| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | pSIJ663_pHT315_araE_xy | = 5551 | 29 (0.000) | 9831 (1.040) | 198/222 | NT | 99.7% | intergenic (+820/–) | ampR/– | –/– |
| ? | pSIJ663_pHT315_araE_xy | 9889 = | NA (NA) | intergenic (+5158/–) | ampR/– | –/– | |||||
Only 100 of 11453 total aligned reads displayed.
TTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > pSIJ663_pHT315_araE_xy/5409‑5551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgtGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAAGCATTATGATTGGAGGAGTT > pSIJ663_pHT315_araE_xy/9889‑10026 tatcggCCTGTCGGGGTTCGCCACCTCTGACTTGAGCGGCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCAC < 3:43395/132‑1 TATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGGGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCCACAACGCGGCCATTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTAACA > 5:365206/1‑139 TATAGTCCTGGCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCGTTTGCTGGCCTTTTGCTCAC < 6:81615/138‑1 GTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTAACATGTG > 8:41771/1‑139 GTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTGTTTACGGTTCCTGGCCTTTTGCTGGGCTTTTTCTCACATGTG > 6:370732/1‑139 GTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTAAGGAAAAACGCCAGCCACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTG > 3:373528/1‑139 GTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGAGTTTTGTGCTGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTGAGATGTG > 2:266152/1‑139 CTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTTTGATGGTCGTCACGGGGGCGGCGCCTATGGTAAAACGCCAGCCACGCGGCCTTTTTACGGTAACTGGCCGTTTGCTGGCCTTTTGCTCACATGTGCGG > 5:115359/1‑139 CTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGGCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCGTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGG < 6:194614/139‑1 CTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGAGTTTTGTGATTCTCGGCAGGGGGGCGGAGCCGATGGAAAAACGCCCCCAACGCGGCCTTTTTAACGTTCCTGGGCTTTTGCTGGCCATTTGCTCACATGTGCGG > 4:132481/1‑139 TCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGG > 7:416364/1‑139 TCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGG > 8:190368/1‑139 TCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGG > 3:34684/1‑139 TTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTT > 7:354984/1‑139 TTCGCCACCTCTGACTTGAGCGGCGATTTTTGTGTTGCTCGTCTGGGGGGCGTAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTG < 2:188688/139‑1 gCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGG < 4:31943/138‑1 TCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGG > 4:215349/1‑139 CGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCACGGGGGCGGAGCCTATGGAAAAACGCCAGCACCCCGGCCGTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTGACATGTGCGGCGGGGCTTGGC > 8:279447/1‑139 acgTCTGACTTGCGCGTCGATTTTTGGGAGGATCGTCAGGGGGGGGTAGCCTATGCAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCT < 1:130563/136‑1 ACCTCTGCCGTGAGCGGCGATTTTTGTGATGCTCGTCTGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTGCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCGTGGCGGCT < 1:312700/139‑1 ACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCT < 7:62261/139‑1 ACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCT < 2:148028/139‑1 ACCTCTGACTTGAGCGTAGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCT < 4:84114/139‑1 ctaTGACTTGAGCGTCGATTTTTGTGAGGCTCGTCCGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTA < 6:269442/136‑1 CTCTGCCTTGAGCGTCGATGTTTGTGATGCTCGTCAGGGGGGCGGAGCCCAGGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTA < 2:96996/139‑1 CTCTGACTTGTGGGTCGATTTTTGTCTTGCTCGTCTGGGGGGGGGAGCCTTGGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTA < 1:194169/139‑1 CTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTA < 6:232923/139‑1 tCTTGAGCGTCGATTTTTGGGAGCCTCGTCAGGGGGGCGTTGCCTATGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGT < 2:233317/137‑1 ACTTGATCGTCGATTTTTGTGATGCTCGTCTGGGGGTCGTAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTAAGGGTCCTGGCCTTTTGCTGGGCTTTTGCTCACATGTGCGGAGGGGCTTGGCGTCTTATTGT < 1:225780/138‑1 ACTTGAGCGTCGTTTTTTTGGATGCGGGGGCGGGGGGCGTAGCCTATGCAAAAACGACAGCAACGAGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTTTTGTA < 1:160381/139‑1 ACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTA > 5:335823/1‑139 ACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGT < 1:402774/138‑1 ACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGT < 5:188248/138‑1 ACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGT < 1:52694/138‑1 ACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGT < 8:345377/138‑1 ACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGT < 3:401554/138‑1 ACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGT < 3:320344/138‑1 ACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGT < 3:151047/138‑1 ACTTGAGCGGGGATTTTTGTGATGCTGGGCAGGGGGGGGGAGCCTATGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGT < 6:307378/138‑1 CTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTA < 4:407540/138‑1 AGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCT > 3:235919/1‑139 ggtATTTTTGGGATGGTGGTCCGGGGGGCGGAGCGTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGGTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGA < 1:343214/136‑1 gcgcTTTTTGGGATGCCGGGCAGGGGGGGGGAGCCTATGGAAAAACGCCACCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGA < 3:71253/135‑1 GATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACA < 3:292769/139‑1 ATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACAC > 7:324361/1‑139 CGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGT > 4:103278/1‑139 CGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGT > 2:11278/1‑139 CGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGT > 4:346732/1‑139 CGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGT > 7:111274/1‑139 CGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGT > 7:201814/1‑101 CGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCT < 7:172967/95‑1 CGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCT < 4:374422/95‑1 ggcAAACACGCCAGCAACGCGGCCTTTTTCCGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTAGGGCTAGGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGA < 7:385759/134‑1 gGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGGGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGA < 8:156952/136‑1 TGGAAAAACGCCAGCCACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGA < 1:252760/137‑1 TGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAA < 3:204423/138‑1 TGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGA < 3:176418/137‑1 TGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGA < 7:90581/137‑1 TGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGA < 7:260336/137‑1 TGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGA > 6:147166/1‑137 GAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGA < 2:66576/139‑1 AAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGAT < 1:79954/139‑1 AAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGAT < 4:183626/139‑1 AACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTt > 5:271207/1‑138 AACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTA > 8:247850/1‑139 CGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCTGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATA < 1:100104/139‑1 CGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATA < 2:335323/139‑1 CGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTAT > 5:8631/1‑138 CGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGGGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATA < 8:216379/139‑1 GCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCC > 8:381398/1‑139 CGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAG < 2:293593/139‑1 CGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAG < 5:412485/139‑1 CGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAG < 8:31495/139‑1 CGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAG < 4:287426/139‑1 CGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAG < 8:64705/139‑1 CGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTC > 3:125275/1‑139 CGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCA > 6:170128/1‑90 ACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGG < 1:369844/138‑1 GTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACA > 3:26585/1‑72 CCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACT > 5:166008/1‑139 TTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTAATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATT > 6:337465/1‑138 TTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGG > 5:307793/1‑64 TTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGT < 5:211696/49‑1 TTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGC < 4:159556/42‑1 TTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTG > 4:52248/1‑36 GCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCA < 2:411870/138‑1 GCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCA < 7:230408/138‑1 GCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCGTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCA < 5:57324/138‑1 CTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAA < 5:144144/138‑1 GCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTG > 6:115525/1‑126 CCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAAGCATT < 6:47847/139‑1 TTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAAGCATTATGA > 4:254592/1‑139 TTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTGTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACGTGTCATTTCAAGCATTATGA > 8:126444/1‑139 GCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAAGCATTATGAT < 5:387242/138‑1 GCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAAGCATTATGAT < 6:398975/138‑1 TCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAAGCATTATGATTG > 1:278934/1‑138 actTGTGCGGCGGGGCTTGGCGGCTTATTGTAGGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAAGCATTATGATTGGAG < 5:241628/136‑1 ACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAAGCATTATGATTGGAG < 7:291791/139‑1 CATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGG < 7:141451/58‑1 CATGTGCGGCGGGGCTTGGCGGCGTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTGTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCGAGCATTATGATTGGAGG > 2:369460/1‑139 TTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > pSIJ663_pHT315_araE_xy/5409‑5551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgtGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAAGCATTATGATTGGAGGAGTT > pSIJ663_pHT315_araE_xy/9889‑10026 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |