176810/138‑1 (MQ=255) ggTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACt < 3:398216/139‑1 (MQ=255) gtgtTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTa < 1:318504/139‑1 (MQ=255) ttatttatTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTAttttt > 4:277353/1‑139 (MQ=255) ttCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATggg < 5:296108/139‑1 (MQ=255) tCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATgggg > 7:139721/1‑139 (MQ=255) aGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACAt < 7:342371/139‑1 (MQ=255) ttCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTTACTATTTTTTCATGGGGTGACATCAAt > 1:120233/1‑139 (MQ=255) ttCAGGATATGTATTGAGAAAAACTGTCGTGTTGATTTTTTTTATTATAACATGTAACAAACAATTTTTTAACAGAAAAAAAAAACATTTTTTTCAAAAACCGCCGGATTTGACTATTTTTTTATTGGGTGACATCaa > 6:266183/1‑138 (MQ=255) atGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGCCCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGc > 3:86245/1‑139 (MQ=255) atGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGc > 1:42792/1‑139 (MQ=255) atGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGc > 7:5661/1‑139 (MQ=255) tGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGc < 2:42792/138‑1 (MQ=255) ttGAGAAAAACTGTCTTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCgaga < 8:282292/138‑1 (MQ=255) ttGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCgaga < 3:277353/138‑1 (MQ=255) ttGAGAAAAACTGGCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCgaga < 2:168945/138‑1 (MQ=255) agaAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCAt > 1:226825/1‑109 (MQ=255) agaAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCAt < 2:221160/109‑1 (MQ=255) agaAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCAt < 2:226825/109‑1 (MQ=255) agaAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCAt > 1:221160/1‑109 (MQ=255) agaAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCgaga > 4:228475/1‑135 (MQ=255) agaAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCgaga < 3:228475/135‑1 (MQ=255) agaAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCg > 2:271585/1‑132 (MQ=255) agaAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCg < 1:271585/132‑1 (MQ=255) aaCTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACatat > 1:224316/1‑139 (MQ=255) gTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTcacaca < 7:90163/139‑1 (MQ=255) gTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTcacaca < 4:86245/139‑1 (MQ=255) gTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTcacac < 2:120233/138‑1 (MQ=255) tttaTACCATGTAACAAAAATTTTTTGACCAGAAATAAAAAACTTTTTGTGAAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCa < 3:6642/135‑1 (MQ=255) atGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCa < 3:379032/138‑1 (MQ=255) tGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACg < 6:166495/139‑1 (MQ=255) aTACCATGTAACAAAAATTTTTTGACCAGAAATCAAAATCTTTTTGTGAAAAATCGGCAGGATTTGACTATTTTTTCATGGGGGGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACgg < 6:219836/138‑1 (MQ=255) aCCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTTACTATTTTTTCATGGGGTGACATCAATGCAAAAGCgaga > 6:372868/1‑103 (MQ=255) aCCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCgaga < 5:372868/103‑1 (MQ=255) aCCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTc > 6:148669/1‑139 (MQ=255) aCCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTGTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGAGATATTCACAAACCATTTTGCCCTCACGGCTc > 8:345186/1‑139 (MQ=255) cATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCa < 3:106182/139‑1 (MQ=255) tGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGAttt > 5:1432/1‑59 (MQ=255) tGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGAttt < 6:1432/59‑1 (MQ=255) tGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAAt > 3:392822/1‑139 (MQ=255) tGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAAt > 2:116745/1‑139 (MQ=255) tAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGa < 7:402882/139‑1 (MQ=255) aacaaacaTTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGa < 5:128259/138‑1 (MQ=255) acaaacaTTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGaca < 8:139721/139‑1 (MQ=255) acaaacaTTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGa < 3:189321/137‑1 (MQ=255) acaaacaTTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGa > 4:189321/1‑137 (MQ=255) acaaacaTTTTTTGACACTAAATCAAAAAATTTTTGTGCAAAATCGGCAGGATTTGAATATTTTTTCATGGGGTTACATCAATGCAAACGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGaca < 5:266183/139‑1 (MQ=255) acaTTTTTTGACCAGAAATAAAAAAATTTTTGGGCAAAATCGGAAGGATTTGACTTTTTTTACATGGGGTGACTTCAATGAAAAACCAAGACGCACTTATAAACACAACATTTTGCCCACACGGCTCCAATGacacaaa > 8:99325/1‑137 (MQ=255) caTTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGaca < 7:110373/134‑1 (MQ=255) caTTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGaca > 8:110373/1‑134 (MQ=255) caTTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGACACACTc < 2:115654/139‑1 (MQ=255) caTTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGACACACTc < 8:123168/139‑1 (MQ=255) caTTTTTTGACCAGAAATCAAAAACTTTTGGTGAAAAATCGGCAGTATTTGACTATTTTTTCATGGGGTGACATCAATGCAAACGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGACACACTc < 2:194458/139‑1 (MQ=255) aaTTTTTTGACCATAAATCAAAAAATTTTTTTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGGTACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGACACACTc < 6:39974/138‑1 (MQ=255) aTTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGACACACt > 1:158894/1‑137 (MQ=255) tttttGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGACACACTCAGa > 5:39974/1‑139 (MQ=255) ttGACCAGTATTACAACATTTTTTGTGGATTATCGGCTGTATTTTTGTTTTTTTTGATTTGGTGACATCATTGTAAAAGCGATACGGACATATTCACACTCCTTTTTGCCGTCACGGCTCCAATGACACACTCAGACa < 5:227721/138‑1 (MQ=255) ttGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGACACACTCAGACaa > 5:156230/1‑139 (MQ=255) ttGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGACACACTCAGACa < 1:116745/138‑1 (MQ=255) ttGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGACACACTCAGACa < 1:40533/138‑1 (MQ=255) ttGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGACACACTCAGACa < 3:391618/138‑1 (MQ=255) ttGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGAATATTTTTTCATGGGGGCACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGACACACTCAGACa < 6:215236/138‑1 (MQ=255) ttGACAAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGAATATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGACACACTCAGACa < 7:216358/138‑1 (MQ=255) ccAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGACACACTCAGACAATATg < 6:156230/139‑1 (MQ=255) cAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTc < 3:79336/115‑1 (MQ=255) cAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTc > 4:79336/1‑115 (MQ=255) aTCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGTGTTTACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGACACACTCAGACAATATGCagaag < 7:26647/139‑1 (MQ=255) aTCAAAAACTTTTTGGGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGGGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGACACACTCAGACAATATGCagaag < 2:291341/139‑1 (MQ=255) tCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGACACACTCAGACAATATGCagaaga < 3:365317/139‑1 (MQ=255) | GCCCCCTTGCTGTTTACCTTAATCTGTCAGGGTGTTTTATTTATTCAGAAAGATTTCAGGATATGTATTGAGAAAAACTGTCGTTTTCATTGTTATTATGATACCATGTAACAAACATTTTTTGACCAGAAATCAAAAACTTTTTGTGCAAAATCGGCAGGATTTGACTATTTTTTCATGGGGTGACATCAATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTCCAATGACACACTCAGACAATATGCAGAAGA > BS168_reference_genome/3031423‑3031693 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |