| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 1,126,886 | G→A | 9.1% | F189F (TTC→TTT) | ntdC ← | biosynthesis of neotrehalosadiamine (3,3'‑diamino‑3,3'‑dideoxy‑alpha,beta‑trehalose), glucose‑6‑P 3‑dehydrogenase; kanosamine biosynthesis (recent HGT island) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 1,126,886 | 0 | G | A | 9.1% | 201.6 / 7.6 | 66 | F189F (TTC→TTT) | ntdC | biosynthesis of neotrehalosadiamine (3,3'‑diamino‑3,3'‑dideoxy‑alpha,beta‑trehalose), glucose‑6‑P 3‑dehydrogenase; kanosamine biosynthesis (recent HGT island) |
| Reads supporting (aligned to +/- strand): ref base G (25/35); new base A (3/3); total (28/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATGATATTTACAAATACCTTGTTCTTCAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATCTCTCCAAGTAAACTTCTTACGTCTAAGTGCACTATTTTTCTTGAAGTGTACTTTTATG > BS168_reference_genome/1126749‑1127024 | atgatATTTACAAATACCTTGTTCTTCAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCGTTACTGATTCTGTGATGAAATCACTATCg > 3:191339/1‑138 (MQ=255)atgatATTTACAAATACCTTGTTCTTCAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCg > 6:119786/1‑138 (MQ=255)atgatATTTACAAATACCTTGTTCTTCAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCg < 4:267386/138‑1 (MQ=255)atgatATTTACAAATACCTTGTTCTTCAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCg > 7:250449/1‑138 (MQ=255)atgatATTTACAAATACCTTGTTCTTCAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCg > 3:148993/1‑138 (MQ=255) atatTTACAAATACCTTGTTCTTCAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAAc < 3:168793/138‑1 (MQ=255) atatTTACAAATACCTTGTTCTTCAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACa < 7:18888/139‑1 (MQ=255) tACAAATACCTTGTTCTTCAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAatac > 3:108991/1‑139 (MQ=255) ccTTGTTCTTCAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAAtaccatacca < 5:164067/138‑1 (MQ=255) ccTTGTTCTTCAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAAtaccatacca < 5:146636/138‑1 (MQ=255) ccTTGTTCTTCAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAAtaccatacca < 4:18904/138‑1 (MQ=255) ttGTTCTTCAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGACCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATg > 3:40687/1‑138 (MQ=255) tGTTCTTCAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGAGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGCACAAATACCATACCATGt > 4:179118/1‑138 (MQ=255) ttcttcAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAAc > 8:48128/1‑120 (MQ=255) ttcttcAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAAc < 7:48128/120‑1 (MQ=255) ttcttcAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATAACTCTCGAACAAATACCATACCATGTCa > 3:66637/1‑138 (MQ=255) ttcttcAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTG‑TTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAAt < 2:208295/139‑1 (MQ=255) cAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAAtaccatacca < 2:54739/128‑1 (MQ=255) cAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAAtaccatacca > 1:54739/1‑128 (MQ=255) cAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATaccataccat < 6:162030/129‑1 (MQ=255) cAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATaccataccat > 5:162030/1‑129 (MQ=255) cAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATaa < 2:4855/137‑1 (MQ=255) cAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATaa < 1:219252/137‑1 (MQ=255) cAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAgg > 5:57959/1‑139 (MQ=255) cAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCATCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCAATCTCGAACAAATACCATACCATGTCAATAAgt > 5:168350/1‑138 (MQ=255) gCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATa < 6:147271/139‑1 (MQ=255) aTAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATAccc < 7:235436/139‑1 (MQ=255) tAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCAAACAAATACCATACCATGTCAATAAGGTGAATACCCa > 6:10431/1‑139 (MQ=255) tAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCAAACAAATACCATACCATGTCAATAAGGTGAATACCCa > 8:34612/1‑139 (MQ=255) aaTTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGa < 5:119786/139‑1 (MQ=255) tGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATcccc > 2:202779/1‑138 (MQ=255) cATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCAAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCaa < 5:10431/139‑1 (MQ=255) aTAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCAAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCaa < 7:34612/138‑1 (MQ=255) tCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATc < 5:24910/139‑1 (MQ=255) tCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATc < 4:61513/139‑1 (MQ=255) aTCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAATTCACTCTCGAACAAATACCATACCATGTCAATAATGTTAATACCCAGATCCCCGAATGATCCa < 7:169063/139‑1 (MQ=255) tACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCAAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTc > 8:168933/1‑139 (MQ=255) gTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATc > 5:82851/1‑129 (MQ=255) gTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATc < 6:82851/129‑1 (MQ=255) gTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGtctt > 2:268447/1‑139 (MQ=255) gTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGgct > 5:239015/1‑138 (MQ=255) ccTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGtcttct < 8:191571/138‑1 (MQ=255) ccTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCAAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGtcttct < 7:168933/138‑1 (MQ=255) ccTGTTTATCCTCTTTAGATTTTACATTTGTGTTCCTCTTTGCCCTTACTGAATCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGtcttct < 8:267274/138‑1 (MQ=255) aTCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTAt > 1:265697/1‑137 (MQ=255) tCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAg > 4:289512/1‑139 (MQ=255) ctctTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGc < 1:202779/138‑1 (MQ=255) ttGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTc < 2:265697/136‑1 (MQ=255) ttGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCAt < 4:66637/138‑1 (MQ=255) ttGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCAt < 4:162192/138‑1 (MQ=255) tttACATTTGTGTTCATATTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACACAGATCCCCCAATGATCCACTCGTCTTCTTAATATTAGGGTCAtctaggc > 2:246029/1‑135 (MQ=255) tgtgTTCATATTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATCTCTCCAAGTaaa < 7:244635/138‑1 (MQ=255) tgtgATCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGACTACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATCTCTCCAAGTaaa < 7:244631/138‑1 (MQ=255) tgtcTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAAAACCATACCATGTCAATAATGTGAATACCCAGATCCCCCAATGATCCACTCCACATCTTACATTTACCGTCATCACACCaacaaaa > 7:154928/1‑133 (MQ=255) tGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATCTCTCCAAGTAAACTTCTTACGTCt < 4:105113/138‑1 (MQ=255) cTTTCTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATCTCTCCAAGTAAACTTCTTACGTCTAAGTg < 4:40687/139‑1 (MQ=255) cTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATCTCTCCAAGTAAACTTCTTACGTCTAAGTg < 8:250449/139‑1 (MQ=255) aCTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATCTCTCCAAGTAAACTTCTTACGTCTAAGTGCag > 1:37760/1‑138 (MQ=255) aCTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATCTCTCCAAGTAAACTTCTTACGTCTAAGTGCAc > 1:59619/1‑139 (MQ=255) aTTCTGTGATGAAATCACTCTCGAAGAAATACCATACCATGTCAATAAGGTGAATACCAAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATCTCTCCAAGTATACTTCTTACGTCTAAGTGCACTAt < 8:154928/138‑1 (MQ=255) aTTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATCTCTCCAAGTAAACTTCTTACGTCTAAGTGCACTAt < 6:239015/138‑1 (MQ=255) tCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGtcttct < 1:73971/85‑1 (MQ=255) tCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGtcttct > 2:73971/1‑85 (MQ=255) tCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATATCTCCAAGTAAACTTCTTACGTATAAGTGCACTAtttt > 5:199680/1‑139 (MQ=255) tgtgATGAAATCACTCTCGAACAAATACCATACCATTTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCAAATCTCCAAGTAAAAATCTTAAGTCTAACTGCACTAttttta > 7:160296/1‑138 (MQ=255) gatgaAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATCTCTCCAAGTAAActtc > 3:288260/1‑112 (MQ=255) gatgaAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATCTCTCCAAGTAAActtc < 4:288260/112‑1 (MQ=255) gaAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATCTCTCCAAGTAAACTTCTTACGTCTAAGTGCACTATTTTTCTTGAAg > 1:167465/1‑139 (MQ=255) tCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATCTCTCCAAGTAAACTTCTTACGTCTAAGTGCACTATTTTTCTTGAAGTGTa < 2:19438/139‑1 (MQ=255) tCACTCTCGAACAAATACCATACCATGTCAATAAGGGGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATCTCTCCAAGTAAACTTCTTACGTCTAAGTGCACTATTTTTCTTGAAGTGTa < 1:110262/139‑1 (MQ=255) tctcGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACATTTATCGTCATCTCTCCAAATAAACTTCTTACGTCTAAGTGCACTATTTTTGTTTAAGTGTACttt > 5:204432/1‑139 (MQ=255) gAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATCTCTCCAAGTAAACTTCTTACGTCTAAGTGCACTATTTTTCTTGAAGTGTACTTTTa < 4:148993/137‑1 (MQ=255) gAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATCTCTCCAAGTAAACTTCTTACGTCTAAGTGCACTATTTTTCTTGAAGTGTACTTTTATg < 3:179118/139‑1 (MQ=255) | ATGATATTTACAAATACCTTGTTCTTCAGCTGGCCATAAATTTCTGCATAGTCATCTACAAGTACCTGTTTATCCTCTTTTGTTTTTACATTTGTGTTCATCTTTGCCCTTACTGATTCTGTGATGAAATCACTCTCGAACAAATACCATACCATGTCAATAAGGTGAATACCCAGATCCCCCAATGATCCACTCGTCTTCTTACTATTAGCGTCATCTCTCCAAGTAAACTTCTTACGTCTAAGTGCACTATTTTTCTTGAAGTGTACTTTTATG > BS168_reference_genome/1126749‑1127024 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |