| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | BS168_reference_genome | 1,672 | T→C | H421H (CAT→CAC) | dnaA → | chromosomal replication initiator informational ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 1,672 | 0 | T | C | 98.3% | 417.3 / NA | 115 | H421H (CAT→CAC) | dnaA | chromosomal replication initiator informational ATPase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (54/59); minor base A (0/2); total (54/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 115 total aligned reads displayed.
GACAAAGTCAGTAGCTTTTCCGCGTCAAATCGCCATGTACTTATCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCATGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGT > BS168_reference_genome/1546‑1807 | gACAAAGTCAGTAGCTTTTCCGCGTCAAATCGCCATGTACTTATCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTc > 5:402747/1‑138 (MQ=255) tAGCTTTTCCGCGTCAAATCGCCATGTACTTATCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTgg > 3:14147/1‑138 (MQ=255) tAGCTTTTCCGCGTCAAATCGCCATGTACTTATCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGc < 1:259504/139‑1 (MQ=255) tAGCTTTTCCGCGTCAAATCGCCATGTACTTATCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGc < 7:307673/139‑1 (MQ=255) ttCCGCGTCAAATCGCCATGTACTTATCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAgatga > 8:81510/1‑139 (MQ=255) ttCCGCGTCAAATCGCCATGTACTTATCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAgatg < 2:99445/138‑1 (MQ=255) ttCCGCGTCAAATCGCCATGTACTTATCAAGGGAAATGACTGATTCCTCTCTTCATAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAACAAATTTCAACTCTGCTGGCtgatga > 5:213011/1‑139 (MQ=255) cggcacaTCGCCATGTAATTATCAATGTAAATGACTGATTCCTCTCTTCCTAAAATCGGAGAAGAGTTTGGAGGACGTGATCATACTACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAAc < 1:194925/133‑1 (MQ=255) cgTCAAATCGCCATGTACTTATCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTTGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAAc < 6:222057/139‑1 (MQ=255) cgTCAAATCGCCAGGTACTTCTCAAGGGAACTGACTGAATCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAAc < 2:210313/139‑1 (MQ=255) cGCCATGTACTTATCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTcag < 1:32018/139‑1 (MQ=255) ccATGTACTTATCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTcagca < 6:302651/139‑1 (MQ=255) tATCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTaa > 8:225985/1‑138 (MQ=255) aTCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGAtgatga > 1:158121/1‑117 (MQ=255) aTCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGAtgatga < 2:158121/117‑1 (MQ=255) aTCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTcagca < 5:321909/129‑1 (MQ=255) aTCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTcagca > 6:321909/1‑129 (MQ=255) aTCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTaa > 3:326532/1‑137 (MQ=255) aTCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTaa > 7:193772/1‑137 (MQ=255) aTCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTaa > 2:286381/1‑137 (MQ=255) aTCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGATTCAGCAGCATGTaa > 6:33005/1‑137 (MQ=255) tCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTaaaa < 7:81510/138‑1 (MQ=255) aaGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGa < 3:58440/138‑1 (MQ=255) gggAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAAt > 8:200248/1‑139 (MQ=255) gggAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAAt > 3:272661/1‑139 (MQ=255) gggAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAAt > 4:216386/1‑139 (MQ=255) gggAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAAt > 8:326559/1‑139 (MQ=255) gggAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAAt > 7:327246/1‑139 (MQ=255) gggAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAAt > 3:82227/1‑139 (MQ=255) gggAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAAt > 6:298945/1‑139 (MQ=255) gggAAATGACTGATTCCTCTCTTCCTAAAATCGGGGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTTCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAAt > 1:331573/1‑139 (MQ=255) aTGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAAc < 3:44485/109‑1 (MQ=255) aTGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAAc > 1:140636/1‑109 (MQ=255) aTGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAAc > 4:44485/1‑109 (MQ=255) aTGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAAc < 2:140636/109‑1 (MQ=255) aTGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAg > 6:42163/1‑139 (MQ=255) tGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTGTGGAGGACGGGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGa < 4:342454/139‑1 (MQ=255) aCTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGaa < 1:267836/138‑1 (MQ=255) aTTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACATCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCt > 4:284499/1‑139 (MQ=255) aTTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCt > 3:266321/1‑139 (MQ=255) aTTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCt > 5:252935/1‑139 (MQ=255) tCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCtt > 2:305681/1‑138 (MQ=255) ccTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTa < 5:211198/138‑1 (MQ=255) tctctTCCTAAAATCGGTGAAGAGTTGGGAGGACGTGATCATACGCCCGTTATTCAAGCGCTCGAAAAAATATCAAACCTGCTGGCAGATGATCAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTaaa > 1:340983/1‑138 (MQ=255) ctctTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAAc > 6:182263/1‑129 (MQ=255) ctctTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTaaa > 7:90024/1‑137 (MQ=255) ccTAAAATCGGTGAAGAGTTTGTAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATATCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAg < 2:109961/135‑1 (MQ=255) ccTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAg > 3:162680/1‑138 (MQ=255) ccTAAAATCGGTGAAGAGTTTGGAGGACGGGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCa < 8:250392/137‑1 (MQ=255) aaaaTCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGAcc > 1:161014/1‑139 (MQ=255) aaaTCGGCGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGAc < 4:173742/137‑1 (MQ=255) ggTGAAGAGGTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGAt < 8:15995/139‑1 (MQ=255) gTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATc < 7:326559/139‑1 (MQ=255) agagTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAAt < 1:286381/138‑1 (MQ=255) agagTTTGGAGGACGAGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGTAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAAt < 3:161585/138‑1 (MQ=255) tGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGaa > 7:4597/1‑70 (MQ=255) tGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGaa < 8:4597/70‑1 (MQ=255) tGGAGGACGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGa > 8:328233/1‑138 (MQ=255) aggaCGAGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAgt > 2:40172/1‑139 (MQ=255) aCGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGAt > 7:9945/1‑122 (MQ=255) aCGTGATCATACGACCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAgtgt > 4:125844/1‑138 (MQ=255) aCGTGATCATACGACCGATATTCATGCGCACGAAAAAATTACAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAgtgt > 4:323190/1‑138 (MQ=255) cccGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCgg < 1:90650/138‑1 (MQ=255) aCCGTTATTCATGCTCACGAAAAAATATCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATTGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCgg < 5:254467/139‑1 (MQ=255) aCCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCgg < 5:160476/139‑1 (MQ=255) aCCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCgg < 7:202667/139‑1 (MQ=255) aCCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCgg < 1:314500/139‑1 (MQ=255) aCCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCgg < 1:305681/139‑1 (MQ=255) aCCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCgg < 3:52285/139‑1 (MQ=255) aCCGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGAAGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCgg < 1:154006/139‑1 (MQ=255) aCCGTTATTCATCCGCAAGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCATCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCgg < 3:241464/139‑1 (MQ=255) ccGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTcagca > 4:267390/1‑61 (MQ=255) ccGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTcagca < 3:267390/61‑1 (MQ=255) ccGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCgg > 8:88741/1‑138 (MQ=255) ccGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCgg > 8:212796/1‑138 (MQ=255) cGTTATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGAGGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGGGTGAATAACTTTTCGGaa < 5:121025/139‑1 (MQ=255) ttATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCgg < 3:108202/135‑1 (MQ=255) ttATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCgg > 4:108202/1‑135 (MQ=255) ttATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGt < 5:298945/139‑1 (MQ=255) ttATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGt < 4:272661/139‑1 (MQ=255) ttATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGt > 1:134029/1‑139 (MQ=255) ttATTCATGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGt < 6:115043/139‑1 (MQ=255) ttATTCATGCGCAAGAAAAAATTTCAAAACTTCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGt < 5:23848/139‑1 (MQ=255) tATTCTTGCGCACTAAAAAAATTCAAAACTGGTGGCATATTTTGAACAGATTCAGCAGCATGTAAATGATATTAATGAACTGCTTAAATAGCAGTACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGattt < 2:331573/138‑4 (MQ=255) aTGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATaca < 1:280798/139‑1 (MQ=255) aTGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGAGCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATaca < 4:162680/139‑1 (MQ=255) tGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAATGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGCTCAATCGGGTAAAGTGTGAATAACTTTTCGGAAGTCATaca > 4:28520/1‑138 (MQ=255) tGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATaa > 2:339897/1‑120 (MQ=255) tGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATaca > 1:40033/1‑138 (MQ=255) tGCGCACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATaca > 6:139918/1‑138 (MQ=255) gcgcACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACa < 4:387986/74‑1 (MQ=255) gcgcACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATaca > 3:166987/1‑137 (MQ=255) gcgcACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATaca > 6:91502/1‑137 (MQ=255) cgcACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATAcaca < 5:91502/138‑1 (MQ=255) gcACGAAAAAATTTCAAACCAGCTGGCTGATTCTGAACAGCTTCAGCAGCAAGTAAAAGAAATTAAAGAACACCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGGGAATAACTTTTCGGAAGTCATACACAGt < 6:213011/139‑1 (MQ=255) gcACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGt < 3:182125/139‑1 (MQ=255) gcACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGt < 3:323190/139‑1 (MQ=255) gcACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGt < 4:117059/139‑1 (MQ=255) gcACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGt < 2:40033/139‑1 (MQ=255) gcACGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGt < 7:200248/139‑1 (MQ=255) | GACAAAGTCAGTAGCTTTTCCGCGTCAAATCGCCATGTACTTATCAAGGGAAATGACTGATTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGTTATTCATGCGCATGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAGCAGGACCGGGGATCAATCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGT > BS168_reference_genome/1546‑1807 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |