| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | BS168_reference_genome | 2,387,885 | (A)7→8 | coding (704/735 nt) | yphF ← | putative lipoprotein of unknown function |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 2,387,878 | 1 | . | A | 93.7% | 207.8 / 6.3 | 63 | coding (711/735 nt) | yphF | putative lipoprotein of unknown function |
| Reads supporting (aligned to +/- strand): ref base . (2/2); new base A (29/30); total (31/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TATATGTGTATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGCAA > BS168_reference_genome/2387741‑2388010 | tataTGTGTATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCt > 1:19502/1‑138 (MQ=255)tataTGTGTATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCt > 3:102239/1‑138 (MQ=255)tataTGTGTATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCt > 2:197504/1‑138 (MQ=255) gtgtATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTTATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa > 3:379939/1‑138 (MQ=255) gtgtATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa > 4:210102/1‑138 (MQ=255) tATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa‑aaa > 3:186719/1‑137 (MQ=255) tATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa‑aaa > 5:68592/1‑137 (MQ=255) tATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa‑aaa > 2:39364/1‑137 (MQ=255) tATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa‑aaa > 5:100368/1‑137 (MQ=255) tATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa‑aaa > 4:86742/1‑137 (MQ=255) tGACTTAGTCCTATTAGAATATGACATCTTTAGAAAAATTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGAAAGTGAGAAAGTTTAATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa‑aaacag > 2:380845/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTTGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa‑aaacag > 4:260234/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa‑aaacag > 4:78749/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa‑aaacag > 8:161712/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa‑aaacag > 1:258791/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa‑aaacag > 5:138173/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa‑aaacag > 4:62018/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa‑aaacag > 6:253556/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa‑aaacag > 8:164761/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa‑aaacag > 5:97899/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑AATAAA‑AA‑CAg > 7:115836/1‑139 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCACTATTTGTATGCAAGGGAGAAAGTTTCATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa‑aaacag > 5:22697/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCATTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑aa‑aaa‑aaacag > 4:39572/1‑135 (MQ=255) gTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTc < 5:406605/139‑1 (MQ=255) tGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCt > 1:396107/1‑139 (MQ=255) tGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCt > 1:390244/1‑139 (MQ=255) tGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCt > 5:176595/1‑139 (MQ=255) tCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGt > 4:131347/1‑139 (MQ=255) tCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGt > 1:314776/1‑139 (MQ=255) tCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGt < 6:176595/139‑1 (MQ=255) cTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGttt < 7:254261/139‑1 (MQ=255) aTTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGt > 1:205763/1‑139 (MQ=255) tttGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCTTTCCTTTTTCATATCATTTTCT‑‑AA‑AAA‑AACCAGGTGCGTGTGTGTc > 2:289286/1‑139 (MQ=255) tttGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCAAATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGt < 6:138173/138‑1 (MQ=255) atatGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTa > 1:42908/1‑139 (MQ=255) atatGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTa > 3:129453/1‑139 (MQ=255) atatGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑AAGGTTCCTGTTTGTCAttt > 2:201587/1‑138 (MQ=255) atGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTAcc < 1:80920/139‑1 (MQ=255) tttAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATAttt < 4:102239/139‑1 (MQ=255) tAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATAttt < 2:19502/137‑1 (MQ=255) tttCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTGTTAATTTACATTATATTTTAAATaaaa > 3:211367/1‑139 (MQ=255) ttCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAAc > 2:16399/1‑139 (MQ=255) aTCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAAcgcg < 3:62018/137‑1 (MQ=255) aTCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAAcgcg < 5:253556/137‑1 (MQ=255) aTCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAAcgcg < 4:34927/137‑1 (MQ=255) aTCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAAcgc < 6:97899/136‑1 (MQ=255) aTCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCggg < 8:89153/139‑1 (MQ=255) aTCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGAAAGGGAGAAAGGTTCAGTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTTCCGTATATTTTACATAAAACGCggg > 1:302165/1‑139 (MQ=255) tCCTCAATTTATTAATATAAAAAAAACTTTCTCCCTATTTGTTTTCAAGTGTTAAATGTTAATTACTTTTTCATATTATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCgggg < 4:211367/139‑1 (MQ=255) aaTCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACa < 7:164761/137‑1 (MQ=255) ttAATATAAAAAAACCTTTCTCCCTATTTTTATGCAAGGGATAAAGGTTCATTACTTTTTCATATAATTTTCTA‑AA‑AAA‑AA‑CAGGTTACGGTTTGTCATTTACAGTATATTTTACAGAAAACGAGGGGACAAATGGGGt > 3:347779/1‑139 (MQ=255) ttAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGaa < 1:51154/119‑1 (MQ=255) ttAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGaa > 2:51154/1‑119 (MQ=255) taAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATg < 4:379939/139‑1 (MQ=255) taAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATg > 7:236954/1‑139 (MQ=255) aaaaaaCCTTTCTCCCTATTTGTATGCAAGGTAGAAATGATCATTCCTTTTTCATATCATTTTCT‑‑AA‑AAATAA‑CATGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGcc < 2:205763/139‑1 (MQ=255) aaaaaaCCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGc > 3:216862/1‑138 (MQ=255) aaaaaCCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGcc < 3:210102/139‑1 (MQ=255) tctcCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCata < 1:39364/137‑1 (MQ=255) tctcCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCata < 6:100368/137‑1 (MQ=255) ctcCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATc < 3:78749/138‑1 (MQ=255) ccTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTTTCATTTACCGTATATTTTAGAGAAAACGCGTTGACAAAGGGGGTTTCATGCCAAATCATATCCTg < 1:380845/138‑1 (MQ=255) ttGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGAttt < 2:390244/138‑1 (MQ=255) tGCAAGGGAGAAAGGTTCTTTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTcc > 2:371409/1‑139 (MQ=255) tGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTcc > 6:342774/1‑139 (MQ=255) tGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTGTGTCATTGACCGTATATTTTACAGAAAACGCGGGGACAAAGGTGGTTTCCTGCCAACTCATATCCTGGATTTCAGTcc > 2:49938/1‑139 (MQ=255) tGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTATCTA‑AA‑AAA‑AA‑CAGGGTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTcc < 4:91782/139‑1 (MQ=255) tGCAAGGCAGAAAGGTTCATTCCTTTTTCATATCATTATCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCAGTTACCGTATATTTTACAGAAAACGCGGGGACACCTGGGGTTTCATGCCAATTCATATCCTGGATTTCAggac > 6:151624/1‑136 (MQ=255) gaaGTGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCTAATCATATCCTGGATTTCAGTccc < 4:347779/137‑1 (MQ=255) gggAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGt > 8:217993/1‑139 (MQ=255) gggAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGt > 8:64618/1‑139 (MQ=255) gggAGAAAGGTTCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGt > 3:336436/1‑139 (MQ=255) ttCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGttt > 6:394053/1‑139 (MQ=255) ttCATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGttt > 8:177892/1‑139 (MQ=255) cATTCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGttttt > 2:404079/1‑139 (MQ=255) tCCTTTTTCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTCCAGTCCCGGGTTTAAACGTTTTTTTg > 5:209548/1‑139 (MQ=255) ttttCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAgg < 3:62904/79‑1 (MQ=255) ttttCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAgg > 4:62904/1‑79 (MQ=255) ttttCATATCATTTTCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCATATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCttg > 8:75676/1‑138 (MQ=255) ttttCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGCaa < 2:42908/139‑1 (MQ=255) ttttCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGCaa < 4:186719/139‑1 (MQ=255) ttttCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGCaa < 1:176121/139‑1 (MQ=255) ttttCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGCaa < 4:216862/139‑1 (MQ=255) ttttCTA‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGCaa < 8:236954/139‑1 (MQ=255) atttCT‑‑AACAAA‑AA‑GACGTTACTGTTTGTCATTTACAGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAAAGTTTTTTTGCTTTTTTTGAGGCaa < 6:22697/138‑1 (MQ=255) | TATATGTGTATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑‑AA‑AAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGCAA > BS168_reference_genome/2387741‑2388010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |