Predicted mutation
evidence seq id position mutation freq annotation gene description
JC pSIJ663_pHT315_araE_xy 2,655 Δ3 bp 100% intergenic (–/‑321)  / → eryR –/–

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? pSIJ663_pHT315_araE_xy = 265485 (0.010)15728 (1.590) 220/232 NT 99.5% intergenic (–/‑324) –/eryR –/–
?pSIJ663_pHT315_araE_xy 2658 = 85 (0.010)intergenic (–/‑320) –/eryR –/–

Only 100 of 18978 total aligned reads displayed.

GAACTATTGATGCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  pSIJ663_pHT315_araE_xy/2517‑2654
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGCGTAATGT  >  pSIJ663_pHT315_araE_xy/2658‑2795
                                                                                                                                                                                                                                                                                    
 AACTATTGATGCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCG                                                                                                                                           >  8:395986/1‑138
    gATTGATGCTGTGGACACTATTTACAGCGTCGCCCTCTACTGATCGCGTAAAGGCGTTGCAAGATAAAGTAAAATCATTGCAGCATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  5:247473/138‑1
    TATTGTTTCTGGTGAAACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGTATCATGAGGTAGGGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  8:277500/139‑1
     tTTGTTGCTGTGGATACTATTTACAGCGGCTCCTTCTAATGTTGTCGTAAAGGATTTGCAATATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  2:400209/137‑1
      TTGATGCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  6:32717/137‑1
      TTGATGCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  4:364025/137‑1
      TTGATGCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  1:417355/137‑1
      TTGATGCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  5:283000/137‑1
      TTGATGCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  5:152468/137‑1
       TGATGCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAA                                                                                                                                    >  2:182005/1‑139
           GCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTT                                                                                                                                 >  7:318572/1‑138
             TGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAG                                                                                                                              <  4:30325/139‑1
             TGGGGATACTATTTACAGCGGCGCCATATACTTATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAG                                                                                                                              <  2:153717/139‑1
              GGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAA                                                                                                                               >  1:264080/1‑137
              GGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAA                                                                                                                               >  5:408891/1‑137
              GGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       >  4:97172/1‑129
              GGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       >  2:50784/1‑129
              GGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCAGAAGCAAACTT                                                                                                                                 >  4:162169/1‑135
               GGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAG                                                                                                                            <  8:183716/139‑1
               GGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAG                                                                                                                            <  6:173570/139‑1
               GGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAG                                                                                                                            <  4:102276/139‑1
               GGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAG                                                                                                                              <  7:41172/137‑1
               GGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAG                                                                                                                              <  1:12932/137‑1
                  ATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGT                                                                                                                         <  2:310087/139‑1
                  ATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGT                                                                                                                         <  3:71679/139‑1
                    ACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGT                                                                                                                       >  4:132484/1‑139
                     CTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGT                                                                                                                       <  6:116108/138‑1
                     CTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGT                                                                                                                       <  3:239347/138‑1
                     CTATTTACAGCGGCGCCATCGTCTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGAGCATGAGGTAGCGGTTTTGAACCCCACGGTTTCTTATATGTTGCTCCCCCCAGCAACCTTAAGAGTGTGTT                                                                                                                      >  2:213993/1‑139
                           ACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGCTCCCCGAAGCAAACTTAAGAGTGTGTTGATAGT                                                                                                                >  8:335947/1‑139
                              GCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCA                                                                                                             <  3:209270/139‑1
                               CGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAG                                                                                                            >  5:184540/1‑139
                               CGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAG                                                                                                            <  5:54290/139‑1
                               CGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAG                                                                                                            >  7:122643/1‑139
                                GGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGT                                                                                                                       >  1:324312/1‑127
                                 GCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTA                                                                                                          <  6:234780/139‑1
                                  CGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTAT                                                                                                         >  4:66556/1‑139
                                  CGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTAT                                                                                                         >  1:98609/1‑139
                                  CGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTAT                                                                                                         >  2:251091/1‑139
                                  CGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTA                                                                                                          >  7:89706/1‑138
                                  CGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAG                                                                                                                            >  1:163167/1‑120
                                  CGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAG                                                                                                                              <  6:359165/118‑1
                                  CGCCATCTACTGATGTAGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTAT                                                                                                         >  4:276036/1‑139
                                           CTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATT                                                                                                <  8:306020/139‑1
                                              ATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTG                                                                                             >  3:3636/1‑139
                                                GTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCTAACTTAAGAGTGTGTTGATAGTGCTGTTGCTTAAATTTTTGTG                                                                                           >  6:91242/1‑139
                                                 TCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGA                                                                                                                    <  7:219236/113‑1
                                                 TCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGAACCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTAGATAGTGCAGTATCTTAAAATTTTGTG                                                                                           >  5:8727/1‑138
                                                   GTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTA                                                                                         >  8:239571/1‑138
                                                   GTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAG                                                                                                                              <  1:194959/101‑1
                                                   GTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       >  3:174752/1‑92
                                                    TAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  1:229406/91‑1
                                                             TGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  8:211158/82‑1
                                                                   ATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGT                                                                         >  1:65278/1‑138
                                                                            TATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAG                                                                                                                              <  2:36940/76‑1
                                                                                 TTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTA                                                           >  6:42111/1‑138
                                                                                 TTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTA                                                           >  2:80478/1‑138
                                                                                 TTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTT                                                                                              >  3:268293/1‑103
                                                                                 TTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       <  3:110821/62‑1
                                                                                  TGCAGGATCATGAGGTAGCGTTTTTGAACACCACGCTATCTAATATGTTGATCCCCGAAGCAATCTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAA                                                          >  1:386254/1‑138
                                                                                  TGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAA                                                          >  2:123748/1‑138
                                                                                  TGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAG                                                                                                                              <  3:333764/70‑1
                                                                                  TGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAA                                                                                                                               >  1:1000/1‑69
                                                                                  TGCAGGATCATGAGGGAGCGTTTTTGAACACCACGATATCTAATATGTTGATCACCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAA                                                          >  3:142494/1‑138
                                                                                   GCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAA                                                         >  7:251195/1‑138
                                                                                         TCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTG                                                   >  6:199767/1‑138
                                                                                         TCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAG                                                                                                                              >  2:280278/1‑63
                                                                                         TCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGC                                                                                                                                       >  6:298521/1‑54
                                                                                            TGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAG                                                                                                                              >  7:60681/1‑60
                                                                                              AGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATT                                              >  5:216540/1‑138
                                                                                                GTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATT                                              >  4:190207/1‑136
                                                                                                 TAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTAT                                                                                        <  7:380778/93‑1
                                                                                                   GCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAG                                        >  4:423513/1‑139
                                                                                                   GCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAG                                        >  4:247743/1‑139
                                                                                                   GCGTTTTTGAACACCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAG                                        >  6:267913/1‑139
                                                                                                     GTTTTAGAACACCACGATATATAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGA                                      <  8:123538/139‑1
                                                                                                                CCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCA                           <  4:334562/139‑1
                                                                                                                CCACGATATCTAATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCA                           <  2:338149/139‑1
                                                                                                                           AATATGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTC                >  6:61367/1‑139
                                                                                                                               TGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATTTTGGTATTCCAA             <  8:365448/138‑1
                                                                                                                               TGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAA            >  7:154873/1‑139
                                                                                                                               TGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAA             <  8:423385/138‑1
                                                                                                                               TGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAA             <  8:151404/138‑1
                                                                                                                               TGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAA             <  7:287620/138‑1
                                                                                                                               TGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAA             <  5:345738/138‑1
                                                                                                                               TGTTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAA             <  3:301936/138‑1
                                                                                                                                 TTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATG          >  8:7193/1‑139
                                                                                                                                 TTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATG          >  3:4314/1‑139
                                                                                                                                 TTGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATG          >  5:375842/1‑139
                                                                                                                                  TGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAATATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGC         >  6:141781/1‑139
                                                                                                                                  TGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGC         >  7:352780/1‑139
                                                                                                                                  TGATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGC         >  1:291592/1‑139
                                                                                                                                   GATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGC         <  5:123371/138‑1
                                                                                                                                    ATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGTAGGGATTCTTCATGTTGGTATTCCAAATGCG        >  7:18848/1‑138
                                                                                                                                    ATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGCG        >  6:390380/1‑138
                                                                                                                                    ATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGCG        >  4:39149/1‑138
                                                                                                                                    ATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGCG        >  5:314922/1‑138
                                                                                                                                    ATCCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGC         >  4:220519/1‑137
                                                                                                                                    ATCCCCGAAGCAAAATTAAGAGTGTGTTGATAGTGCAGTATATTAAAATTTTGTGTATAATAGGATTTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGCG        >  1:355309/1‑138
                                                                                                                                      CCCCGAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGCG        >  3:3927/1‑136
                                                                                                                                                                                                                                                                                    
GAACTATTGATGCTGGGGATACTATTTACAGCGGCGCCATCTACTGATGTCGTAAAGGATTTGCAAGATAAAGTTATATCATTGCAGGATCATGAGGTAGCGTTTTTGAACACCACGATATCTAATATGTTGATCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  pSIJ663_pHT315_araE_xy/2517‑2654
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAGCAAACTTAAGAGTGTGTTGATAGTGCAGTATCTTAAAATTTTGTGTATAATAGGAATTGAAGTTAAATTAGATGCTAAAAATTTGTAATTAAGAAGGAGGGATTCGTCATGTTGGTATTCCAAATGCGTAATGT  >  pSIJ663_pHT315_araE_xy/2658‑2795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.