| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | pSIJ663_pHT315_araE_xy | 2,159 | C→T | 5.1% | intergenic (–/‑819) | – / → eryR | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | pSIJ663_pHT315_araE_xy | 2,159 | 0 | C | T | 5.1% | 44733.4 / inf | 13081 | intergenic (–/‑819) | –/eryR | –/– |
| Reads supporting (aligned to +/- strand): ref base C (6193/6176); new base T (324/344); total (6532/6549) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 13269 total aligned reads displayed.
TCTTTTATGTGCGATGAATATTTTTCATAAATACCAGGATGTTGTTTCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAAT > pSIJ663_pHT315_araE_xy/2014‑2298 | tCTTTTATGTGCGATGAATATTTTTCATAAATACCAGGATGTTGTTT‑‑‑‑‑‑‑‑‑CTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAg > 5:313546/1‑139 (MQ=255) tgagATGAATATTTTTCATAAATACCAGGATGTTGTTTCTTTACGTTCTTTATAAATCCGGGAAACATTTTTACATAGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAg < 6:191029/136‑1 (MQ=255) tgCGATGAATATTTTTCATAAATACCAGGATGTTGTTTCTTTACGTTCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAg < 2:75136/139‑1 (MQ=255) gCGATGAATATTTTTCATAAATACCAGGATGGTGGTTCTTTACGTGCTTTATAAATACGGGAAACATTTTTACATCGTTACCATTGCAAGGCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAg < 6:303543/138‑1 (MQ=255) cGATGAATATTTTTCATAAATACCAGGATGTTGTTTCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACATCAGtt > 7:291607/1‑139 (MQ=255) cGATGAATATTTTTCATAAATACCAGGATGTTGTTTCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAg > 7:79110/1‑137 (MQ=255) cGATGAATATTTTTCATAAATACCAGGATGTTGTTTCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGtt > 4:307953/1‑139 (MQ=255) cGATGAATATTTTTCATAAATACCAGGATGTTGTTTCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGtt > 2:221707/1‑139 (MQ=255) tttCATAAATACCAGGATGTTGTTTCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGtttattta < 8:223014/138‑1 (MQ=255) ttCATAAATACCAGGATGTTGTTTCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTAc > 6:166662/1‑138 (MQ=255) aTAAATACCAGGATGTTGTTTCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATc > 8:149638/1‑139 (MQ=255) ttgttTCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACTACAGTTGGTTTATTTACAATCTTTTTTTTATTAGcc > 8:126192/1‑139 (MQ=255) ttgttTCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGcc > 6:233926/1‑139 (MQ=255) ttgttTCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGcc > 5:135320/1‑139 (MQ=255) tgttTCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAATAGTTGGTTTATTTACAATCTTTTTTTTATTAGcgg > 4:21435/1‑137 (MQ=255) ttCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTc > 3:301872/1‑138 (MQ=255) tCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCa > 3:44185/1‑138 (MQ=255) aCGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAAttt < 2:243149‑M2/137‑1 (MQ=255) aCGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCt > 4:128412‑M2/2‑139 (MQ=255) aaTCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCAtctcgt < 3:87197‑M1/139‑7 (MQ=255) atcatggaaagaTTTTTACATAGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGACACAAGAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAATTTTCTCCCTCAtctcgt < 1:299770‑M1/134‑7 (MQ=255) aTCCGGGAAACATTTTTTCATCGTTAGAAGTGCAAGTGAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAAGAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCAtctcgt < 3:163588‑M1/138‑7 (MQ=255) aTCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTTCCTCAtctcgt < 1:61356‑M1/139‑7 (MQ=255) aTCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCAtctcgt < 1:165722‑M1/139‑7 (MQ=255) aTCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGGTGGGTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCAtctcgt < 5:206943‑M1/139‑7 (MQ=255) cGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCgt > 1:42264‑M1/1‑129 (MQ=255) cGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCACTCAtctcgtctc > 3:12116‑M1/1‑130 (MQ=255) ggAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCtt > 3:22795/1‑139 (MQ=255) aaaCATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCACTCATCTCGTCTCTTta < 7:267023/139‑1 (MQ=255) cATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAGGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCATATTTCTCCCTCATCTCGTCTCTTTATATCTTTAttt > 7:54730‑M2/1‑136 (MQ=255) cATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCGAATTTCTCCCTCATCTCGTCTCTTTATATCTTTAttt > 6:14452‑M2/1‑136 (MQ=255) cATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTT‑ATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTAttt > 5:269344‑M2/1‑135 (MQ=255) cATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGGTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTT‑ATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTAttt > 4:195256‑M2/1‑135 (MQ=255) tCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTAtttta > 1:191288‑M2/1‑134 (MQ=255) tCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTAtttta > 4:107318‑M2/1‑134 (MQ=255) tCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCACTCATCTCGTCTCTTTATATCTTTAtttta > 1:236741‑M2/1‑134 (MQ=255) cGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATatctttgtttta < 2:313382‑M2/138‑13 (MQ=255) gTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTAttttat > 7:173135‑M2/1‑132 (MQ=255) ttAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAATAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTAtttta < 5:160396‑M2/136‑6 (MQ=255) ttAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTATCACTCGTCTCGTCACTTTATATCTTTATTTTATCa > 6:119946/1‑139 (MQ=255) gAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCGTaa < 2:265414/139‑1 (MQ=255) aGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAgg < 8:247438/139‑1 (MQ=255) gTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAgg < 1:212875/139‑1 (MQ=255) gTGCAAGTCAAGGTAAATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGGTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAgg < 2:197289/139‑1 (MQ=255) caagtcaagtTATATGTATCTATAATGATTTGTGGAGGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCT > 7:197803‑M1/1‑99 (MQ=255) caagtcaagtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCT > 6:255299‑M1/1‑99 (MQ=255) caagtcaagtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTa > 8:198646/1‑139 (MQ=255) agtcaagtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTAt < 6:279892/139‑1 (MQ=255) gtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCGTAAAGGAGTATTTGAAc > 7:129473/1‑139 (MQ=255) atatGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATTATAAAGGAGTATTTGAACCg < 4:285366/138‑1 (MQ=255) atGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCGTAAAgg < 8:310895/123‑1 (MQ=255) atGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATGAAGGAGTATTTGAACCGTcg > 3:279980/1‑139 (MQ=255) atGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCACTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGaa < 2:175475/133‑1 (MQ=255) tGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTcgcg < 1:100020/139‑1 (MQ=255) tCTATATTGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTATTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTTTTTTATCATAAAGGAGTATATGAACCGTcgcg < 8:291521/136‑1 (MQ=255) tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAAttt > 3:251984/1‑75 (MQ=255) tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTtct > 5:9891/1‑77 (MQ=255) tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATTATAAAGGAGTATTTGAACCGTCGCGCgg > 5:55086/1‑139 (MQ=255) tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTT‑ATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATatct > 1:256854‑M2/1‑96 (MQ=255) cTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATTATAAAGGAGTATTTGAACCGTCGCGCggg > 8:176029/1‑139 (MQ=255) tataATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa < 3:207892/139‑1 (MQ=255) taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCGTCTCGTCTCTTTATATCTTTATTTTATCATAAAgg > 1:122511/1‑114 (MQ=255) taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa < 5:113933/137‑1 (MQ=255) taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCGCTTTATATCTTTTTTTTATAGTAAAGGAGTATTTTAACAGTCGCGCGGGACa > 6:44561/1‑139 (MQ=255) taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCACTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGAc < 1:85123/138‑1 (MQ=255) taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTTAAATTTCTCCCTCATCTCGTCTCTTTATTTCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGAc < 7:149638/137‑1 (MQ=255) taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCggg < 4:239027/135‑1 (MQ=255) taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAg < 6:65910/139‑1 (MQ=255) taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAg > 4:90452/1‑139 (MQ=255) taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCACTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa < 2:107566/136‑1 (MQ=255) taATGATTTGTGGAAGCTTTGCCACAACAGGTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTTCCTCATCTCGTCGCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGAc < 8:76889/138‑1 (MQ=255) aTTTGTGGAAGTTTTGCCACAATAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCAtctcgt < 7:218731‑M1/80‑7 (MQ=255) aTTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTTCCTCATCTCGTCTCTTTATATATTTATTTTATCATAAATGAGTATTTTAAACGTCGCGCGGGACAGGttt > 4:175208/1‑139 (MQ=255) aTTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGttt > 1:275123/1‑139 (MQ=255) tttGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCGTAAAGGAGTATTTGAACCGTCGCGCGGGAc > 7:106902/1‑132 (MQ=255) tttGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCGTAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTa > 5:290625/1‑139 (MQ=255) tTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTTTCATAAAGGAGTATTTGAACCGTCCGGCGGGGCAGGGTTAt > 2:149095‑M2/2‑139 (MQ=255) tgtgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTTTATCTTTTTTTTATCGTAAAGGAGTATTTGAACCGTCGCGCGGGCCAGGTTTATg > 2:129666/1‑139 (MQ=255) tgtgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATTTCTTTTTTTTATCATAAAGTAGTATTTGAACCGTCGCGCGGGGCAGGTTTTTg > 5:24720/1‑139 (MQ=255) tgtgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCGTAAAGGAGTATTTGAACCg > 1:144059/1‑119 (MQ=255) tgtgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAgg > 2:288907/1‑105 (MQ=255) tgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCGTAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGAt > 8:103362/1‑139 (MQ=255) tgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGa > 3:140579/1‑138 (MQ=255) tgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGAt < 5:184816/139‑1 (MQ=255) tgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGAc > 4:151126/1‑127 (MQ=255) tgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGAt < 7:245440/138‑1 (MQ=255) tgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGAt < 4:4705/138‑1 (MQ=255) tgGAAGTTTTGCCACAACAGCTGGTTTATTTACACTCTTTTTTTTATTAGCCGTCAAATTTCGCCCTCATCTCGTCTCTTTATATCTATATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGAt < 2:54356/139‑1 (MQ=255) gAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAg < 8:54776/139‑1 (MQ=255) gAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCACTCATCTCGTCTATTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAg < 2:96795/139‑1 (MQ=255) aaGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAggg < 5:225188/139‑1 (MQ=255) aGTTTTGCCACAACAGGTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCGTAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAggg < 3:64804/139‑1 (MQ=255) ttGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGata < 7:311154/138‑1 (MQ=255) ttGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGata < 8:268309/138‑1 (MQ=255) ttGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATAtt > 6:212101/1‑139 (MQ=255) ttGCCACAACAGTTGGATTATTTACAATCTTTTTTTTATTATCCGTCAAATTTCTCACTCATCTCGTATCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGata < 5:77220/138‑1 (MQ=255) cacaACAGGTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGGCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTa < 4:68764/139‑1 (MQ=255) acaacaGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTAtt < 3:184800/139‑1 (MQ=255) caacaGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCGTAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTAtt < 4:265155/139‑1 (MQ=255) acaGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCGCTCATCTCGTCTCTTta < 6:85180/66‑1 (MQ=255) | TCTTTTATGTGCGATGAATATTTTTCATAAATACCAGGATGTTGTTTCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAAT > pSIJ663_pHT315_araE_xy/2014‑2298 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |