| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | BS168_reference_genome | 3,770,066 | (A)8→9 | intergenic (‑258/+38) | ywzF ← / ← csbD | conserved protein of unknown function/stress response protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 3,770,058 | 1 | . | A | 98.7% | 251.8 / ‑3.9 | 76 | intergenic (‑250/+46) | ywzF/csbD | conserved protein of unknown function/stress response protein |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base A (47/28); total (47/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGTTATAAAAGTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑AAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGCCTG > BS168_reference_genome/3769925‑3770190 | tgTTATAAAAGTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTTACCAATTCAGCTTCTTTTGTTGTTATATTTATTCACATCAGAACAAGCG‑aaaa > 6:354323/1‑138 (MQ=255) gTTATAAAAGTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑aaaa‑a > 7:238218/1‑138 (MQ=255) ttACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGa > 3:342449/1‑138 (MQ=255) tACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGCCCAAATCAGATTCTTTTTTTGTTATATTTATTCACTTCAGATAAAGCGAAAAA‑AAAAGACAAGaac > 6:74389/1‑138 (MQ=255) tACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAATAAGCGAAAAA‑AAAAGACAAGaaa > 8:40876/1‑139 (MQ=255) ttATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTc < 6:210345/139‑1 (MQ=255) aTGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGt > 2:286929/1‑139 (MQ=255) tcatcaTTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGttt < 1:228333/138‑1 (MQ=255) tcatcaTTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGttt < 6:188806/138‑1 (MQ=255) tcatcaTTATATAGAACACGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGttt < 1:162035/138‑1 (MQ=255) atcatTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATAGTTATTCACAGCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTcat > 8:352420/1‑137 (MQ=255) taGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTcc > 4:62277/1‑139 (MQ=255) gaagaGGCCTATTTATTCTAATAATATTTAAAAAATTTAGTTATCTTGACCAAATGATGTTCTTTTTTTGTTATATTTATTCTCATCAGAAAAAGCG‑AAAATATAAGAGTATAAACATTTCGTTTCCTGCCTCTTCCg < 4:79782/138‑1 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAGAGCGAAAAA‑AAAAGACAAGAAGCATTTCGttt < 2:332287/124‑1 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAGAGCGAAAAA‑AAAAGACAAGAAGCATTTCGttt > 1:332287/1‑124 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCTTTTCCTGCCTCTTCCGTa > 3:766/1‑139 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 4:217726/1‑139 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 4:123765/1‑139 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 3:99334/1‑139 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 3:69975/1‑139 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 5:302562/1‑139 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 1:52318/1‑139 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 1:360298/1‑139 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa < 3:197967/139‑1 (MQ=255) gagGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTAc > 4:110740/1‑138 (MQ=255) agGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTTTATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGa > 5:16143/1‑139 (MQ=255) agGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCg < 5:311477/134‑1 (MQ=255) agGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCg > 6:311477/1‑134 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAACTCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCGGTACGAt > 5:55414/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 5:230221/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 1:268815/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 7:315441/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 7:75605/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 2:256991/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 3:35706/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACAGTTCGTTTCCTGCCTCTTCCGTACGAt > 2:359672/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCATTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATATCTTTTACTGCATCTTCAGTACGAt > 3:79782/1‑138 (MQ=255) ttAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCt > 6:263343/1‑139 (MQ=255) ttAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCt > 6:174856/1‑139 (MQ=255) tCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACAtt < 4:203956/103‑1 (MQ=255) tCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACAtt > 3:203956/1‑103 (MQ=255) tCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATc > 4:96647/1‑139 (MQ=255) aaaGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGCCAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCt > 4:115879/1‑138 (MQ=255) aaaGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTg < 3:96647/139‑1 (MQ=255) atatTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAAt < 8:315441/139‑1 (MQ=255) atTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAAttt > 5:128856/1‑139 (MQ=255) aaaTTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTg > 8:157395/1‑139 (MQ=255) tttAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCt < 3:155113/139‑1 (MQ=255) tttAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCt < 6:16143/139‑1 (MQ=255) tAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAATCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCtt < 7:352420/138‑1 (MQ=255) tAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCAAATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCtt < 8:238218/138‑1 (MQ=255) cTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGata < 5:3508/139‑1 (MQ=255) aTCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGTCTTTCCCGATATCATTTTg > 2:200434/1‑138 (MQ=255) aTCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTg > 7:23437/1‑138 (MQ=255) cttcttTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGCCACGAAACATTTCGTTTCCTGCCTCTTCCGTCCGATTAAGCTTTATCTGAAAATTTATCCTTGGCTGTCCCGATATCCTTTTGGATTTc > 5:4619/1‑139 (MQ=255) cttcttTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGCCAAGAAACATTTCGTTTCCTGCCTCTTCAGTACGATTAATCTTTATCTGAAAATTTATCCTTTGCTTTCCCGAGATCCTTTTGGATTTc > 7:39306/1‑139 (MQ=255) cttcttTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTc > 3:286663/1‑139 (MQ=255) cttcttTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTc > 6:329306/1‑139 (MQ=255) tttttGTTATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCtt < 3:277038/138‑1 (MQ=255) ttATATTTATTCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCt < 2:268815/138‑1 (MQ=255) ttCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCttttt < 6:230221/138‑1 (MQ=255) ttCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCttttt < 4:194794/138‑1 (MQ=255) tCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGata > 6:14250/1‑103 (MQ=255) tCACATCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGata < 5:14250/103‑1 (MQ=255) aTCAGAAAAAGCGAAAAA‑AAAAGACCAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt < 5:228184/139‑1 (MQ=255) aTCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGc < 2:51262/122‑1 (MQ=255) aTCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGc > 1:51262/1‑122 (MQ=255) aTCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt < 1:286929/139‑1 (MQ=255) aTCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt > 4:192926/1‑139 (MQ=255) aTCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt > 1:60823/1‑139 (MQ=255) aTCAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt > 5:351665/1‑139 (MQ=255) aTCAGAAAAAGAGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCAGATATCATTTTGGATTTCGCCTTTTGCCTTATATTTTTTGcgt > 5:152482/1‑136 (MQ=255) cAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATc < 3:338074/81‑1 (MQ=255) cAGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATc > 4:338074/1‑81 (MQ=255) aGAAAAAGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCa < 4:69975/138‑1 (MQ=255) aaaGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGCCTg < 7:291243/139‑1 (MQ=255) aaaGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGCCTg < 6:216569/139‑1 (MQ=255) aaaGCGAAAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGCCTg < 3:62277/139‑1 (MQ=255) | TGTTATAAAAGTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑AAAA‑AAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGCCTG > BS168_reference_genome/3769925‑3770190 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |