| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | BS168_reference_genome | = 2411050 | 57 (0.890) | 44 (0.010) | 19/232 | NT | 43.6% | intergenic (‑461/‑36) | fmnP/serA | FMN permease/3‑phosphoglycerate dehydrogenase |
| ? | pSIJ663_pHT315_araE_xy | 9781 = | NA (NA) | intergenic (+5050/–) | ampR/– | –/– | |||||
Only 100 of 117 total aligned reads displayed.
GTTGGCTGTATAGAGAATTGCTTCAAATTAAATATATTACCTGCAAGCTGTCAGATCATTGATTTATTAGGCTTTACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACTTATTGAATCAGACTTTATTGAAATCGTTCAAAAAAACGTAGCAGATG > BS168_reference_genome/2410913‑2411185 | ttcgtttgaaatcatcgctgacgtttggaaaaacagataacagctataaaaaaagcaatgtagcggggagacccatacattgcttTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCagt < 6:53325‑M1/54‑2 (MQ=255)ttcgtttgaaatcatcgctgacgtttggaaaaacagataacagctataaaaaaagcaatgtagcggggagacccatacattgcttTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGAGTGTTAAATTATCagt < 1:55789‑M1/54‑2 (MQ=255) tataGAGAATTGCTTCAAATTAAATATATTACCTGCAAGCTGTCAGATCATTGATTTATTAGGCTTTACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGt > 6:366212/1‑139 (MQ=255) tataGAGAATTGCTTCAAATTAAATATATTACCTGCAAGCTGTCAGATCATTGATTTATTAGGCTTTACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGt > 1:270672/1‑139 (MQ=255) agaATTGCTTCAAATTAAATATATTACCTGCAAGCTGTCAGATCATTGATTTATTAGGCTTTACTTTTATCCTTTACTGCGTCATTACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGt > 3:200605/1‑138 (MQ=255) agaATTGCTTCAAATTAAATATATTACCTGCAAGCTGTCAGATCATTGATTTATTAGGCTTTACTTTTATCCTTTACTGCGTCATTACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGt > 3:193757/1‑138 (MQ=255) aaTTGCTTCAAATTAAATATATTACCTGCAAGCTGTCAGATCATTGATTTATTAGGCTTTACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCaa > 5:165789/1‑139 (MQ=255) aaTTGCTTCAAATTAAATATATTACCTGCAAGCTGTCAGATCATTGATTTATTAGGCTTTACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCaa > 5:186067/1‑139 (MQ=255) tGCTTCAAATTAAATATATTACCTGCAAGCTGTCAGATCATTGATTTATTAGGCTTTACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAAtt > 3:277927/1‑138 (MQ=255) cTTCAAATTAAATATATTACCTGCAAGCTGTCAGATCATTGATTTATTAGGCTTTACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTag > 3:6054/1‑139 (MQ=255) ttACCTGCAAGCTGTCAGATCATTGATTTATTAGGCTTTACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGAt < 4:407366/139‑1 (MQ=255) cTGTCAGATCATTGATTTATTAGGCTTTACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTAt < 2:270672/139‑1 (MQ=255) cTGTCAGATCATTGATTTATTAGGCTTTACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTAt < 4:193757/139‑1 (MQ=255) tCAGATCAGTGATTTATTAGGCTTTACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTGTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAAGTTAGGAGGAAATCTATCGATGTTTCGAGTATTgg > 3:245244/1‑139 (MQ=255) gATCATTGATTTATTAGGCTTTACTTTTATACTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGtct < 4:250278/139‑1 (MQ=255) cATTGATTTATTAGGCTTTACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGtct > 1:200810/1‑136 (MQ=255) ttGATTTATTAGGCTTTACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGTAAATCTAACGATGTTTCGAGTATTGGTCTCAGa > 1:151149/1‑138 (MQ=255) ttaGGCTTTACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAAc > 2:345484/1‑106 (MQ=255) ttaGGCTTTACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAAc < 1:345484/106‑1 (MQ=255) cTTTACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAac > 2:113804/1‑138 (MQ=255) tttACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAacga > 3:54950/1‑139 (MQ=255) ttACTTTTATCATTTACTGCGTCAATACACTTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGTAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAacga < 4:342543/138‑1 (MQ=255) tACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAacgacg > 7:394830/1‑139 (MQ=255) tgctttttactgcGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattc > 5:383876‑M1/6‑58 (MQ=255) tgctttttactgcGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattc > 7:249172‑M1/6‑58 (MQ=255) tgctttttactgcGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattc > 7:64979‑M1/6‑58 (MQ=255) tgctttttactgcGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattc > 7:344251‑M1/6‑58 (MQ=255) tgctttttactgcGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgt < 6:326251‑M1/118‑66 (MQ=255) tgctttttactgcGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgt > 5:326251‑M1/6‑58 (MQ=255) tCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACa < 7:92859/138‑1 (MQ=255) ctttttactGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaattgaagaatactccaactcaattagaacctaatgttcctgtaacaagaagccattcaat > 6:47883‑M1/4‑56 (MQ=255) ctttttactGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaat > 6:367979‑M1/4‑56 (MQ=255) cTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTAAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTACCGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGc < 6:88680/138‑1 (MQ=255) tttACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgg > 6:166788‑M1/1‑53 (MQ=255) tttACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgg > 5:48752‑M1/1‑53 (MQ=255) ttACTGCGTCAATACACTTTGACAATCTTTTGTTAATTTTTAAAATTATAATATTTTTAGTTTTTCAATTTTGGAGGAAATCTAACGATGTTTGTAGTATTGGTCTCAGAAAAAATGAGCCACGACGGTTTACAGCCa < 2:200810/138‑1 (MQ=255) TACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACTGCCACt < 6:90900‑M1/139‑1 (MQ=255) TACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACt < 6:204708‑M1/139‑1 (MQ=255) TACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACt < 2:13595‑M1/139‑1 (MQ=255) TACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACt < 7:6015‑M1/139‑1 (MQ=255) cTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAacga < 7:385414/122‑1 (MQ=255) cTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACTTa < 1:113804/139‑1 (MQ=255) cGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCa > 4:300470/1‑132 (MQ=255) cGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACTTAtt > 8:321393/1‑138 (MQ=255) cGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGAAACGAAGGTTTACAGCCACTTAtt > 6:205160/1‑138 (MQ=255) cGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgt > 1:183387‑M1/1‑46 (MQ=255) cGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttg < 5:166788‑M1/137‑92 (MQ=255) cGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatggcatttgt > 3:313234‑M1/1‑46 (MQ=255) aaTACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACTTATTGAATc < 7:321393/139‑1 (MQ=255) tACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttg < 8:64979‑M1/139‑100 (MQ=255) tACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttg < 6:117336‑M1/139‑100 (MQ=255) ctcgtTGACACTGTTTTTATATTTTTTTTAATTATCAGtgaaatgaatgtaattattttaaaattaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgat < 2:355952‑M1/137‑102 (MQ=255) cacGTTGACACTATTTTGAAAGTGTTTTAAATTATCAGtgacattaaaggaagtattttaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgat < 6:48752‑M1/139‑102 (MQ=255) cGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatct > 5:140936‑M1/1‑36 (MQ=255) cGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatct > 5:170227‑M1/1‑36 (MQ=255) cGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatc > 6:267350‑M1/1‑36 (MQ=255) gTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctc < 4:314622‑M1/139‑105 (MQ=255) gTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatct > 8:308788‑M1/1‑35 (MQ=255) gTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatct > 6:18103‑M1/1‑35 (MQ=255) gTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgatcctgtaacaagaagccattcaatgggatttgtcattttgatct > 7:389135‑M1/1‑35 (MQ=255) tGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctg > 8:315105‑M1/1‑33 (MQ=255) tGACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctg < 7:315105‑M1/97‑65 (MQ=255) gACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatg > 4:358319‑M1/1‑32 (MQ=255) gACACTCTTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagacattcaatgggatttgtcattttgatctcatg > 2:70499‑M1/1‑32 (MQ=255) ctctTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcg > 1:107901‑M1/1‑28 (MQ=255) tctTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccacctcaattagaaccaaatgttcctgtaacaagaagccattcaaggggatttgtcattttgatctcatgtgcgg > 2:45058‑M1/1‑27 (MQ=255) tctTTTGAAAGTGTGTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcgg > 2:94041‑M1/1‑27 (MQ=255) ttttGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCa > 8:43809/1‑111 (MQ=255) ttttGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACTTATTGAATCAGACTTTATTGAATTCg > 2:219734/1‑139 (MQ=255) ttttGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACTTATTGAATCAGACTTTATTGAAATCg > 4:188728/1‑139 (MQ=255) ttttGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACTTATTGAATCAGACTTTATTGAAATCg > 7:294515/1‑139 (MQ=255) atatGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACTTATTGAATCAGACTTTATTGAAATCGTTCaaaa > 3:168676/1‑138 (MQ=255) atatGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACTTATTGAATCAGACTTTATTGAAATCGTTCaaaa > 7:408032/1‑138 (MQ=255) gtgTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcggcggggcttggcg > 3:103825‑M1/2‑15 (MQ=255) gtgTTAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcggcggggcttggcg > 4:82727‑M1/2‑15 (MQ=255) atGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACTTATTGAATCAGAc < 8:316960/116‑1 (MQ=255) atGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACTTATTGAATCAGACTTTATTGAAATCGTTCaaaaaaa > 7:241557/1‑139 (MQ=255) atGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACTTATTGAATCAGACTTTATTGAAATCGTTCaaaaaaa > 7:235513/1‑139 (MQ=255) atGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACTTATTGAATCAGACTTTATTGAAATCGTTCaaaa > 7:15006/1‑136 (MQ=255) atGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACTTATTGAATCAGACTTTATTGAAATCGTTCaaaa < 8:15006/136‑1 (MQ=255) ttAAATTATCAGtgacatgtaaggtattatttgaaaatgtagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcggcggggcttggcggc < 8:308293‑M1/138‑127 (MQ=255) ttAAATTATAAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcggcggggcttggcggct < 8:220394‑M1/139‑128 (MQ=255) tAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcggcggggcttggcggct < 2:107901‑M1/138‑128 (MQ=255) tAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcggcggggcttggcggct < 8:305113‑M1/138‑128 (MQ=255) tAAATTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcggcggggcttggcggct < 5:9394‑M1/138‑128 (MQ=255) tAAATTATCAGtgacatgaaagcaattattttaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcggcggggcttggcggct < 6:140936‑M1/138‑128 (MQ=255) tAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACTTATTGAATCAGACTTTATTGAAATCGTTCAAAAAAACGt < 3:188728/138‑1 (MQ=255) tAAATTAACAGATATTTAGTTTTTAAATTTTCGAGGAAATATAACGATGTTTCGATTATTGGGCTCACACAAAATGAGCCACGACGGTTTACATCCACTTATTGAATCAGACTTTATTGAAATCGTTCAAAAAAACGt < 1:219734/138‑1 (MQ=255) aaaTTATCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcggcggggcttggcggctt < 5:367979‑M1/138‑129 (MQ=255) aaaTTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACTTATTGAATCAGACTTTATTGAAATCGTTCAAAAAAACGTAg < 8:423558/139‑1 (MQ=255) aaTTATCAGgcacatgaaaggaattattgtaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcggcggggcttggcggctta < 5:53325‑M1/138‑130 (MQ=255) aaTTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACTTATTGAATCAGACTTTATTGAAATCGTTCAAAAAAACGTAg < 8:6015/138‑1 (MQ=255) aTCAGtgacattaaagcaataatttaaaaatcaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcagcggggcttggcggcttattgt < 6:56989‑M1/138‑134 (MQ=255) aTCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcggcggggcttggcggcttattgt < 1:94041‑M1/138‑134 (MQ=255) aTCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcggcggggcttggcggcttattgt < 3:358319‑M1/138‑134 (MQ=255) tCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcggcggggcttggcggcttattgtat > 2:421238‑M1/1‑4 (MQ=255) tCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcggcggggcttggcggcttattgta < 5:74990‑M1/138‑135 (MQ=255) tCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcggcggggcttg > 7:65359‑M1/1‑4 (MQ=255) tCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgatctcatgtgcggcggggcttg < 8:65359‑M1/125‑122 (MQ=255) tCAGtgacatgaaaggaagtatttgaaaatgaagaatactccaactcaattagaaccaaatgttcctgtaacaagaagccattcaatgggatttgtcattttgacctcatgtgcggcggggcttggcggcttattgtat < 2:55789‑M1/139‑136 (MQ=255) | GTTGGCTGTATAGAGAATTGCTTCAAATTAAATATATTACCTGCAAGCTGTCAGATCATTGATTTATTAGGCTTTACTTTTATCCTTTACTGCGTCAATACACGTTGACACTCTTTTGAGAATATGTTAAATTATCAGATATTTAGTTTGTCAATTTAGGAGGAAATCTAACGATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCCACTTATTGAATCAGACTTTATTGAAATCGTTCAAAAAAACGTAGCAGATG > BS168_reference_genome/2410913‑2411185 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |