| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | BS168_reference_genome | 3,770,066 | (A)8→9 | intergenic (‑258/+38) | ywzF ← / ← csbD | conserved protein of unknown function/stress response protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 3,770,058 | 1 | . | A | 96.8% | 299.1 / 2.5 | 93 | intergenic (‑250/+46) | ywzF/csbD | conserved protein of unknown function/stress response protein |
| Reads supporting (aligned to +/- strand): ref base . (1/2); new base A (52/38); total (53/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTTATAAAAGTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑G‑‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGCCTG > BS168_reference_genome/3769926‑3770190 | gTTATAAAAGTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑G‑‑aaaaa > 1:208540/1‑138 (MQ=255) aaaGTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑G‑‑aaaaa‑aaaagac < 7:90676/139‑5 (MQ=255) gTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑G‑‑aaaaa‑aaaagac > 8:326491/1‑132 (MQ=255) gTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑G‑‑aaaaa‑aaaagac > 6:57971/1‑132 (MQ=255) ttACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGa < 4:121178/138‑1 (MQ=255) tACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACaa < 6:220329/135‑1 (MQ=255) tACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACaa > 5:220329/1‑135 (MQ=255) tATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGaaa > 3:269189/1‑132 (MQ=255) tATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGaaa < 4:269189/132‑1 (MQ=255) aTGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTTACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCTA‑‑AAAAA‑AAA‑GACAAGAAACATTTCGt > 6:242658/1‑139 (MQ=255) aTGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGACAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGt > 3:306623/1‑139 (MQ=255) aTGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGt > 3:322352/1‑139 (MQ=255) aTGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGt > 3:271334/1‑139 (MQ=255) tcatcaTTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGttt < 6:189104/138‑1 (MQ=255) atcatTATATAGAAGAGGCCTATTAATTCAATGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATTTTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑TACAAGAAACATTTCGTTTCCt > 4:67862/1‑139 (MQ=255) atcatTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCt > 1:253419/1‑139 (MQ=255) catTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGc < 7:116976/139‑1 (MQ=255) atTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGcc > 6:209828/1‑139 (MQ=255) gcagatGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCCAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑G‑‑AAAAA‑AAACGACAAGAAACATTTCGTTTCCTGCCTCTTCCg < 5:34026/136‑1 (MQ=255) gaagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCg < 3:82018/138‑1 (MQ=255) gaagaGGCCTATTAATTCAAAGAATAATTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCg < 4:358850/138‑1 (MQ=255) gaagaGGACTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCg < 4:26846/138‑1 (MQ=255) gagGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACg > 3:2761/1‑139 (MQ=255) agGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GAAAAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTAc > 6:218397/1‑138 (MQ=255) agGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAACCATTTCGTTTCCTGCCTCTTCCGTACGa > 5:246477/1‑139 (MQ=255) ggCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt < 5:168445/139‑1 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTCCCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GCCAAGAAACATTTCGTTTCCTGCATCTTCCGTACGAt > 3:120398/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GAAAAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 7:385680/1‑139 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGACACATTTCGTGTCCTGCCTCTTCCGTACGAt > 6:2648/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACTTTTCGTTTCCTGCCTCTTCAGTACGAt > 8:377329/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTGTTCCGTACGAt > 6:331115/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCg < 7:252476/132‑1 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCg > 8:252476/1‑132 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCTTACGAt > 6:400277/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACTAt > 6:262796/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 1:26445/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 3:383962/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 1:372677/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 2:311464/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 2:369028/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 1:41907/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 5:227919/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 3:294475/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 4:264470/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 3:89389/1‑138 (MQ=255) ttAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGc > 8:337365/1‑119 (MQ=255) ttAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGc < 7:337365/119‑1 (MQ=255) ttAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCt > 6:382162/1‑139 (MQ=255) ttAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCt > 5:389322/1‑139 (MQ=255) tCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTTTc > 1:357252/1‑139 (MQ=255) tCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATc > 1:71760/1‑139 (MQ=255) tCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATc > 1:128490/1‑139 (MQ=255) aaaGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCt > 3:54349/1‑138 (MQ=255) aaaGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTg < 5:209828/139‑1 (MQ=255) aGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGa > 4:49695/1‑138 (MQ=255) aGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGa > 2:96050/1‑138 (MQ=255) aGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGa > 8:318145/1‑138 (MQ=255) gAATATTTAAAAAATTTAGTAACCTTGACCAAATCAGCTTCTTTTTTTCTTATATATAATCAAATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTCCGATTAATCTTTATCTGaa > 6:351061/1‑138 (MQ=255) atatTTAATAAATTTAGTTTCCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAAt < 2:155002/139‑1 (MQ=255) tAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCtt < 4:322352/138‑1 (MQ=255) tAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCtt < 4:271334/138‑1 (MQ=255) aCCTTGAACAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCg < 8:311211/138‑1 (MQ=255) cTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGata < 4:89389/139‑1 (MQ=255) cTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGata < 8:255032/139‑1 (MQ=255) cTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGata < 2:128490/139‑1 (MQ=255) ttGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGatat > 3:396236/1‑139 (MQ=255) aCCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCGTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCt > 6:276807/1‑139 (MQ=255) aCCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCt > 5:73914/1‑139 (MQ=255) aaTCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTg > 7:237669/1‑139 (MQ=255) aTCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCTTGCCTATTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTg > 4:35738/1‑138 (MQ=255) gCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGAttt < 5:197398/139‑1 (MQ=255) gCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGAttt < 3:49695/139‑1 (MQ=255) cttcttTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTc > 5:248911/1‑139 (MQ=255) ttcttTTTTTGTTATAATTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGACTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGAttt < 8:205109/137‑1 (MQ=255) cttTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCg < 4:396236/137‑1 (MQ=255) tttttGTTATTTTTATTCACATCAGTAAAAGC‑G‑‑AAAAATAAA‑GACAAGAAACATTTCGTTTCCTGCGTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCTCCtt < 4:293283/138‑1 (MQ=255) tttttGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCtt < 2:372677/138‑1 (MQ=255) tttttGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCt < 2:26445/137‑1 (MQ=255) tttGTTATATTTATTCACGTCAGAAAAAGC‑GAAAAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCttt < 4:76658/138‑1 (MQ=255) ttATATTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCt < 2:253419/138‑1 (MQ=255) tataTTTATTCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCtt < 1:369028/138‑1 (MQ=255) ttcccctCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGACTCTTCCGTAGGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCAGATATCATTGTGGATTTCGCCTTTTGCCTTATCttgttt > 6:204719/7‑139 (MQ=255) tCACATCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCGTTATCTTTTTTg > 7:348213/1‑139 (MQ=255) acaTCAGAAAAAGC‑GAAAAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGc < 8:385680/139‑1 (MQ=255) caTCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCATTATCTTTTTTGCCt > 8:153997/1‑139 (MQ=255) aTCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACTTATCGTTTCATGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGTATTTCCCGATATCGTTTTGGATATCGCCTTTTGCGTTAACTTTTTTgaat > 1:85136/1‑135 (MQ=255) aTCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt < 8:237669/139‑1 (MQ=255) aTCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt > 4:69467/1‑139 (MQ=255) aTCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt > 8:279824/1‑139 (MQ=255) aTCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt < 3:102078/139‑1 (MQ=255) aTCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt < 3:100571/139‑1 (MQ=255) aTCAGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTACCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt < 2:99430/139‑1 (MQ=255) aGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCa < 6:389322/138‑1 (MQ=255) aGAAAAAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCa < 2:71760/138‑1 (MQ=255) aGAAAAACC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGGTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCa < 5:272432/138‑1 (MQ=255) gAAACAGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGc < 7:377329/139‑1 (MQ=255) aaaGC‑GA‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGCCTg < 2:31993/139‑1 (MQ=255) | GTTATAAAAGTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑G‑‑AAAAA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGCCTG > BS168_reference_genome/3769926‑3770190 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |